Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0315 ATGAAGATAATGTTCCCCGTGAAACGAGTTGTGGATTACGCCGTCAAAATATGGGTCAAACCCGACAAGAGCGGGGTGGAGACCCATAACGTGAAGATGTCGATGAATCCCTTCTACGAGATCGCGCTGGAGGAGGCTCTTCGAATAAGAGAATCGAGCTTGGCCTCAGAGGTTGTGGTGGTAAGTATGGGGCCCACACAGTGTGTAGATACTCTAAGGACGGGCCGGGCAATGGGCGCAGATCGGGGCATTCACGTCGATGTTTCTGGAAATCTTCATCCCCTCTCTGTTGCTAAGTTTCTGAAGGCTCTTTTCGAGAGTGAGAAACCTGGCCTTCTTATCCTTGGAAAACAGATGATTGCAGGCCATCTCAACTGGCCTCAAGGGACCTTTGCTTCTAAGGTTGTACTGGATAAGAAGAAAAAGGCAGTGACAGTAGCTAGGGAGGTCGATGAAGTAAGGGATCTGAGGCTGAATCAACCGAGGTATGCTACACTGCCCAACATAATGAAAGCAAAATCAAAGCCGATAAAGAAATTCACTCCGAACAAGTTGAATGTTGACATAAGATCCGATTTAGAGGTTGTTCAAGTCACTGAAAGAGGTTCATAG 612 47.39 MKIMFPVKRVVDYAVKIWVKPDKSGVETHNVKMSMNPFYEIALEEALRIRESSLASEVVVVSMGPTQCVDTLRTGRAMGADRGIHVDVSGNLHPLSVAKFLKALFESEKPGLLILGKQMIAGHLNWPQGTFASKVVLDKKKKAVTVAREVDEVRDLRLNQPRYATLPNIMKAKSKPIKKFTPNKLNVDIRSDLEVVQVTERGS 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1369109 1370387 - Conep07aG0032300.1 Cone7ag0315 440911

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0315 203 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT 1 200 IPR012255 GO:0005739(PANTHER)|GO:0009055(PANTHER)|GO:0009055(InterPro)|GO:0009063(PANTHER)|GO:0033539(PANTHER)
Cone7ag0315 203 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 200 - -
Cone7ag0315 203 Pfam Electron transfer flavoprotein domain 26 181 IPR014730 -
Cone7ag0315 203 CDD ETF_beta 2 181 IPR033948 -
Cone7ag0315 203 Gene3D HUPs 1 203 IPR014729 -
Cone7ag0315 203 SMART ETF_2 23 189 IPR014730 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0315 K03521 - - csv:101210570 295.049
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0320 Cone-Chr4:1450406 Cone7ag0315 Cone-Chr7:1369109 2.59E-111 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g673 . . . . . Bpe14g01245 . . . . . Cma14g01807 . Car14g01623 . . . . . . . . . . . . . . . . . . . Cone7ag0315 Cone4ag0320 Lsi05g01720 . . Cme06g00504 Blo02g00735 . . Bda13g00071 . . Bma02g00792 . . . Cmo14g01843 . . . . . . . . . . . . . . . . . . . . . Csa03g01220 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002713 3 0 2 2 2 1 2 1 1 1 1 1 3 2 2 3 1 4 2 1 2 2 2 2 2 2 1 2 2 3 55