Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0529 ATGGGTAGCTGTATTTCTTCAAGGTCTAAAGTTGAAACCTCTGTAACTGGCTGCAGTAGCACTCTCTATGTGGAAAGTCAGTCAACAAATGATACAAGCAAAGGCAAACCAGTTGCTCCAATCGCATCTTCTTCAACCACAAGCAATGCAGAAAGTTCTCTCTCAATTAACATAGAGGAGGAGCTAAAAATCTCTTCTCAGCTTAGGAAATTTTCCTTTCATGAGCTAAAGTCAGCAGCAAGAAACTTTAGACACGAGAGCCTTCTGGGGGAAGGCGGGTTTGGTTGTGTCTTTAAGGGCTGGATCAATGAGTCCGGAACTTCTCCTGTCAAACCTGGTGCTGGGCTTGCTGTTGCCATTAAGACCCTTAATCATGATGGGCTTCAAGGCCACAAAGAATGGCTTGCTGAAGTTAATTATCTTGGACACCTTCATCATCCGAACTTAGTTAAGTTAGTTGGTTATTGTATTGAGGATGATCAAAGGCTACTTGTTTATGAATTTATGCCTCGAGGAAGCTTAGAGAATCACCTTTTCAGAGGAATTCTGCCTCTTTCATGGTCCATAAGAATGAAAATTGCACTCGGTGCTGCTAAGGGTCTTGCTTTTCTTCACGAGGAAGCTGAGAGGCTTGTGATTTATCGGGATTTTAAATCGTCGAATGTCTTATTAGATGTGGACTATAATGCAAAGCTTTCTGATTTTGGACTTGCCAAAGATGGACCAGAGGGTGATAAAACTCATGTCTCCACCCGAGTTATGGGAACTTATGGCTATGCTGCCCCTGAATATGTCATGACAGGACATCTTACCTTGAAGAGTGACGTCTACAGTTTTGGGGTGGTCCTACTGGAGATGTTAATGGGCCGAAGGTCCATGGACAAGAATCGGCCGCATGGACAACAGAACTTGGTGGAGTGGGCCCGTCCCCAACTCGGCGACATGCGGATGTTCTACCGTCTGATTGACCCCCGTCTTGAAGGTCACTTCTCTATCAAGGGAGCCCAGAGAGCTTTTCAAATAGCCGCTCATTGCATTAGCCGTGACCCAAAAGCCAGACCCTTGATGAGTGAAATTGTACAAGCACTAACGCCTCTCCCAAACCTCAAAGACACGGATAGGTCTTCTTCCTTCTTCCGAGCCATGCAGGCTGAACGGGTCGGGTCTGTCCCAAATTCGAGGAGTGGTACTAGAATGCAGGAGAGTTATTTGAGAAATGGGCAGATGACGAGGAGCCCTTCTGCTACTAATGGGCTACATGCTTTGCCGTATCATAGAAGGCATCCTCACCCTTCAGCCATATTGAGTTCTGGGCGGTCATAG 1323 46.11 MGSCISSRSKVETSVTGCSSTLYVESQSTNDTSKGKPVAPIASSSTTSNAESSLSINIEEELKISSQLRKFSFHELKSAARNFRHESLLGEGGFGCVFKGWINESGTSPVKPGAGLAVAIKTLNHDGLQGHKEWLAEVNYLGHLHHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRGILPLSWSIRMKIALGAAKGLAFLHEEAERLVIYRDFKSSNVLLDVDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTLKSDVYSFGVVLLEMLMGRRSMDKNRPHGQQNLVEWARPQLGDMRMFYRLIDPRLEGHFSIKGAQRAFQIAAHCISRDPKARPLMSEIVQALTPLPNLKDTDRSSSFFRAMQAERVGSVPNSRSGTRMQESYLRNGQMTRSPSATNGLHALPYHRRHPHPSAILSSGRS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2457001 2462918 + Conep07aG0054300.1 Cone7ag0529 441125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0529 440 Gene3D Phosphorylase Kinase; domain 1 63 168 - -
Cone7ag0529 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0529 440 ProSiteProfiles Protein kinase domain profile. 83 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0529 440 ProSitePatterns Protein kinases ATP-binding region signature. 89 121 IPR017441 GO:0005524(InterPro)
Cone7ag0529 440 MobiDBLite consensus disorder prediction 26 46 - -
Cone7ag0529 440 SUPERFAMILY Protein kinase-like (PK-like) 62 363 IPR011009 -
Cone7ag0529 440 CDD STKc_IRAK 89 366 - -
Cone7ag0529 440 FunFam Serine/threonine-protein kinase BIK1 49 168 - -
Cone7ag0529 440 PANTHER OS01G0588500 PROTEIN-RELATED 50 367 IPR050823 -
Cone7ag0529 440 MobiDBLite consensus disorder prediction 405 440 - -
Cone7ag0529 440 FunFam Probable serine/threonine-protein kinase PBL8 169 384 - -
Cone7ag0529 440 Gene3D Transferase(Phosphotransferase) domain 1 169 385 - -
Cone7ag0529 440 Pfam Protein tyrosine and serine/threonine kinase 86 363 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0981 Cone-Chr13:8329200 Cone7ag0529 Cone-Chr7:2457001 5.75E-196 dispersed
Cone19ag0973 Cone-Chr19:7376643 Cone7ag0529 Cone-Chr7:2457001 3.45E-195 dispersed
Cone4ag0659 Cone-Chr4:3172065 Cone7ag0529 Cone-Chr7:2457001 5.35E-161 dispersed
Cone7ag0529 Cone-Chr7:2457001 Cone7ag0618 Cone-Chr7:3073636 8.51E-158 dispersed
Cone7ag0529 Cone-Chr7:2457001 Cone7ag0532 Cone-Chr7:2475645 2.29E-302 proximal
Cone16ag0870 Cone-Chr16:9177028 Cone7ag0529 Cone-Chr7:2457001 2.41E-219 wgd
Cone2ag0855 Cone-Chr2:34546743 Cone7ag0529 Cone-Chr7:2457001 1.68E-134 wgd
Cone2ag0176 Cone-Chr2:931601 Cone7ag0529 Cone-Chr7:2457001 1.12E-220 wgd
Cone4ag0556 Cone-Chr4:2508175 Cone7ag0529 Cone-Chr7:2457001 1.00E-272 wgd
Cone6ag0606 Cone-Chr6:2979059 Cone7ag0529 Cone-Chr7:2457001 4.15E-140 wgd
Cone7ag0529 Cone-Chr7:2457001 Cone9ag0611 Cone-Chr9:2891069 1.14E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83008 PF00656 Peptidase_C14 4.30E-63 CL0093 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0529 - - - 0.0