Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0441 ATGCGTACGAGGAAGAAGACGACTGGTTCTTCAACTTCGAAGAAATCGAACCCTAATGAGAACTACCAGCCTTCCAAGTTCGGAATCCAACATTTCTTCGAGCGCCACTCCCAAAATGTCCTTTCTCAGAAACCCGTCGCCGTTTCATCCCCTCCCGGTCCAGGCTCCGATAACCATCGGAGCAATCTCAAAACAGCATCGGTTGGTCCCAAAGAAGTGGATCCCGCTGCGCAGAAGATAGTAGTGAAGGTGACCGATGCAAATGAATCTGCCGTTTCAGCTTCCAAAAGGGTTAATGAGCTGTCGAAGGGGAGTGATGCGAACAATCAGTCACAGAATACGCCGCCTGAGAATCTGGTAATTGTTGGTATAGGTGCTGAAGAGGGTATGCCTGAGGTCTCGCCGGAGGTATCTAAGTCTGTTTCTCGGAAGCGCTTCAAGTTCTCGCCTGGGATGCTGATTAAGCAGAGTCAGGATGATGGAGGCGAAGAGATCACGTGGAAGATATCTCCTGTGGACCAAAGACTTCGGGCCGTGTCAAAGCTGATGCCAGAGACAATAAGAGTGTTAGCAGATTCTTCAAGGCTCAATTCTCTGAGGATGAAACGATGCCAACAAAATAAGACCTCTCCACTTAAGGATGGTAAGGTTGAGAAGTGGAATTCCTCTCCAAGAATGAAGACTTCTGAACGACCTTTTGTATCTGTCGATAGGGTTGGAGTCAAAATGGACAATCCTGACTACAACATGGAATGCAATGAAATTGCAACAGATTCTATGACTGGATTGGGAATAGCTACTAGCCCCAGTCCCTTCCGAACTCCTCCATCTCTATCGTATGGCCATGATAAGCTTGAAAATGGTGTTGCAAGCAATGGAGTGTCTGATCAGCTTAGCTCAAGGCAACATAAAAGGGCATTGCTTGAGCTTTTAGATCAAGTTGAAGATGTCATTTGTGTTGAAAATTCAGCATCCGTTGATTTGAAGGTGCACTCATGCAAAGTCCAAGGTAGAAATGGTGAGAAATTTCCAGTCAAAGTTGATGCTATAGTAAATGAAGTTGCACCAGATCCACCTAAAGATATTAGTCTAGCCTCAATCAATTGTGATTTCCTTGTTTTGGAGGTAACTGAGAAATGTGAATCTGCTGATTCTTCTAATGTTCAACGCTCATATAAGGTCCTTCGCTTACTGAATGAGCAAAGCGGGGAAGAGAGGATTGTGTGCTTGTGGGAGGAGTGGTTTTTCAGTGTCATTTCACCTGGTGATACTGTAAATGTTATAGGTGAATTTGATGATGAAGGAAGGTGTCATGTTGACCACGATAATAACTATGTTATCCTTCACCCTGATATTCTAGTGTCTGGCACTCGGGTTGCTGCTAGTTTCTATTGCACAAGGCGAACTGTTCTTGATGAGAGGTTAAAACGCAATGAGCATTCAACTTCAGCATTAATTGGTACATTACTGCACCAAATATTTCAGGCTGGTCTTTTGAAGGAGACACCCACTTCAAACTTCTTGGAGGAATATGCAAGAACAGTGCTGCAGAAAAATATGGAAAACGTTTACGCATGTGGAGCAAGTGAAAATGACATATACAAATGCATGAGTGAGGCCATTCCAAAAATATTGCATTGGATTTCCCTCTTCAAATCCACAATGGGTTCAGAAGCCCCTATTGTGGAGTTTTGCACTGATGGTGGGCATAAAAGGGTTAATGTATCAGAGGTGTTTATGCATCAGTTTCACATCTTTACTGGATGGATAGAAAACATCTTGTTGGTAATTGACATCGAGGAGATGGCATGGGCGCCGAGATATGGTCTGAAGGGAATGATTGATGCTTCTATCAGGGTAGATGTTGCATCAAACAAAAATGTAGCTTCTGAGAATGTCATGCCTTTAGAGTTTAAAACTGGAAAATACTCTATGGAACACAAAGCTCAAGTCATGCTCTACACATTACTCATGTCTGAGAGATACCAGAAGCATATTGATTCTGGGATGTTATATTATCTCCAATCTGATCAGACTCAGGGAATCACGGTTCAAAGATCTGATTTGGTTGGATTGATCATGCGCCGCAATGACCTTGCAAACGAAATTCTTGAAGCATCAAGAACACAGTTACTGCCCCCCATGTTACAGAGTCAAAGCATGTGCAAAGGATGTCGTCATCTTGATGTTTGTGCCATCTATCATAAGGTGCGAGGTGGGACTGTGGAGAGCAGTGGGTTGGGAGACCTGTTCGAATCCCATACTCACCAAGTAACAACTGCTCATAGTGTTTTCTTGCGGCACTGGGATTGGTTGATTGACTTAGAGGCTAAGGAAGCACAGGTTACGTCAAAAGATATCCTGCGTTCCCGCAGTCTGAGGAGTGATCATCTCACTAGTTGTCTCTCTCCAATCGTTCTTGATGCTTCAGATAGCCATCAGCATTGGAATTACCAGAAGGATGGCCGGTTTATTTACCGTTTTATACGTCAAGATTTGCCTTCAAATTTGAAAGAATCTGTTGAAGATTCTCCAAGTGCTTCCACAAACGATGTGTCCTGTTCACTTCGAACTGGAGATTATGTGATACTTAGCACAGAACCTGGTCGGCTAACAGTTGCGAGGGGGGTCATTAAAGTTATCAGCCGCTTCTATGTTTCTGTTTCTTTTTCAAAGCGTTTACGCCTTCCTAGAAGCAAACCTTCTTCAGAAGCACATGATATCCTAAAGGAGGTCTGGCGGGTTGACAAAGATGAATTTATTACTTCTTTTGCAGTTATGAGGTTTAACCTCATTCAACTTTTTCTCCAAGGTGTGCAAAGTGATCATCTTAGGAAGATGATTGTCGACCTTGAGGCTCCTAGATTTGACAGTGGATGTATATTCAGCCAGGATCCAGCAGTATCATATGTCTGGTCCCAGAAGAATCTAAATGATGACCAGCGCCGAGCCATCCTTAAGATACTTGCAGTAAAGGATTATGCTCTAATTCTAGGAATGCCCGGAACAGGCAAGACATCTACAGTGGTGCATGCTGTGAAGGCTTTGTTGATTAGAGGGGCATCAATTTTGCTCACATCCTACACAAACACTGCTGTTGATAATTTACTAATCAAACTTAAAGCTCAGAACATTGATTTTCTACGTATTGGAAGAAGTGAAGCTGTGCATGAGGAAGTTCGGGGCCATTGCTTCTCAGAGCTAAACACGCAAAGTGTCAATAACATCAGAACAAGATTAGATCAAGTCAAGGTTGTTGCAGTTACTTGTTTGGGAATAACTAGTCCATTACTGGTCAACAAAAGATTCGATATATGCATCATGGATGAAGCAGGGCAGACAACCCTTCCAGTATCCTTGGGGCCCTTAATGCTTGCTTCAACATTCGTTCTAGTTGGCGATCATTACCAACTACCTCCTCTAGTTCAAAGTGCAGAGGCTCGAGAAAATGGAATGGGGGTGAGCCTATTTTGCAGGCTTTCAGAATCACATCCACAGGCAATTTCCGCATTGCAAAGCCAGTATCGCATGTGTCAAGGCATCATGGAACTATCCAATACCTTGATATATGGAGACCGATTATGCTGTGGCTCAGAAGAAATTGCAGACGCTAAGCTCAAGTTTTCAAGTTTGAATTCTTGTCCAATTTGGGTTAAGGATGTTATAAACCCATGCAAACCAGTCATATTTATCAACACAGATGCAGTGCCTGCGTATGAGGCAAAGGATCAGAAGAATGTGAATAACCCAATTGAAGCTTTTATAATATCAGAGGTGACTCAAGGATTAATTAACAATGGAATTGAAGGGAATGATATTGGCATCATTACTCCCTATAACTCCCAGGCAAATCTCATCAGACAATCTATCAACACGCTCTCTGTCGAGATACATACAATTGACAAATACCAGGGAAGAGACAAGGAGTGCATATTGGTATCCTTTGTCCGATCTAGAGAAAATCCTACAAACTACTCTTCTTCATTGCTCGGAGACTGGCATCGAATCAATGTAGCAATCACACGTGCCAAGAAAAAGTTGATCATGGTGGGGTCCTGCAAAAGCTTATCAAAGGTTCCGTTGTTGAAGCTTCTTCTCAACAAAGTTGAGGAGCAATCAGGCATTGTGAACATATCAAAGAAGGATATCAATCTGACAAAAAGAGAACTTAATAGATGCTCATCCTTCCATAGTAGATGA 4200 42.79 MRTRKKTTGSSTSKKSNPNENYQPSKFGIQHFFERHSQNVLSQKPVAVSSPPGPGSDNHRSNLKTASVGPKEVDPAAQKIVVKVTDANESAVSASKRVNELSKGSDANNQSQNTPPENLVIVGIGAEEGMPEVSPEVSKSVSRKRFKFSPGMLIKQSQDDGGEEITWKISPVDQRLRAVSKLMPETIRVLADSSRLNSLRMKRCQQNKTSPLKDGKVEKWNSSPRMKTSERPFVSVDRVGVKMDNPDYNMECNEIATDSMTGLGIATSPSPFRTPPSLSYGHDKLENGVASNGVSDQLSSRQHKRALLELLDQVEDVICVENSASVDLKVHSCKVQGRNGEKFPVKVDAIVNEVAPDPPKDISLASINCDFLVLEVTEKCESADSSNVQRSYKVLRLLNEQSGEERIVCLWEEWFFSVISPGDTVNVIGEFDDEGRCHVDHDNNYVILHPDILVSGTRVAASFYCTRRTVLDERLKRNEHSTSALIGTLLHQIFQAGLLKETPTSNFLEEYARTVLQKNMENVYACGASENDIYKCMSEAIPKILHWISLFKSTMGSEAPIVEFCTDGGHKRVNVSEVFMHQFHIFTGWIENILLVIDIEEMAWAPRYGLKGMIDASIRVDVASNKNVASENVMPLEFKTGKYSMEHKAQVMLYTLLMSERYQKHIDSGMLYYLQSDQTQGITVQRSDLVGLIMRRNDLANEILEASRTQLLPPMLQSQSMCKGCRHLDVCAIYHKVRGGTVESSGLGDLFESHTHQVTTAHSVFLRHWDWLIDLEAKEAQVTSKDILRSRSLRSDHLTSCLSPIVLDASDSHQHWNYQKDGRFIYRFIRQDLPSNLKESVEDSPSASTNDVSCSLRTGDYVILSTEPGRLTVARGVIKVISRFYVSVSFSKRLRLPRSKPSSEAHDILKEVWRVDKDEFITSFAVMRFNLIQLFLQGVQSDHLRKMIVDLEAPRFDSGCIFSQDPAVSYVWSQKNLNDDQRRAILKILAVKDYALILGMPGTGKTSTVVHAVKALLIRGASILLTSYTNTAVDNLLIKLKAQNIDFLRIGRSEAVHEEVRGHCFSELNTQSVNNIRTRLDQVKVVAVTCLGITSPLLVNKRFDICIMDEAGQTTLPVSLGPLMLASTFVLVGDHYQLPPLVQSAEARENGMGVSLFCRLSESHPQAISALQSQYRMCQGIMELSNTLIYGDRLCCGSEEIADAKLKFSSLNSCPIWVKDVINPCKPVIFINTDAVPAYEAKDQKNVNNPIEAFIISEVTQGLINNGIEGNDIGIITPYNSQANLIRQSINTLSVEIHTIDKYQGRDKECILVSFVRSRENPTNYSSSLLGDWHRINVAITRAKKKLIMVGSCKSLSKVPLLKLLLNKVEEQSGIVNISKKDINLTKRELNRCSSFHSR 1399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1981596 1991176 + Conep07aG0045100.1 Cone7ag0441 441037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0441 1399 Gene3D - 915 1174 IPR027417 -
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 88 117 - -
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 208 229 - -
Cone7ag0441 1399 CDD SF1_C_Upf1 1177 1370 IPR047187 -
Cone7ag0441 1399 Pfam DNA replication factor Dna2 400 620 IPR014808 -
Cone7ag0441 1399 CDD DNA2_N-like 455 701 - -
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 10 26 - -
Cone7ag0441 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1360 IPR027417 -
Cone7ag0441 1399 FunFam DNA replication helicase Dna2 573 732 - -
Cone7ag0441 1399 Gene3D - 574 732 IPR011604 -
Cone7ag0441 1399 Pfam AAA domain 976 1074 IPR041677 GO:0004386(InterPro)
Cone7ag0441 1399 Pfam AAA domain 1153 1353 IPR041679 -
Cone7ag0441 1399 FunFam DNA replication helicase 1175 1388 - -
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 1 74 - -
Cone7ag0441 1399 Gene3D - 1175 1390 IPR027417 -
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 87 117 - -
Cone7ag0441 1399 FunFam DNA replication helicase Dna2 911 1174 - -
Cone7ag0441 1399 PANTHER DNA2/NAM7 HELICASE FAMILY 227 1371 IPR045055 GO:0005737(PANTHER)|GO:0017108(PANTHER)|GO:0071932(PANTHER)
Cone7ag0441 1399 CDD DEXXQc_DNA2 976 1176 IPR026851 GO:0017116(InterPro)
Cone7ag0441 1399 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0441 Cone-Chr7:1981596 Cone8ag0446 Cone-Chr8:2827246 1.08E-31 dispersed
Cone7ag0441 Cone-Chr7:1981596 Cone15ag0915 Cone-Chr15:7185652 3.88E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0441 K10742 - mdm:103438958 1702.57