Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0321 ATGGCAAGAGAGCAGTTACACGTGCTTAATGCACTAGACGTTGCGAAAACGCAATGGTACCATTTCACAGCAATTGTGATTGCCGGGATGGGGTTCTTCACAGATGCTTACGATCTGTTTTGCATCTCTCTTGTGACAAAGCTGCTAGGACGTATTTACTACTACGAAGAAGGCTCTAGCAAACCTGGCGTGTTGCCTTCAAATGTATCATCTGCTGTCACTGGAGTTGCTTTCTGTGGGACCCTCGCAGGGCAACTGTTTTTCGGTTGGCTCGGCGACAAAATGGGCAGGAAACGGGTCTACGGAATGACCCTTATGATGATGGTTCTTTGCTCAATTGCTTCTGGTCTCTCCTTTAGCAAAGACCCTACGGCTGTTATTACTACTCTATGTTTTTTCCGGTTTTGGCTCGGCTTTGGCATTGGTGGTGATTATCCACTTTCAGCAACTATCATGTCTGAATATGCCAACAAGAAGACTCGAGGTGCTTTCATTGCTGCAGTCTTTGCTATGCAAGGGTTCGGGATTTTAGCCGGCGGCATGGTTGCAATTGTAGTCTCAGCAGCTTTCAAGGCTAAATACATTGTCCTTCCGTATGAACTCGATCCAGTGGGCTCCACTGTGCCCCAAGCTGATTATGTTTGGCGGATAATCGTTATGTTCGGTGCATTGCCAGCTCTTCTGACTTATTACTGGCGTATGAAGATGCCTGAAACTGCTCGGTACACGGCTTTGGTAGCCAAGAATGCTAAACAAGCTGCAGCCGATATGTCACGAGTAATGCAGGTTGATTTAGAAGCAGAACAGGAAAAGATAGATCAGGCCGGAGACAAATCCAACGATTTCGGGTTGTTCACAAAGCAGTTTCTTCGCCGCCATGGGCTTCACTTGCTTGGAACCACCACTACTTGGTTCCTATTGGACATAGCTTTTTACAGTCAAAATCTATTTCAGAAGGACATCTTCACTGCTATAGGCTGGCTTCCAGATGCTAAAACCATGAATGCTCTTGAAGAAGTGTACAAAATTGCAAGGGCTCAAACTCTCATAGCTCTTTGCAGCACCGTGCCGGGTTATTGGTTTACAGTTGCCTTGATTGATAAAATAGGAAGATTTGCAATTCAATTAATGGGCTTCTTCTTCATGACCGTTTTCATGTTTGCCTTGGCCATTCCTTACCACCACTGGACTCTAAAAGCAAACCGAATTGGGTTCGTCATAATGTACTCTCTGACATTCTTCTTTGCCAATTTCGGTCCAAACGCCACGACATTTGTTGTACCGGCTGAAATTTTCCCAGCAAGGCTAAGATCGACCTGCCACGGTATATCAGCTGCTGCTGGAAAGGCAGGTGCAATTGTTGGAGCATTTGGATTTCAATATGCCGAAAAGGGGATTGGAGTTAAAAAGACACTTATTGTTCTCGGTGTGATCAATGCTCTTGGTGTGATGTTCACTTTCTTGGTCCCCGAATCAAAGGGAAAATCGCTGGAGGAAATGTCTGGAGAAGCCGAGGAAGAAATGGAAGAAACTTCGGATTCAAAAGCGCAGCAGGCCAGTGGTTACGACACTAGAACTGTTCCCGTGTGA 1590 45.79 MAREQLHVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEEGSSKPGVLPSNVSSAVTGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVLCSIASGLSFSKDPTAVITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIVVSAAFKAKYIVLPYELDPVGSTVPQADYVWRIIVMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSRVMQVDLEAEQEKIDQAGDKSNDFGLFTKQFLRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPDAKTMNALEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKANRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFQYAEKGIGVKKTLIVLGVINALGVMFTFLVPESKGKSLEEMSGEAEEEMEETSDSKAQQASGYDTRTVPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1397719 1400908 + Conep07aG0032900.1 Cone7ag0321 440917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0321 529 CDD MFS_PhT 25 493 - -
Cone7ag0321 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
Cone7ag0321 529 SUPERFAMILY MFS general substrate transporter 11 501 IPR036259 -
Cone7ag0321 529 MobiDBLite consensus disorder prediction 514 529 - -
Cone7ag0321 529 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone7ag0321 529 Gene3D MFS general substrate transporter like domains 20 518 IPR036259 -
Cone7ag0321 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
Cone7ag0321 529 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Cone7ag0321 529 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone7ag0321 529 MobiDBLite consensus disorder prediction 497 529 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0612 Cone-Chr17:3378888 Cone7ag0321 Cone-Chr7:1397719 1.77E-305 dispersed
Cone1ag0956 Cone-Chr1:54796643 Cone7ag0321 Cone-Chr7:1397719 8.26E-236 dispersed
Cone4ag0327 Cone-Chr4:1490387 Cone7ag0321 Cone-Chr7:1397719 0 dispersed
Cone5ag0654 Cone-Chr5:2795789 Cone7ag0321 Cone-Chr7:1397719 4.85E-37 dispersed
Cone5ag0655 Cone-Chr5:2796411 Cone7ag0321 Cone-Chr7:1397719 4.53E-11 dispersed
Cone7ag0321 Cone-Chr7:1397719 Cone3ag1149 Cone-Chr3:30119793 1.69E-06 dispersed
Cone14ag0148 Cone-Chr14:726930 Cone7ag0321 Cone-Chr7:1397719 3.07E-298 wgd
Cone15ag0159 Cone-Chr15:769569 Cone7ag0321 Cone-Chr7:1397719 1.94E-101 wgd
Cone20ag0800 Cone-Chr20:5678006 Cone7ag0321 Cone-Chr7:1397719 1.24E-159 wgd
Cone4ag0326 Cone-Chr4:1480205 Cone7ag0321 Cone-Chr7:1397719 1.31E-292 wgd
Cone4ag1129 Cone-Chr4:9741679 Cone7ag0321 Cone-Chr7:1397719 2.07E-304 wgd
Cone7ag0321 Cone-Chr7:1397719 Cone7ag0999 Cone-Chr7:7720701 8.07E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0321 K08176 - csv:101209582 870.537