Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0452 ATGGCTGGCTTAGACCTAGGCTCAGCTTCTCGCTTTGTTCATCAACTCCAAACCCGCCCTGATCTCCACCTCCAACGACCATCCGATCACTCCGATGATGGAACCGATCACAACCACTACTCGGAAGCTGACCACGACGAAACCGCGGGCCACCACAACTCTGGCTCGGGTGACCTTGTGGCCCGTCGGCCTAGAGGCCGGCCCCCTGGCTCCAAAAACAAACCGAAACCTCCGGTCATCATAACGCGTGAAAGCGCAAACACTTTACGAGCTCATATCCTTGAGATTAGCAGCGGTTGCGACGTGTTTGAATCGGTGGCTACTTACGCCAGAAAGCGTCAACGTGGGATCTGTATCCTGAGCGGGAGTGGGACCGTCACAAATGTTAGTTTAAGACAACCGGCTGCAGCAGGCGCGGTGGTGACACTTCATGGGCGGTTCGAGATATTGTCTTTGTCGGGATCATTTTTGCCGCCCCCAGCTCCGCCCGGTGCTACAAGTTTGACTATTTTTTTGGCAGGGGGACAAGGTCAAGTTGTCGGGGGAAATGTTGTGGGTGCTTTAATTGCTTCTGGACCGGTAATTGTTATGGCATCATCGTTTACTAACGTAGCGTACGAGAGGTTACCGCTTGATGAAGAGGAGCCTACTATGCAGCAATCCGGTGGCGGAGATGGAAGTGGTGGTAATAATCAGTTCTCGGACCCGTCGAATTCGGGGTTGCCGTTCTTTAATCTGCCTTTGAACATGCCGAATCAGAATCAATTACCCATAGATGGGTGGGTTGGAAATTCAACGGGGCGGTCTTCTTATTGA 816 52.57 MAGLDLGSASRFVHQLQTRPDLHLQRPSDHSDDGTDHNHYSEADHDETAGHHNSGSGDLVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEISSGCDVFESVATYARKRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVMASSFTNVAYERLPLDEEEPTMQQSGGGDGSGGNNQFSDPSNSGLPFFNLPLNMPNQNQLPIDGWVGNSTGRSSY 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2047086 2047901 - Conep07aG0046200.1 Cone7ag0452 441048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0452 271 MobiDBLite consensus disorder prediction 214 245 - -
Cone7ag0452 271 MobiDBLite consensus disorder prediction 17 80 - -
Cone7ag0452 271 CDD DUF296 90 173 IPR005175 -
Cone7ag0452 271 ProSiteProfiles PPC domain profile profile. 86 223 IPR005175 -
Cone7ag0452 271 FunFam AT-hook motif nuclear-localized protein 89 216 - -
Cone7ag0452 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 217 - -
Cone7ag0452 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 202 IPR005175 -
Cone7ag0452 271 MobiDBLite consensus disorder prediction 220 245 - -
Cone7ag0452 271 PIRSF ESCAROLA 5 258 IPR014476 GO:0003680(InterPro)
Cone7ag0452 271 MobiDBLite consensus disorder prediction 23 52 - -
Cone7ag0452 271 Gene3D - 89 219 - -
Cone7ag0452 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 230 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0459 Cone-Chr12:2872632 Cone7ag0452 Cone-Chr7:2047086 3.25E-96 dispersed
Cone14ag0277 Cone-Chr14:1262905 Cone7ag0452 Cone-Chr7:2047086 5.58E-143 dispersed
Cone15ag0295 Cone-Chr15:1377333 Cone7ag0452 Cone-Chr7:2047086 5.36E-143 dispersed
Cone4ag1300 Cone-Chr4:10726530 Cone7ag0452 Cone-Chr7:2047086 4.20E-48 dispersed
Cone7ag0452 Cone-Chr7:2047086 Cone8ag0466 Cone-Chr8:3052220 1.08E-92 dispersed
Cone4ag0469 Cone-Chr4:2073441 Cone7ag0452 Cone-Chr7:2047086 2.45E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0452 - - - 0.0