Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0324 ATGGCATCCTCGGCCACATTCTCTGCGGTCGCTGCTTCTCTTTCAAGTACTAGCTCACCTGTGCTCCCTCGCCGCTCCTCTACGCGCCATTTCGCACCGTCGACTTACGGAACCAGAATTCTCCGGCAGAGTACCGTTTGTGCGGTATCCAGTCAGAAAATTGCGTTGCAGAGACGGAAGCTCGGTGATTCCGACCTTGAAATCAGCGAGATTACTCTCGGAACGATGACTTTCGGGCAGCAAAACACAGAGAAAGAAGCTCATGAACTGCTCAGTTATGCTTTTGAAAATGGCATCAATATTCTTGATACTGCCGAGGCTTATCCGGTCCCCCTAAAAAAGGAGACCCAAGGAAGAACCGACATCTATGTTGGTAATTGGCTCAAGTCCCAACCTCGTGATAAGGTGATTGTGGCAACAAAAGTTAGTGGTTATTCGGAGAGAACAACATATTTGCGTGACAGCGGAAAGGTTTTGCGAGTGGATCGTGACAATATCAGAGAAAGTGTAGAGAAAAGCCTCAAACGACTCAATACTGATTACATTGACTTGCTGCAAATTCACTGGCCAGATCGTTATGCACCACTGTTTGGTGAGTTTTCTTATAATTATTCAAAATGGAGGCCAAGTGTGCCATTTGTGGAGCAACTGGAGGCCTTTCAGGAACTCATTGAGGAAGGAAAGGTACGCTATATTGGTGTTTCCAATGAAACTTCCTACGGAGTAATGGAGTTTGTTCATGCAGCAAAAACCAAAGGATTACCAAAGATCATTAGCATCCAAAACAATTACAGTCTGTTATTCAGATGTCGTTTCGAAGTTGATCTTGCTGAAGTTTGCCATCTGAATAATTACAATATCGGCTTACTTTCTTACTCCCCTCTAGCTGGTGGAGCATTGAGTGGAAAATACTTAGATAGCAATTCTGAGGCTGCCAAAACTGGAAGATTTAACCTATTCCCTGGCTACATGGAAAGATATAACAAATCCATTGCCAAGGAAGCGACTATAAAATATGTGGAGTTGGCCAAGAAGCACGGCTTAAGTCCAGTTCAGCTTGCCCTTGGATTTGCTAGAGACAGGCCATTTATGACAAGTTCGATTATAGGTGCAACCTCCATGGAGCAATTGAAGGAAGACATTGATGCTTTTGTGACAACAGTGAGGCCTTTGCCCGAAGAAGTATTAACAGACATTGAAGATCTATTCAAGAGATACAGAGATCCAGCTGTCCTCTAG 1239 44.23 MASSATFSAVAASLSSTSSPVLPRRSSTRHFAPSTYGTRILRQSTVCAVSSQKIALQRRKLGDSDLEISEITLGTMTFGQQNTEKEAHELLSYAFENGINILDTAEAYPVPLKKETQGRTDIYVGNWLKSQPRDKVIVATKVSGYSERTTYLRDSGKVLRVDRDNIRESVEKSLKRLNTDYIDLLQIHWPDRYAPLFGEFSYNYSKWRPSVPFVEQLEAFQELIEEGKVRYIGVSNETSYGVMEFVHAAKTKGLPKIISIQNNYSLLFRCRFEVDLAEVCHLNNYNIGLLSYSPLAGGALSGKYLDSNSEAAKTGRFNLFPGYMERYNKSIAKEATIKYVELAKKHGLSPVQLALGFARDRPFMTSSIIGATSMEQLKEDIDAFVTTVRPLPEEVLTDIEDLFKRYRDPAVL 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1414639 1417954 + Conep07aG0033200.1 Cone7ag0324 440920

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0324 412 PANTHER NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED 52 405 IPR050523 -
Cone7ag0324 412 CDD AKR_Tas-like 68 402 - -
Cone7ag0324 412 SUPERFAMILY NAD(P)-linked oxidoreductase 56 408 IPR036812 -
Cone7ag0324 412 Gene3D - 56 411 IPR036812 -
Cone7ag0324 412 PRINTS Aldo-keto reductase signature 172 190 IPR020471 GO:0016491(InterPro)
Cone7ag0324 412 PRINTS Aldo-keto reductase signature 220 237 IPR020471 GO:0016491(InterPro)
Cone7ag0324 412 Pfam Aldo/keto reductase family 70 401 IPR023210 -
Cone7ag0324 412 FunFam NADP(H)-dependent aldo-keto reductase 56 411 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0324 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0878 Cone-Chr11:7261212 Cone7ag0324 Cone-Chr7:1414639 4.13E-33 dispersed
Cone15ag0579 Cone-Chr15:2938185 Cone7ag0324 Cone-Chr7:1414639 2.73E-22 dispersed
Cone4ag0385 Cone-Chr4:1748186 Cone7ag0324 Cone-Chr7:1414639 2.78E-27 dispersed
Cone6ag0258 Cone-Chr6:1183171 Cone7ag0324 Cone-Chr7:1414639 4.15E-22 dispersed
Cone7ag0324 Cone-Chr7:1414639 Cone18ag0680 Cone-Chr18:3618386 7.47E-93 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g715 . . . . . Bpe14g01257 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag0324 . . . . . . . . Bda13g00060 . . Bma02g00780 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011274 1 1 0 1 1 2 1 2 1 0 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0 1 2 2 31