Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0345 ATGGCAGACGAGGTAGCGATAGAGGCAGTTGCGGCGGCGGCGACGGCGACGGAGGCGGTGGAGACAGGGGAAACCAAGCCGGAATCACACAAGCTGGAGAGAAAGTGGACGTTTTGGTTCGACAATCAGTCTAAGCCGAAGCAAGGTGCTGCTTGGGGCTCCTCTCTTCGCAAGGTCTACACCTTCGATACCGTCGAGGAATTTTGGGGTTTGTATGAACAGGTATTCAAGCCGAGCAAGTTGCCTGGAAACGCTGATTTCCACTTGTTCAGAGCTGGAGTTGAACCCAAGTGGGAAGATCCCGAGTGTGCGAATGGAGGAAAGTGGACTGTTACCAGCAGCAGAAAGTCACACCTTGACACCATGTGGCTCGAAACTATGATGGCTTTGATTGGTGAGCAATTTGATGAGACCGATGAGATCTGTGGTGTGGTTGCAAGTGTGAGACAAAGGCAGGACAAGGTTGCTTTATGGACCAAGGCAGCAGCAAATGAAGCTGTTCAGATGGGGATTGGGAGGAAGTGGAAGGAGATAATTGATGTCACTGACAAGATAACTTACAGCTTCCATGATGATTCTAAAAGGGAGAGATCAGCTAGAGGTCGCTACAACTTGTGA 618 50.49 MADEVAIEAVAAAATATEAVETGETKPESHKLERKWTFWFDNQSKPKQGAAWGSSLRKVYTFDTVEEFWGLYEQVFKPSKLPGNADFHLFRAGVEPKWEDPECANGGKWTVTSSRKSHLDTMWLETMMALIGEQFDETDEICGVVASVRQRQDKVALWTKAAANEAVQMGIGRKWKEIIDVTDKITYSFHDDSKRERSARGRYNL 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1505292 1506962 - Conep07aG0035300.1 Cone7ag0345 440941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0345 205 Pfam Eukaryotic initiation factor 4E 31 186 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cone7ag0345 205 SUPERFAMILY eIF4e-like 21 199 IPR023398 -
Cone7ag0345 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 21 204 IPR023398 -
Cone7ag0345 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 19 197 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cone7ag0345 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 86 109 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cone7ag0345 205 FunFam Eukaryotic translation initiation factor 4E 21 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0928 Cone-Chr6:4749111 Cone7ag0345 Cone-Chr7:1505292 1.96E-70 dispersed
Cone7ag0345 Cone-Chr7:1505292 Cone9ag0931 Cone-Chr9:4570020 8.29E-67 dispersed
Cone14ag0175 Cone-Chr14:814931 Cone7ag0345 Cone-Chr7:1505292 2.20E-126 wgd
Cone15ag0183 Cone-Chr15:874156 Cone7ag0345 Cone-Chr7:1505292 1.72E-119 wgd
Cone4ag0359 Cone-Chr4:1630709 Cone7ag0345 Cone-Chr7:1505292 3.83E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0345 K03259 - csv:101208495 335.88