Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0269 ATGTCGTCTGGGGCTAGGACACCTCAGGAGATGGAGATTGAGGTTCAGGAAGAAAGTAAGACCCGTAATTTGAAGGGGACGACAAGTTTTAATGGCAGAGATAAGATTTTTAGAGCAGATAAGATTGATTTGAAAACCTTAGATATGCAATTGGAGAAGCACTTGAGCCGTGTTTGGTCGAGGAACTTAGAGATTGAGAGGCCAAAGGAAGAATGGGAGATTGATTTGTCTTTGCTCGATATTAAATATGTTTTAGCTCATGGCACGTATGGAACTGTCTACAAGGGTACTTATGATAGCCAAGATGTCGCAGTGAAGCTGTTGGATTGGGGGGAGGATGGAGTTGCTTCATCTTCTGAAACTTCTGCTCTGAGGGAATCATTTAAGCAAGAAGTTGCTGTTTGGCACAAACTTAGTCACCCTAATGTCACAAAATTTGTGGGAGCTTCAATGGGAACTTCAAATCTAAAGATTCCTTCAAAAAGCTCTTCAAGTGACGGTAATAATTCCTTACCTGCTAGGGCGTGCTGTGTTGTCGTGGAGTATCTCCCTGGCGGAACATTAAAACAATACTTGATTAGAAACAGGCGAAAGAAACTTGCGTTTAAGGTTGTCATCCAGCTTGCATTGGATCTTTCTAGAGGACTCAGCTATCTTCATTCACAGAAGATTGTCCATCGTGATGTGAAGACAGAAAATATGTTGTTAGATGGTCAGAGAACCCTAAAAATTGCTGATTTTGGAGTGGCTCGAGTTGAGGCTCAGAATCCGAGAGACATGACCGGTGAAACTGGGACTCTTGGATACATGGCTCCAGAGGTTCTTGATGGCAAACCTTACAATAGAAGATGCGATGTTTATAGCTTTGGAATCTGCTTGTGGGAAATTTACTGCTGTGATATGCCTTACCCGGATCTTAGCTTTGTTGATGTCTCATCTGCAGTTGTCAAACAGAACCTGCGACCTGAGGTCCCAAGATGCTGTCCGAGTTCCTTGGCGAGCATTATGCGGAAATGTTGGGATTCAAATGCAGATAAGCGGCTGGAAATGGATGAGGTGGTGAAAATGTTGGAAGCAATCGATACAAGCAGAGGAGGTGGGATGATTCCGGAAGACCAGCAGACCGGTTGTTTATGTTTCGCCCCTGCCCGTGGGCCTTAA 1161 44.1 MSSGARTPQEMEIEVQEESKTRNLKGTTSFNGRDKIFRADKIDLKTLDMQLEKHLSRVWSRNLEIERPKEEWEIDLSLLDIKYVLAHGTYGTVYKGTYDSQDVAVKLLDWGEDGVASSSETSALRESFKQEVAVWHKLSHPNVTKFVGASMGTSNLKIPSKSSSSDGNNSLPARACCVVVEYLPGGTLKQYLIRNRRKKLAFKVVIQLALDLSRGLSYLHSQKIVHRDVKTENMLLDGQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFVDVSSAVVKQNLRPEVPRCCPSSLASIMRKCWDSNADKRLEMDEVVKMLEAIDTSRGGGMIPEDQQTGCLCFAPARGP 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1118657 1120518 - Conep07aG0027400.1 Cone7ag0269 440865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0269 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 358 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Cone7ag0269 386 FunFam Serine/threonine-protein kinase HT1 183 368 - -
Cone7ag0269 386 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
Cone7ag0269 386 SUPERFAMILY Protein kinase-like (PK-like) 61 357 IPR011009 -
Cone7ag0269 386 Gene3D Transferase(Phosphotransferase) domain 1 183 373 - -
Cone7ag0269 386 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 FunFam Kinase suppressor of Ras 1 68 162 - -
Cone7ag0269 386 SMART serkin_6 79 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Cone7ag0269 386 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0269 386 MobiDBLite consensus disorder prediction 1 25 - -
Cone7ag0269 386 CDD STKc_MAP3K-like 85 357 - -
Cone7ag0269 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0566 Cone-Chr17:2904712 Cone7ag0269 Cone-Chr7:1118657 2.50E-173 dispersed
Cone2ag0900 Cone-Chr2:34824127 Cone7ag0269 Cone-Chr7:1118657 3.78E-187 dispersed
Cone3ag1395 Cone-Chr3:32854304 Cone7ag0269 Cone-Chr7:1118657 7.92E-97 dispersed
Cone7ag0269 Cone-Chr7:1118657 Cone7ag1915 Cone-Chr7:12257561 1.24E-60 dispersed
Cone20ag0852 Cone-Chr20:6216207 Cone7ag0269 Cone-Chr7:1118657 8.87E-107 wgd
Cone4ag0260 Cone-Chr4:1162492 Cone7ag0269 Cone-Chr7:1118657 5.71E-259 wgd
Cone5ag0529 Cone-Chr5:2234623 Cone7ag0269 Cone-Chr7:1118657 1.19E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82998 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0269 - - - 0.0