Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0532 ATGATTTATCCCTTGTCGAGTCGCTACCCTAGTCGGATGAACCCGACCTATTGCTCGGCGACAAGCTCAAATCGGAAACAACGATGTGCATCTTTCCTTTCCATTGTCCATCCCGTTCCTACCGTGCACAATCACATTGTTATGGAAAGTCAGTCAACAAATGATACAAGCAAAGGCAAACCAGTTGCTCCAATCGCATCTTCTTCAACCACAAGCAATGCAGAAAGTTCTCTCTCAATTAACATAGAGGAGGAGCTAAAAATCTCTTCTCAGCTTAGGAAATTTTCCTTTCATGAGCTAAAGTCAGCAGCAAGAAACTTTAGACACGAGAGCCTTCTGGGGGGAGGCGGGTTTGGTTGTGTCTTTAAGGGCTGGATCAATGAGTCCGGAACTTCTCCTGTCAAACCTGGTGCTGGGCTTGCTGTTGCCATTAAGACCCTTAATCATGATGGGCTTCAAGGCCACAAAGAATGGCTTGCTGAAGTTAATTATCTTGGACACCTTCATCATCCGAACTTAGTTAAGTTAGTTGGTTATTGTATTGAGGATGATCAAAGGCTACTTGTTTATGAATTTATGCCTCGAGGAAGCTTAGAGAATCACCTTTTCAGAGGAATTCTGCCTCTTTCATGGTCCATAAGAATGAAAATTGCACTCGGTGCTGCTAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAGAGGCTTGTGATTTATCGGGATTTTAAATCATCCAATGTCTTATTAGATGTGGACTACAATGCAAAGCTTTCTGATTTTGGACTTGCCAAAGATGGACCAGAGGGTGATAAAACTCATGTCTCCACCCGAGTTATGGGAACTTATGGCTATGCTGCCCCTGAATATGTCATGACAGGACATCTTACCTTGAAGAGTGACGTCTACAGTTTTGGGGTGGTCCTACTGGAGATGTTAATGGGCCGAAGGTCCATGGACAAGAATCGGCCGCATGGACAACAGAACTTGGTGGAGTGGGCCCGTCCCCAACTCGGCGACATGCGGATGTTCTACCGTCTGATTGACCCCCGTCTTGAAGGTCACTTCTCTATCAAGGGAGCCCAGAGAGCTTTTCAAATAGCCGCTCATTGCGTTAGCCGTGACCCAAAAGCCAGACCCTTGATGAGTGAAATTGTACAAGCACTAACGCCTCTCCCGAACCTCAAAGACACGGATAGGTCTTCTTCCTTCTTCCGAGCCATGCAGGCTGAACGGGTCGGGTCTGTCCCAAATTCGAGGAGTGGTACTAGAATGCAGGAGAGTTATTTGAGAAATGGGCAGATGACGAGGAGCCCTTCTGCTACTAATGGGCTACATGCTTTGCCGTATCATAGAAGGCATCCTCACCCTTCAGCCATATTGAGTTCTGGGCGGTCATAG 1395 46.59 MIYPLSSRYPSRMNPTYCSATSSNRKQRCASFLSIVHPVPTVHNHIVMESQSTNDTSKGKPVAPIASSSTTSNAESSLSINIEEELKISSQLRKFSFHELKSAARNFRHESLLGGGGFGCVFKGWINESGTSPVKPGAGLAVAIKTLNHDGLQGHKEWLAEVNYLGHLHHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRGILPLSWSIRMKIALGAAKGLAFLHEEAERLVIYRDFKSSNVLLDVDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTLKSDVYSFGVVLLEMLMGRRSMDKNRPHGQQNLVEWARPQLGDMRMFYRLIDPRLEGHFSIKGAQRAFQIAAHCVSRDPKARPLMSEIVQALTPLPNLKDTDRSSSFFRAMQAERVGSVPNSRSGTRMQESYLRNGQMTRSPSATNGLHALPYHRRHPHPSAILSSGRS 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2475645 2477589 + Conep07aG0054600.1 Cone7ag0532 441128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0532 464 FunFam Serine/threonine-protein kinase BIK1 73 192 - -
Cone7ag0532 464 MobiDBLite consensus disorder prediction 51 70 - -
Cone7ag0532 464 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Cone7ag0532 464 CDD STKc_IRAK 113 390 - -
Cone7ag0532 464 PANTHER OS01G0588500 PROTEIN-RELATED 72 391 IPR050823 -
Cone7ag0532 464 FunFam Probable serine/threonine-protein kinase PBL8 193 408 - -
Cone7ag0532 464 MobiDBLite consensus disorder prediction 430 464 - -
Cone7ag0532 464 Gene3D Phosphorylase Kinase; domain 1 87 192 - -
Cone7ag0532 464 Gene3D Transferase(Phosphotransferase) domain 1 193 409 - -
Cone7ag0532 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0532 464 Pfam Protein tyrosine and serine/threonine kinase 110 387 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0532 464 ProSiteProfiles Protein kinase domain profile. 107 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0532 464 ProSitePatterns Protein kinases ATP-binding region signature. 113 145 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0870 Cone-Chr16:9177028 Cone7ag0532 Cone-Chr7:2475645 3.41E-213 dispersed
Cone2ag0176 Cone-Chr2:931601 Cone7ag0532 Cone-Chr7:2475645 1.49E-212 dispersed
Cone4ag0556 Cone-Chr4:2508175 Cone7ag0532 Cone-Chr7:2475645 5.49E-269 dispersed
Cone7ag0170 Cone-Chr7:711534 Cone7ag0532 Cone-Chr7:2475645 5.60E-110 dispersed
Cone7ag0532 Cone-Chr7:2475645 Cone7ag0618 Cone-Chr7:3073636 3.30E-156 dispersed
Cone7ag0529 Cone-Chr7:2457001 Cone7ag0532 Cone-Chr7:2475645 2.29E-302 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83011 PF12600 DUF3769 1.40E-05 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0532 - - - 0.0