Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0285 | ATGACGGCTGACATTTTGCATGAACAATTCGACCGCATTCGGTATCTACTTGATGCCTCCAAAACAAACAGCAAACCAAACAAAAGATGGCAATTTGCTTTTCTCACTATCTACTGTTCGAGAGCTCTCTCGAATAGTTTATGGCAAAACAAAAAACCTCCTTTGCCTCCATCTTCGTCTTACACTAGCATCGACATTAGCTCCGAAAACGCCTTCAGAATAGACAAAACCACCCTCAGTGAACTCGTCAAGGATAAACATCTCAAAAAGCTTCAAGACATCCACAGTGGCGTCAACGGCATAGCTGCAGCCCTAAAAACAGATATGAATCACGGAATCAATGGTCAAGATGATCAAGACATAATCCTCCGACAGAAAGAATTTGGTTCCAATACGTACAAGAAGCCTCCCACAAAAAACTTCCTTCATTTCATTGTAGAAGCCTTTAAAGATCTCACCATCTTCATCCTTCTAGCGTGCGCCTCACTCTCCCTCGGATTCGGAATCAAGGAGCACGGCTTGAAAGAAGGATGGTATGATGGAGGAAGCATCTTCCTTGCAGTTTTCATAGTCATCATTTTCTCCGCAATAAGTAACTACAAACAGAACAGACAATTCAACAAGCTGTCCAAACTAAGCGACAACATCCAAATCGAGGTTGTAAGAAACGGAAGAAGACAAAACATCTCAATTTTTGATATCCTCGTCGGAGACATTGTCTGCTTGAAGATCGGAGATCAAGTTCCGGCAGATGGGTTGTTCTTAAATGGGCATTCATTACAAGTCGATGAATCAAGCATGACAGGTGAATCCGATCATGTAGAAATCAATCATGAAAACCAACCGTTTTTATTCTCCGGGACTAAAATCGCAGATGGGTATGGTCAGATGCTGGTCACTTGTGTCGGAATGAACACCACGTGGGGAGAGATGATGAGCTCGATAAGCCGTGATAATCACGAGATCACTCCGTTACAAGAGAGGCTAAACAAACTGACATCTTCAATCGGTAAGGTTGGTTTGACAGTTGCTTTTCTAGTTCTCATTGTTCTTTTGGTCCGTTATTTCACGGGAAACACGAAGGACGATAACGGAGTAAGAGAGTATAATGGGAAGCAGACGAGCAGTGATGATGTCATCAATGCCGTGATTGGGATCGTAGCTGCGGCTGTGACGATTGTCGTGGTGGCGATCCCGGAAGGTTTGCCATTAGCTGTCACTTTGACTCTTGCTTATTCTATGAAGAGAATGATGGGCGACAATGCTATGGTCCGGAAATTATCGGCTTGTGAAACTATGGGGTCTGCTACAACGATTTGTACTGATAAAACCGGCACGCTGACTTTGAACCAGATGAAGGTTACGAAGTTCTGGATCGGCACGGAATCTATGGAACAAGGTACTACTACTACTACTACTTCTACGTCCATAATTTCTTCGGATCTTCTAGAAACTATCCGCCAAGGAATTGCTGTTAATACAACTGGGAGTGTTTATTACAAGCCCAATTCATCGGGCCAGGCAGAAGTAGATATCACTGGTAGTCCAACCGAGAAAGCCATTCTATCATGGGCCGTGACAGAAATGAACATGAATATGGAGGAAATAACAAAGAATTGTGCTGTATTACATGTCGAGACATTCAATTCGCAGAAGAAACGGAGCGGTGTTCTAATCAGAAAGAACGTGGATAACACAATCCATGTCTATTGGAAAGGAGCAGCAGAGATGATTCTAGAAATGTGTTCAAGTTACTATGATGCTTCAGGCAATGTAAATGATTTGGGCGTTGTTGAAAAGATGAAAATTGTGAAGATCATTCAAGGTATGGCTGCTAGCAGTCTTAGATGTATAGCTTTTGCACACTCACAGGTTTCAGACTTTCAAACGGAGCAGAAGAAACAGATAAAAGAAAGCAACTTGATCCTATCAGGATTGGTCGGGATCAAGGACCCATGTAGGCCTGGAGTGAAAGAGGCAGTAGAAGCATGCCAATATGCTGGAGTAAAAATCAAAATGATTACAGGAGACAATATCTTCACAGCAAAAGCAATCGCCACAGAATCTGGGATTCTCCGCCTGAACCAGGATCTGAATGGAGCGGTCATAGAAGGTTCCGAATTCAGAAACTACACCCCAGAAGAAAGGTTGGAGAAAGTAGACAAAATCTGTGTGATGGCTAGATCCTCTCCGTTCGATAAACTTCTCATGGTGCAGTGCTTGAAACAGAAAGGCCACGTGGTTGCAGTTACAGGAGACGGGACGAACGATGCACCGGCTTTGAAAGAAGCAGATATCGGACTTTCTATGGGGATACAAGGGACAGAAGTGGCTAAAGAGAGCTCGGATATTGTCATATTGGACGACAATTTTTCATCGGTTGTTACGGTTTTGAAATGGGGAAGATGTGTTTATAACAACATTCAGAAGTTCCTCCAGTTCCAACTAACTGTCAATGTGGCTGCTCTTGTCATAAACTTTGTGGCTGCAGTTTCCGCCGGAGAAGTTCCCTTAACTGCCGTGCAGTTACTGTGGGTCAACCTGATAATGGATACATTGGGTGCTTTAGCTTTAGCCACAGAGCGCCCCACCAAGGAACTTATGGACAGTCCGCCCGTGGGCTGGACTGAGCCGCTCATAACCAACATCATGTGGAGGAACTTGCTGTTTCAGGCTTTGTATCAGGTAGTTGTCCTATTGACCTTACAGTTCAAAGGCGAATCGATTTTTGGGGTGTCTAAGGCGGTGAACGAGACCTTGATTTTCAATACCTTTGTGCTCTGCCAAGTGTTCAATGAGTTCAATGCTAGGAATCTTGAGAAGAAGAATGTGTTTAAAGGGATATTGAAGAACAAATTGTTTTTGGGGATCATAGTGTTTACCATTGTTCTTCAGATCATGATGGTGGAGTTTCTGAAAAAGTTTGCTGGTACAGAGAGGTTGAACTGGGGTCAATGGGGCGCTTGTGTTGGAATTGCAGCCGTGTCATGGCCGATCGGTTGGGTTGCGAAGTTCATACCCGTTCCTCAGATGCCAATCTTCCGTTATCTGAAGATGAAGACATCAAAGTGA | 3072 | 43.75 | MTADILHEQFDRIRYLLDASKTNSKPNKRWQFAFLTIYCSRALSNSLWQNKKPPLPPSSSYTSIDISSENAFRIDKTTLSELVKDKHLKKLQDIHSGVNGIAAALKTDMNHGINGQDDQDIILRQKEFGSNTYKKPPTKNFLHFIVEAFKDLTIFILLACASLSLGFGIKEHGLKEGWYDGGSIFLAVFIVIIFSAISNYKQNRQFNKLSKLSDNIQIEVVRNGRRQNISIFDILVGDIVCLKIGDQVPADGLFLNGHSLQVDESSMTGESDHVEINHENQPFLFSGTKIADGYGQMLVTCVGMNTTWGEMMSSISRDNHEITPLQERLNKLTSSIGKVGLTVAFLVLIVLLVRYFTGNTKDDNGVREYNGKQTSSDDVINAVIGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMGDNAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWIGTESMEQGTTTTTTSTSIISSDLLETIRQGIAVNTTGSVYYKPNSSGQAEVDITGSPTEKAILSWAVTEMNMNMEEITKNCAVLHVETFNSQKKRSGVLIRKNVDNTIHVYWKGAAEMILEMCSSYYDASGNVNDLGVVEKMKIVKIIQGMAASSLRCIAFAHSQVSDFQTEQKKQIKESNLILSGLVGIKDPCRPGVKEAVEACQYAGVKIKMITGDNIFTAKAIATESGILRLNQDLNGAVIEGSEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLKWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPTKELMDSPPVGWTEPLITNIMWRNLLFQALYQVVVLLTLQFKGESIFGVSKAVNETLIFNTFVLCQVFNEFNARNLEKKNVFKGILKNKLFLGIIVFTIVLQIMMVEFLKKFAGTERLNWGQWGACVGIAAVSWPIGWVAKFIPVPQMPIFRYLKMKTSK | 1023 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1209868 | 1212939 | - | Conep07aG0029200.1 | Cone7ag0285 | 440881 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0285 | 1023 | FunFam | Calcium-transporting ATPase | 450 | 652 | - | - | |
| Cone7ag0285 | 1023 | Pfam | Cation transporting ATPase, C-terminus | 836 | 1006 | IPR006068 | - | |
| Cone7ag0285 | 1023 | SUPERFAMILY | Calcium ATPase, transduction domain A | 217 | 314 | IPR008250 | - | |
| Cone7ag0285 | 1023 | CDD | P-type_ATPase_Ca_PMCA-like | 124 | 884 | - | - | |
| Cone7ag0285 | 1023 | Pfam | Cation transport ATPase (P-type) | 505 | 585 | - | - | |
| Cone7ag0285 | 1023 | SUPERFAMILY | HAD-like | 438 | 856 | IPR036412 | - | |
| Cone7ag0285 | 1023 | PANTHER | CATION TRANSPORTING ATPASE | 63 | 1008 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone7ag0285 | 1023 | PRINTS | H+-transporting ATPase (proton pump) signature | 603 | 621 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag0285 | 1023 | PRINTS | H+-transporting ATPase (proton pump) signature | 783 | 808 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag0285 | 1023 | PRINTS | H+-transporting ATPase (proton pump) signature | 751 | 767 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag0285 | 1023 | Gene3D | - | 450 | 652 | IPR023299 | GO:0000166(InterPro) | |
| Cone7ag0285 | 1023 | FunFam | Calcium-transporting ATPase | 641 | 796 | - | - | |
| Cone7ag0285 | 1023 | Pfam | Cation transporter/ATPase, N-terminus | 96 | 164 | IPR004014 | - | |
| Cone7ag0285 | 1023 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 95 | 1008 | IPR023298 | - | |
| Cone7ag0285 | 1023 | FunFam | Calcium-transporting ATPase | 768 | 1010 | - | - | |
| Cone7ag0285 | 1023 | Gene3D | - | 115 | 316 | - | - | |
| Cone7ag0285 | 1023 | FunFam | Calcium-transporting ATPase | 194 | 316 | - | - | |
| Cone7ag0285 | 1023 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 67 | 1008 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 263 | 277 | - | - | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 751 | 770 | - | - | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 775 | 787 | - | - | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 440 | 454 | - | - | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 645 | 656 | - | - | |
| Cone7ag0285 | 1023 | PRINTS | P-type cation-transporting ATPase superfamily signature | 667 | 677 | - | - | |
| Cone7ag0285 | 1023 | SMART | Cation_ATPase_N_a_2 | 93 | 169 | IPR004014 | - | |
| Cone7ag0285 | 1023 | Pfam | E1-E2 ATPase | 218 | 418 | - | - | |
| Cone7ag0285 | 1023 | Gene3D | - | 437 | 796 | IPR023214 | - | |
| Cone7ag0285 | 1023 | SFLD | Haloacid Dehalogenase | 422 | 804 | - | - | |
| Cone7ag0285 | 1023 | Pfam | haloacid dehalogenase-like hydrolase | 621 | 765 | - | - | |
| Cone7ag0285 | 1023 | Gene3D | - | 147 | 1005 | - | - | |
| Cone7ag0285 | 1023 | SFLD | p-type atpase | 422 | 804 | IPR044492 | - | |
| Cone7ag0285 | 1023 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 446 | 657 | IPR023299 | GO:0000166(InterPro) | |
| Cone7ag0285 | 1023 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 442 | 448 | IPR018303 | - | |
| Cone7ag0285 | 1023 | NCBIfam | HAD-IC family P-type ATPase | 184 | 357 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag0285 | 1023 | NCBIfam | HAD-IC family P-type ATPase | 724 | 832 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag0285 | 1023 | NCBIfam | HAD-IC family P-type ATPase | 384 | 465 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0579 | Cone-Chr17:3019882 | Cone7ag0285 | Cone-Chr7:1209868 | 0 | dispersed | |
| Cone2ag0665 | Cone-Chr2:31727612 | Cone7ag0285 | Cone-Chr7:1209868 | 0 | dispersed | |
| Cone7ag0285 | Cone-Chr7:1209868 | Cone9ag1384 | Cone-Chr9:10346429 | 3.85E-257 | dispersed | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone7ag0285 | Cone-Chr7:1209868 | 0 | wgd | |
| Cone20ag0829 | Cone-Chr20:5887976 | Cone7ag0285 | Cone-Chr7:1209868 | 2.79E-218 | wgd | |
| Cone3ag0703 | Cone-Chr3:3598745 | Cone7ag0285 | Cone-Chr7:1209868 | 2.46E-111 | wgd | |
| Cone4ag0278 | Cone-Chr4:1262302 | Cone7ag0285 | Cone-Chr7:1209868 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0285 | K01537 | - | vvi:100264868 | 1439.48 |