Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0556 ATGGCTCAAGGAAAAGCAATAGGCATAGATTTAGGCACGACCTACAGCTGCGTCGGCGTGTGGCAAAACGACCGCGTTGAGATCATCCCAAACGACCAAGGCAACCGGACAACCCCATCCTACGTGGCATTCACCGACACGGAACGATTGATCGGCGATGCAGCGAAGAACCAGGTGGCGATGAACCCTGAGAACACTGTCTTCGACGCGAAACGACTCATCGGGCGGAGATTCTCCGACCCGTCGGTTCAGAGCGATATGAAGCTCTGGCCCTTTAAGGTCATTCCTGGGCCTGGTGATAAGCCCATGATCGTCGTTCGTTATAAAGGCGAGGAAAAGCAGTTTTCGCCTGAAGAGATTTCTTCCATGGTGTTGGTTAAAATGAGGGAAATTGCAGAAGCTTTTCTCGGTCAGTCCCTCAAAAACGCCGTCGTTACGGTCCCTGCTTATTTCAATGATTCTCAGAGACAAGCCACTAAGGATGCAGGTGCTATAGCAGGGCTGAACGTCATGAGAATCATCAACGAACCAACAGCCGCCGCTATAGCGTACGGATTGGACAAAAAAGCCTCAAATAAAGGGGAACAGAACGTGCTTATATTCGATCTAGGCGGGGGCACTTTCGACGTTTCACTCCTAACAATCGAAGAAGGAATCTTCGAAGTCAAAGCCACGGCGGGAGACACCCATTTGGGCGGAGAAGACTTTGACAATCGCATGGTCAACCATTTCGCGGAAGAGTTCAAACGGAAACACAAGAAAGATATAAGCGGGAACGCTCGAGCCTTGCGGCGGTTGAGAACGGCTTGTGAAAGAGCAAAGCGAACCCTCTCTTCAACCTCACAAACCACAATCGAAATCGATTCCTTGTACGAAGGAATCGATTTCTACGCTACAATCACTAGGGCCCGGTTCGAGGAACTGAACATGGACTTGTTCAGAAAGTGCATGGAACCGGTCGAGAAATGCATACGTGATGCCAAAATCGACGAGAGCCAAGTCCATGAGGTGGTCTTAGTGGGCGGATCGACCCGTATTCCGAAAGTCCAGCAACTTCTCCGAGATTATTTCAATGGGAAGGAGCTCTGTAAGAGCATAAACCCGGATGAGGCCGTGGCTTATGGAGCTGCAGTACAGGCTGCGATCCTAACCGGAGAAGGGGACGAGAAAGTACAAGACTTGTTGTTACTTGACGTAACGCCGTTGAGTCTAGGGCTTGAAACAGCGGGTGGGGTCATGACGGTTTTGATTCCGAGGAACACTACGATCCCGACAAAGAAAGAGCAAGTCTTTTCGACTTATTCCGACAACCAACCTGGGGTATTGATACAAGTGTATGAAGGGGAGAGAGCAAGGACAAGGGACAACAATTTGTTAGGGAAGTTCGAATTGACCGGAATACCTCCAGCCCCACGCGGGGTCCCGCAGGTTAATGTGATGTTTGACATTGATGCGAATGGGATATTGAATGTGTCTGCGGAGGATAAGACAGCCGGAGTGAAGAATAAGATAACTATAACGAACGATAAGGGGAGGTTGAGTAAGGAGGAGATAGAAAAGATGGTGCAGGATGCAGAGAAGTATAAGGCGGAGGATGAGGATGTGAAGAAGAAGGTGGAGGCCAAGAACGCGTTGGAGAATTACGCGTATAATATGAGAAATACGGTGAAGGATGAGAAGATTGCTGGGAAGTTGAGCGGAGAGGATAAGGAGATGATTGAGAAGGCGGTGGAGGAAGCGATTGAATGGTTGGATAGGAATCAGTTGGCTGAGGCTGAGGAGCTTGAGCATAAGTTGAAGGAGTTGGAGGAGGTTTGTAATCCTATTATCTCTAGGATGTATCAAGGTGGAGCTGCTGAGGATGGTGGTTATGGTGGTGGTTCCGGTGGTGGTGGACCCAAGATTGAAGAGGTTGATTGA 1920 49.38 MAQGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPENTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVRYKGEEKQFSPEEISSMVLVKMREIAEAFLGQSLKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASNKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFAEEFKRKHKKDISGNARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCIRDAKIDESQVHEVVLVGGSTRIPKVQQLLRDYFNGKELCKSINPDEAVAYGAAVQAAILTGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELTGIPPAPRGVPQVNVMFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVQDAEKYKAEDEDVKKKVEAKNALENYAYNMRNTVKDEKIAGKLSGEDKEMIEKAVEEAIEWLDRNQLAEAEELEHKLKELEEVCNPIISRMYQGGAAEDGGYGGGSGGGGPKIEEVD 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2675379 2677484 - Conep07aG0057000.1 Cone7ag0556 441152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0556 639 FunFam Heat shock protein 70 7 194 - -
Cone7ag0556 639 FunFam Heat shock 70 kDa 232 315 - -
Cone7ag0556 639 FunFam Heat shock 70 kDa protein 195 257 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 334 350 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 474 490 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 206 216 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 33 45 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 366 386 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 55 63 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 143 163 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 393 412 - -
Cone7ag0556 639 PRINTS 70kDa heat shock protein signature 5 18 - -
Cone7ag0556 639 Gene3D - 68 123 - -
Cone7ag0556 639 FunFam Heat shock 70 kDa protein 68 123 - -
Cone7ag0556 639 SUPERFAMILY Actin-like ATPase domain 193 385 IPR043129 -
Cone7ag0556 639 Gene3D - 7 381 - -
Cone7ag0556 639 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 546 IPR029047 -
Cone7ag0556 639 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 540 621 IPR029048 -
Cone7ag0556 639 MobiDBLite consensus disorder prediction 617 639 - -
Cone7ag0556 639 CDD HSPA1-2_6-8-like_NBD 6 384 - -
Cone7ag0556 639 FunFam Heat shock 70 kDa 388 542 - -
Cone7ag0556 639 Gene3D Actin; Chain A, domain 4 232 315 - -
Cone7ag0556 639 SUPERFAMILY Actin-like ATPase domain 5 188 IPR043129 -
Cone7ag0556 639 ProSitePatterns Heat shock hsp70 proteins family signature 2. 200 213 IPR018181 -
Cone7ag0556 639 Gene3D - 189 363 - -
Cone7ag0556 639 FunFam Heat shock 70 kDa protein 309 363 - -
Cone7ag0556 639 FunFam Heat shock protein 70 543 616 - -
Cone7ag0556 639 Gene3D - 542 616 IPR029048 -
Cone7ag0556 639 ProSitePatterns Heat shock hsp70 proteins family signature 3. 337 351 IPR018181 -
Cone7ag0556 639 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Cone7ag0556 639 PANTHER HEAT SHOCK PROTEIN 70KDA 6 578 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cone7ag0556 639 Pfam Hsp70 protein 6 615 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone7ag0556 639 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 541 IPR029047 -
Cone7ag0556 639 Coils Coil 573 605 - -
Cone7ag0556 639 Coils Coil 518 538 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0687 Cone-Chr16:8183776 Cone7ag0556 Cone-Chr7:2675379 1.52E-84 dispersed
Cone17ag0186 Cone-Chr17:878744 Cone7ag0556 Cone-Chr7:2675379 2.36E-86 dispersed
Cone19ag1316 Cone-Chr19:8848178 Cone7ag0556 Cone-Chr7:2675379 2.37E-109 dispersed
Cone2ag0332 Cone-Chr2:1752079 Cone7ag0556 Cone-Chr7:2675379 5.66E-84 dispersed
Cone3ag0331 Cone-Chr3:1685177 Cone7ag0556 Cone-Chr7:2675379 0 dispersed
Cone4ag0239 Cone-Chr4:1078373 Cone7ag0556 Cone-Chr7:2675379 4.52E-92 dispersed
Cone5ag0274 Cone-Chr5:1161132 Cone7ag0556 Cone-Chr7:2675379 0 dispersed
Cone5ag1163 Cone-Chr5:5226230 Cone7ag0556 Cone-Chr7:2675379 0 dispersed
Cone7ag0245 Cone-Chr7:1029916 Cone7ag0556 Cone-Chr7:2675379 3.43E-91 dispersed
Cone7ag0556 Cone-Chr7:2675379 Cone8ag0609 Cone-Chr8:5761574 1.48E-287 dispersed
Cone4ag0585 Cone-Chr4:2689220 Cone7ag0556 Cone-Chr7:2675379 5.23E-263 transposed
Cone4ag0584 Cone-Chr4:2688813 Cone7ag0556 Cone-Chr7:2675379 3.79E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0556 K03283 - gmx:100782173 1086.25