Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0386 ATGGCCGCCGATGGGAAAGTCTACACCTTGGCAGAAGTAGCCGAGCACAAGACGGCTGATGATTGTTGGCTAATCATTGACGGCAAGGTTTACGATGTGACTAAATTCTTAGAAGACCATCCAGGGGGCGACGAGGTTTTGGTGTCAGCTACAGGGAAGGATGCAACTGATGATTTTGAAGATGTGGGTCACAGTACAAGCGCAAAAGAAATGATGAAAGAATTCTATGTGGGGGAGATCAATTCCTCCACGGTCCCGAAAAAGGTGGCATATACCCCTCCGAACCAACCTCATTACAATCAGGACAAGACATCTGAGTTCATCATCAAAATCCTCCAGTTCCTAGTTCCACTCGCCATCTTGGGTTTGGCTGTCGGAATCCGTATCTACACCAAATCGTGA 402 47.51 MAADGKVYTLAEVAEHKTADDCWLIIDGKVYDVTKFLEDHPGGDEVLVSATGKDATDDFEDVGHSTSAKEMMKEFYVGEINSSTVPKKVAYTPPNQPHYNQDKTSEFIIKILQFLVPLAILGLAVGIRIYTKS 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1704037 1705645 - Conep07aG0039500.1 Cone7ag0386 440982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0386 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone7ag0386 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cone7ag0386 133 PANTHER CYTOCHROME B5 5 125 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone7ag0386 133 FunFam Cytochrome b5 type B 2 85 - -
Cone7ag0386 133 SMART Cyt_b5_2 8 81 IPR001199 -
Cone7ag0386 133 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cone7ag0386 133 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cone7ag0386 133 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cone7ag0386 133 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cone7ag0386 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cone7ag0386 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cone7ag0386 133 Gene3D - 1 86 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0782 Cone-Chr11:6032601 Cone7ag0386 Cone-Chr7:1704037 1.63E-38 dispersed
Cone13ag0897 Cone-Chr13:7942550 Cone7ag0386 Cone-Chr7:1704037 1.08E-21 dispersed
Cone20ag0272 Cone-Chr20:1209198 Cone7ag0386 Cone-Chr7:1704037 4.21E-13 dispersed
Cone4ag0958 Cone-Chr4:8200659 Cone7ag0386 Cone-Chr7:1704037 6.11E-19 dispersed
Cone5ag0716 Cone-Chr5:3082824 Cone7ag0386 Cone-Chr7:1704037 4.71E-45 dispersed
Cone7ag0386 Cone-Chr7:1704037 Cone9ag0531 Cone-Chr9:2544585 7.71E-34 dispersed
Cone4ag0397 Cone-Chr4:1806930 Cone7ag0386 Cone-Chr7:1704037 4.46E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0386 K23490 - rcu:8265636 229.95