Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0295 ATGGATTCTCGAAACAACGTCGAAGCTGCCGAAGAAGATGAATCTCCATTTGAGTTCCGGGCACTAGAGGTAGCTTTTGAAGCCATTTGTAGTTTTCTTGCTGCTCGGACAACAGAACTTAGACCACGGCATATCCTGCCTTGGATGAGCTTACCTCCATGGTATACTTCCAAATGGAGATTCCTTAATTGGAATGTGAGTAGCCGTAACTTGGAAAGTGTTCGAAAGCTGAAGAGTGCAATGAACAGAATGAATGCTCGCGTTCAAAAGGTAAGAGATGATGAACTCAAACAGTTACGGGAAGATGATGATGATATGGCGGAGCTTTACTTCTTGAGAAAGGTCTCTGTAGCATCTCCTCCGCTGAGCGGTTTTGGTGCCGGAAATGTTCTTTTTCACTCACCTGTAACTTCAAAGATTTCAAGAGCTAGTAGAGCAAGCATGTTTTCTTTTCATGGAGATGAAAATGATGTTGAGGACCCTGAAATGTTACTGGAGCTCATCTTCCAGCTCTTATTTCACTATTAG 528 42.99 MDSRNNVEAAEEDESPFEFRALEVAFEAICSFLAARTTELRPRHILPWMSLPPWYTSKWRFLNWNVSSRNLESVRKLKSAMNRMNARVQKVRDDELKQLREDDDDMAELYFLRKVSVASPPLSGFGAGNVLFHSPVTSKISRASRASMFSFHGDENDVEDPEMLLELIFQLLFHY 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1272309 1273078 + Conep07aG0030200.1 Cone7ag0295 440891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0295 175 Coils Coil 74 94 - -
Cone7ag0295 175 Gene3D Magnesium transport protein CorA, transmembrane region 1 174 - -
Cone7ag0295 175 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 172 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0295 Cone-Chr7:1272309 Cone7ag1020 Cone-Chr7:7874808 6.64E-30 dispersed
Cone14ag0131 Cone-Chr14:606039 Cone7ag0295 Cone-Chr7:1272309 2.13E-43 wgd
Cone15ag0138 Cone-Chr15:647124 Cone7ag0295 Cone-Chr7:1272309 6.16E-44 wgd
Cone4ag0291 Cone-Chr4:1342874 Cone7ag0295 Cone-Chr7:1272309 3.35E-43 wgd
Cone4ag1110 Cone-Chr4:9607687 Cone7ag0295 Cone-Chr7:1272309 7.94E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0295 K16075 - gmx:100810239 168.703