Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0283 ATGCCTATAAGGCAGATGAAAGAGAGCTCAGAGCAGCACCTAGTAATCAAAACCCACTTTCAAAACTCTGTGAACAACAACCCTGTTCAGAAAGCACCCAAAACTGCCCAAAATGGAAAAGGCCCACCTCATCAAGAAGCCCAGAACACAAAGACTTCTCCTCCTATGAAAAACAGGGGAAGAAGGCGAGGAAGAGGTGGCCGGAAATCCGATCAAGGTGGTGGTGATGTTTGTCTCCGGCCTAGTTCCAGGCATTGCACCATGGTGAATAAACCTATAACCCGAGAAAGTACCACCCCAGACGGGTCTGTGGAAAATGGATACAGTTTGTGTGAAGTAGAAATGGGTTTTCCTAATTCAAGCAAATCTTTGAACTTTGCACCCAGGCCTGGGTTCGGGCAAGTTGGGACTAAGTGTATCGTGAAGGCTAACCATTTCTTGGCAGAGTTGCCAGAGAAAGACTTGAATCAATACCATGTAACAATAACTCCTGAAGTAGTATCAAGAACTATGAACCGAGCAATCATGGCTGAGTTAGTGAGGCTATACAGAGAGTCTGATTTAGGAATGAGATTACCTGCTTATGATGGTCGAACGAGTTTGTACACTGCTGGGGAGCTTCCATTTGTTTCCAAGGTGCTCAACATTAAGCTTGTAGATGAGGATGGAATGAACGGTAGCAAGAGGGAAAGAGAATATAAGGTGGCTCTGAAATTTGTTGCTCGGGTCAACTTGCATCATTTGGGCCAGTTCTTGGCTGGTAAGCGAGCTGATGCTGCACAAGAGGCTCTTCAAGTACTTGATATCGTACTAAGAGAGCTTTCATCAAAAAGGTACTGCCCCGTTGGGAGATCCTTCTTTTCTCCTCATATAAAGTCTCCTCATCATCTTGGTGATGGGTTGGAGTCTTGGTGTGGATTTTATCAGAGTATTAGGCCAACTCAGATGGGCCTGTCTTTGAATATCGATATGGCTTCAGCTGCCTTTATTGAGCCTCTGCCCGTAATTGAGTTTGTAGGCCAGCTTCTGGGGAAAGATGTTTTGTCGAGGCCATTATCTGATTCTGATCGTGTAAAGATTAAGAAGGCCCTTAGAGGAGTGAAAGTTGAAGTTACTCACAGAGTTAATGTACGAAGAAAGTACCGTGTTTCAGGGTTGACATCTCAACCTACTAGAGAACTAGTTTTCCCTGTGGATGATGATTCAACTATGAAATCTGTAGTAGAGTACTTTGAGGAGGAATATGGCTTCACTATTCAACATGCGCATCTCCCTTGCCTTCAAGTTGGAAATCAGAAGAAGGCAAATTATTTACCTATGGAGGCATGCAAAATTGTTGAAGGGCAGCGGTATACTAAAAGGCTGAACGAGAGACAAATTACTGCCTTATTAAAAGTTACGTGCCAAAGGCCTAGGGACCGTGAAAATGACATTCTACAGACTCTACAGCATAATTCCTATGATCAAGATCCATATGCAAAGGAGTTTGGTATTAAAATCAGTGAAAAAATGGCTTCCGTTGAGGCCCGAATCTTACCTCCTCCCTGGCTTAAATATCATGATACTGGAAAAGAAAAGGATTGTCTCCCTCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATAGATGGGATGACTGTAAACCATTGGGCTTGTATTAACTTCTCTAGGAGTGTTCAAGAGAGCATTGCTCGTGGTTTTTGTAATGAACTTGCTCAAATGTGTCAAGTCTCTGGAATGGAATTCAATCCAGATCCTGTAATTCCAATCTACAATGCGAAGCCTGAGCAAGTGGAAAAAGCCTTAAAGCATGTGTATCATGCTTCTATGAACAAAACCAAAGGAAAAGAGTTGGAGTTATTGTTAGCTATTTTGCCCGACAATAATGGATCACTTTATGGCGATCTCAAGCGAATTTGCGAAACCGATCTTGGTATAATCTCCCAATGTTGTCTTACGAAACATGTCTTTAAAATCAGCAAACAGTACCTGGCTAATGTGTCGTTGAAAATCAATGTTAAGATGGGTGGTAGAAACACAGTTCTTCTAGATGCTATTAGCTGCAGAATACCATTAGTGAGCGATATTCCAACCATTATTTTTGGAGCTGATGTTACCCACCCAGAGAATGGAGAAGATTCTAGCCCTTCTATAGCCGCTGTAGTTGCCTCACAAGATTGGCCGGAAGTTACAAAATATGCCGGATTGGTCTGTGCTCAAGCTCACAGACAGGAACTCATACAAGACTTGTATAAAACTTGGCAAGATCCCGTTCGTGGCACTGTTAGTGGTGGTATGATCAGGGATCTTCTTGTTTCCTTTAGAAAGGCAACGGGGCAAAAACCATTAAGGATAATATTTTACAGGGACGGAGTAAGTGAAGGACAGTTTTATCAAGTTTTGCTTTATGAGTTGGATGCAATAAGGAAGGCTTGTGCTTCACTAGAACCGAATTATCAACCGCCTGTGACCTTCATCGTGGTACAAAAACGGCATCATACCCGACTCTTTGCTAACAACCATAGAGACCGGAGCAGCACAGATAAGAGCGGGAATATATTGCCTGGAACTGTGGTTGATTCTAAGATATGCCATCCTACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGTATTCAGGGTACAAGCCGGCCGGCTCACTACCATGTTCTTTGGGACGAGAACAATTTTACTGCAGATGGAATCCAGTCGCTGACAAACAACCTCTGTTACACCTATGCAAGATGTACACGTTCTGTTTCTGTTGTCCCTCCGGCATATTATGCACACTTAGCTGCTTTCCGAGCTCGATTCTACATGGAACCAGAAAATCAAGAGAATGACTCTAGCGGTCACACTATGAAGAAAACAAGAGGAGCAAGGGAAACCGGAGTTCGCCCATTGCCAGCTTTGAAGGAAAATGTAAAGAGAGTAATGTTTTATTGTTAA 2952 42.89 MPIRQMKESSEQHLVIKTHFQNSVNNNPVQKAPKTAQNGKGPPHQEAQNTKTSPPMKNRGRRRGRGGRKSDQGGGDVCLRPSSRHCTMVNKPITRESTTPDGSVENGYSLCEVEMGFPNSSKSLNFAPRPGFGQVGTKCIVKANHFLAELPEKDLNQYHVTITPEVVSRTMNRAIMAELVRLYRESDLGMRLPAYDGRTSLYTAGELPFVSKVLNIKLVDEDGMNGSKREREYKVALKFVARVNLHHLGQFLAGKRADAAQEALQVLDIVLRELSSKRYCPVGRSFFSPHIKSPHHLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVGQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRVNVRRKYRVSGLTSQPTRELVFPVDDDSTMKSVVEYFEEEYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPRDRENDILQTLQHNSYDQDPYAKEFGIKISEKMASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMIDGMTVNHWACINFSRSVQESIARGFCNELAQMCQVSGMEFNPDPVIPIYNAKPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGIISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPENQENDSSGHTMKKTRGARETGVRPLPALKENVKRVMFYC 983
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1195885 1201268 - Conep07aG0029000.1 Cone7ag0283 440879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0283 983 SMART Piwi_a_2 621 942 IPR003165 GO:0003676(InterPro)
Cone7ag0283 983 Pfam Argonaute linker 2 domain 473 519 IPR032472 -
Cone7ag0283 983 Gene3D - 511 684 - -
Cone7ag0283 983 Pfam Piwi domain 622 941 IPR003165 GO:0003676(InterPro)
Cone7ag0283 983 SMART PAZ_2_a_3 337 469 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone7ag0283 983 Pfam PAZ domain 359 463 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone7ag0283 983 MobiDBLite consensus disorder prediction 41 55 - -
Cone7ag0283 983 FunFam protein argonaute 10-like 690 983 - -
Cone7ag0283 983 MobiDBLite consensus disorder prediction 944 964 - -
Cone7ag0283 983 Gene3D paz domain 326 451 - -
Cone7ag0283 983 ProSiteProfiles Piwi domain profile. 621 942 IPR003165 GO:0003676(InterPro)
Cone7ag0283 983 SUPERFAMILY Ribonuclease H-like 609 943 IPR012337 -
Cone7ag0283 983 FunFam Argonaute 10 511 684 - -
Cone7ag0283 983 SMART DUF1785_2 280 332 IPR014811 -
Cone7ag0283 983 MobiDBLite consensus disorder prediction 21 83 - -
Cone7ag0283 983 ProSiteProfiles PAZ domain profile. 334 447 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone7ag0283 983 SUPERFAMILY PAZ domain 327 487 IPR036085 GO:0005515(InterPro)
Cone7ag0283 983 CDD PAZ_argonaute_like 332 446 - -
Cone7ag0283 983 MobiDBLite consensus disorder prediction 949 963 - -
Cone7ag0283 983 FunFam Protein argonaute-2 326 452 - -
Cone7ag0283 983 Pfam Mid domain of argonaute 530 607 IPR032473 -
Cone7ag0283 983 CDD Piwi_ago-like 491 941 IPR045246 -
Cone7ag0283 983 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 969 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cone7ag0283 983 Pfam N-terminal domain of argonaute 138 271 IPR032474 -
Cone7ag0283 983 Gene3D - 690 983 IPR036397 GO:0003676(InterPro)
Cone7ag0283 983 Pfam Argonaute linker 1 domain 281 331 IPR014811 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0674 Cone-Chr2:32001583 Cone7ag0283 Cone-Chr7:1195885 0 dispersed
Cone16ag0768 Cone-Chr16:8640644 Cone7ag0283 Cone-Chr7:1195885 1.44E-104 transposed
Cone4ag0276 Cone-Chr4:1247320 Cone7ag0283 Cone-Chr7:1195885 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0283 K11593 - csv:101221352 1754.95