Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0273 ATGGGTAACGCAGATTGTGAGTGCGCTCCCCGAGTTCCAATTCCTCAATCCAAAACGTTCTGCCAGTCCTTCAAATCTAATCTCAAAGAAACTTTCTTTGCCGACGACCCTTTCCGGCAGTTCAAGAAGCAGCCTCTGTCGCAAAAACTCGTACTCAGCCTGAGATATTTCGTCCCCTTCTTCAAATGGACTCCTCAATATACCCTCGACTTCTTGAAGTCCGATCTTATAGCTGGAATTACCATAGCAAGCTTAGCAGTTCCTCAAGGGATAAGTTACGCTAATTTGGCTAATTCGAGCTTTGTGCCGCCATTGATATATGCTATGTTGGGAAGCTCCAAGGATTTGGCAGTGGGGACAGTAGCTGTCGTGTCACTGTTCATGTCTGACGTGTTAGGCAAAAAGATTGACCCTGTGACGCACAGTGACCAATATGTTCAATTGGTTTTCAAGGCCACGTTTTTCGCTGGAGTCATGCAATCGGCTCTTGGCTTCTTGGCTCTTGGCTCTTGGCTCTTGGCTCTTGGCCACAGCAAGAAAAAACCATCCTTCTTCTGGATATATGCATTGGCACCTTTGGTCTCTGTCATTTTGGCAAGCCTTCTAGTCTTTCTCACCCACGCCGAAAAGCATGGAGTACAAGTGATTGGGCATCTGAAAAAAGGCTTGAATCCGCTATCATTAAAAGACCTCGCTTTTGGATCTCCATATCTGTCTACAGTCATTAAGACCGGCTTCATCACTGGCATCATTGGCCTTGCTGAAGGAGCAGCTGTCGGAAGAAGTTTCGCTGCGGTTAAGAACTACCACATTGATGGCAACAAAGAAATGATAGCTTTCGGCATGATGAATATTGTTGGCTCCTGCACTTCTTGCTACTTAACTTCAGGACCGTTTTCCCGAACGGCAGTTAACTTCAACGCAGGCAGCAAAACTGCAGTTTCGAACATAGTGATGGCAATCGCAGTGATGCTCACCCTTTTGTTATTGACCCCATTTTTCCATTACACTCCTCTTGTGGTCCTATCCGCTATCATTATCACAGCCATGCTTGGCCTCATCAAATATGAATCTGTCATCCACCTTTGGAAAATCGACAAATTCGATTTCACCATTTGCCTTTCGGCTTATACCGGCGTCGTCTTTGACAATGTCGAAACCGGCCTAATCAAATACAAACTTTTTATTTATAGGGTGGCGCTTTCAATTTTGAGGCTGCTGTTATCAATTTCAAGGCCTAAGACTCTGGTTTTAGGGAATATTCCAAATTCTGCAATCTACGGAAGCATCGATCAGTACCCGAGTGCTAATACCGTTCCCGGGATTCTGATTCTTCAAATTGAGGCATCTATTTATTTTGCCAATGCAAATTACCTAAGGGAAAGGATATGA 1392 44.68 MGNADCECAPRVPIPQSKTFCQSFKSNLKETFFADDPFRQFKKQPLSQKLVLSLRYFVPFFKWTPQYTLDFLKSDLIAGITIASLAVPQGISYANLANSSFVPPLIYAMLGSSKDLAVGTVAVVSLFMSDVLGKKIDPVTHSDQYVQLVFKATFFAGVMQSALGFLALGSWLLALGHSKKKPSFFWIYALAPLVSVILASLLVFLTHAEKHGVQVIGHLKKGLNPLSLKDLAFGSPYLSTVIKTGFITGIIGLAEGAAVGRSFAAVKNYHIDGNKEMIAFGMMNIVGSCTSCYLTSGPFSRTAVNFNAGSKTAVSNIVMAIAVMLTLLLLTPFFHYTPLVVLSAIIITAMLGLIKYESVIHLWKIDKFDFTICLSAYTGVVFDNVETGLIKYKLFIYRVALSILRLLLSISRPKTLVLGNIPNSAIYGSIDQYPSANTVPGILILQIEASIYFANANYLRERI 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1141534 1144830 - Conep07aG0027800.1 Cone7ag0273 440869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0273 463 ProSiteProfiles STAS domain profile. 432 463 IPR002645 -
Cone7ag0273 463 PANTHER SULFATE TRANSPORTER 178 463 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone7ag0273 463 Gene3D STAS domain 412 463 IPR036513 -
Cone7ag0273 463 Pfam Sulfate permease family 72 172 IPR011547 GO:0016020(InterPro)
Cone7ag0273 463 Pfam Sulfate permease family 178 375 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0273 Cone-Chr7:1141534 Cone7ag1578 Cone-Chr7:10808977 2.04E-147 dispersed
Cone18ag0634 Cone-Chr18:3289773 Cone7ag0273 Cone-Chr7:1141534 1.15E-191 wgd
Cone4ag0266 Cone-Chr4:1188017 Cone7ag0273 Cone-Chr7:1141534 6.07E-273 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0273 K17471 - cit:102622416 567.0