Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0557 | ATGGAAGCCAGTGCCGGACTAGTAGCCGGGTCTCACAACCGGAACGAGCTGGTTGTCATTCGTGGCCACGAAGAGCACAAACCATTGAGGAACTTGGATGGTCAAGTCTGTGAGATTTGTGGAGATGAAGTCGGACTTACTGTAGATGGAGACTTGTTCGTTGCTTGTAATGAGTGCGGTTTTCCGGTTTGCCGGCCTTGTTATGAGTATGAAAGGCGAGAAGGAAGCCAATTGTGTCCCCAATGCAAAACTCGCTATAAACGTCTCAAAGGGAGTCCAAGGGTGGAGGGGGATGACGACGAAGAGGATGTGGATGATATTGAGCATGAATTTAACATTGAAGATGATAGAAGGAAGACACATGAACATATTGCAGAGGAAATGCTTCATGGGAAGATGAGTTATGGTAGAGGTCTAGAGGATGAAGACGCCCAGTTCCCTCCTGTTATTTCTGGTGGCCGATCAGGACCGGTGAGTGGGGAGTTATCAGCACATGGTTATGGGGATCATGCTTTATCTTCTTCACTGCAGAAAAGAGTGCATCCTTATCCGGCTTCTGAACCTGGGAGTGCAAGATGGGATGGAAGGAAAGAGGAAGGCCGGAAAGAGAGAATGGATGATTGGAAACTGCAGCAAGGAAATCTCGGACCTGAATTACCTGATCATGACTTTAATGATCCGGACATGGCCATGATTGATGAAGCAAGGCAACCATTGTCAAGAAAAGTACCTATAGCATCAAGCAAAGTCAATCCTTATAGGATGGTGATTGTGGCTCGTCTTCTTATTCTAGCCTTCTTCCTTCGTTATAGACTTCTGAATCCTGTTCATGACGCCTTTGGGCTCTGGTTAACCTCCGTAATATGCGAAATCTGGTTTGCATTCTCATGGATCCTTGATCAGTTCCCCAAATGGTTCCCTATTGATCGAGAAACCTACTTGGACCGCCTCTCTCTAAGGTATGAAAGAGAGGGCGAACCTAACATGCTTTCTCCAGTGGATGTTTTCGTAAGTACTGTGGACCCTCTGAAGGAACCTCCGCTTGTTACTGCAAACACGGTCCTTTCAATCTTAGCCATGGACTACCCGTTTGACAAGATTTCGTGCTACATTTCTGATGATGGAGCTTCCATGCTCACTTTTGAAGCTCTGTCTGAAACTGCAGAGTTTGCTCGTAAGTGGGTACCTTTCTGTAAGAAATTTTCCATAGAGCCTAGAGCACCTGAAATGTATTTTACAGAGAAGATTGATTACCTCAAAGATAAAGTCCAGCCTACATTCGTCAAGGAACGTCGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTTAGGATAAATTCGCTTGTTGCGAAAGCTTTGAAAGTTCCTCCGGAAGGTTGGATCATGCAAGATGGGACACCATGGCCAGGAAACAACACAAAGGACCACCCTGGTATGATACAAGTCTTTCTGGGTCATAGTGGAGGTCTTGATACTGAAGGAAATGAACTCCCTCGACTCGTTTATGTTTCTCGTGAGAAAAGGCCTGGTTTCCAACATCACAAAAAAGCCGGTGCCATGAATGCACTGGTTCGTGTTTCGGCGGTGCTTACAAATGCTCCTTTCATGCTCAACTTGGATTGTGATCACTATATAAACAACAGCAAAGCAGTTCGTGAGGCAATGTGTTTTTTGATGGACCCACAAACTGGGAAGAAAGTATGCTATGTTCAATTCCCACAAAGATTTGACGGCATTGATAGGCACGATCGTTATGCCAACAGAAACACTGTCTTCTTTGATATCAACATGAAAGGCTTAGACGGGATTCAAGGGCCTGTCTATGTCGGGACAGGTTGTGTTTTCAGGAGACAAGCTTTATATGGTCAGGAACCTCCTAAGAGGCCAAAGCGCCCGAAAATGGTAAGCTGTGATTGCTGCCCATGTTTCGGACAGCGGAAAAAGCTTCACAAGTACTCTAAGCATGGCACCGAAGGAGCTGCTTTGGGTCTTCAAGGTGAAAAAGAGATTTTGATGTCTGAAATGAATTTTGAAAAGAAATTTGGACAGTCTGCGATTTTTGTTACCTCGACTTTGATGGAACATGGTGGGGTCCCTCCTTCCTCCAGTCCAGCTGCCCTGCTTAAAGAAGCCATTCATGTGATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGTATAGAGCTTGGTTGGATATATGGTTCAATCACGGAAGATATTCTAACGGGTTTTAAGATGCATTGCCGTGGTTGGAGGTCAATATACTGCATGCCAAAGAGACCTGCATTTAAGGGGACGGCTCCAATCAACTTGTCAGATAGGCTCAACCAAGTGCTTAGGTGGGCCCTTGGGTCGATTGAGATCTTTTTCAGTCACCACTGTCCTCTTTGGTATGGCTACAAGGGAGGGAGCCTGAAATGGCTAGAGCGATTTGCATATGCTAACACAACTATCTACCCCTTCACTTCACTCCCTCTCCTTGCCTATTGTACCCTCCCTGCCATTTGCCTTCTCACAGATAAATTCATTATGCCACCGATAAGTACTTTTGCAAGTCTTTTCTTCATTGCTCTGTTTCTTTCAATCTTTGCAACTGGAATTCTCGAGCTTAGATGGAGTGGAGTGAGCATTGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATAGGTGGTGTTTCAGCTCATCTGTTTGCTGTTGTACAAGGACTTTTGAAGGTTTTGGCTGGAATTGATACTAATTTCACTGTTACATCAAAAGCAACAGATGATGAGGATTTTGGAGAATTATATGCCTTTAAGTGGACAACTTTGTTGATTCCTCCAACTACAATATTAATCATCAATCTTGTTGGAGTTGTTGCCGGGATTTCGGATGCTATAAACAACGGCTATCAATCATGGGGTCCCCTATTTGGGAAGCTCTTCTTTGCATTCTGGGTGATTGTTCATCTCTATCCATTCCTTAAGGGTTTAATGGGAAGGCAAAACCGGACACCCACTATAGTTGTGATATGGTCCGTGCTCTTGGCTTCAATCTTCTCCTTGCTCTGGGTCCGGATTGACCCATTTGTGATGAAAACCAAGGGGCCAGATGTTAAGCAATGCGGACTCAATTGCTGA | 3120 | 44.74 | MEASAGLVAGSHNRNELVVIRGHEEHKPLRNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNIEDDRRKTHEHIAEEMLHGKMSYGRGLEDEDAQFPPVISGGRSGPVSGELSAHGYGDHALSSSLQKRVHPYPASEPGSARWDGRKEEGRKERMDDWKLQQGNLGPELPDHDFNDPDMAMIDEARQPLSRKVPIASSKVNPYRMVIVARLLILAFFLRYRLLNPVHDAFGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDVFVSTVDPLKEPPLVTANTVLSILAMDYPFDKISCYISDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFTEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINSLVAKALKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGQEPPKRPKRPKMVSCDCCPCFGQRKKLHKYSKHGTEGAALGLQGEKEILMSEMNFEKKFGQSAIFVTSTLMEHGGVPPSSSPAALLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKGGSLKWLERFAYANTTIYPFTSLPLLAYCTLPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDVKQCGLNC | 1039 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2678513 | 2682833 | + | Conep07aG0057100.1 | Cone7ag0557 | 441153 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0557 | 1039 | CDD | mRING-HC-C4C4_CesA | 35 | 85 | - | - | |
Cone7ag0557 | 1039 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 450 | 623 | IPR029044 | - | |
Cone7ag0557 | 1039 | Pfam | Zinc-binding RING-finger | 27 | 104 | IPR027934 | - | |
Cone7ag0557 | 1039 | MobiDBLite | consensus disorder prediction | 179 | 204 | - | - | |
Cone7ag0557 | 1039 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 347 | 863 | IPR029044 | - | |
Cone7ag0557 | 1039 | FunFam | Cellulose synthase | 450 | 624 | - | - | |
Cone7ag0557 | 1039 | FunFam | Cellulose synthase | 19 | 110 | - | - | |
Cone7ag0557 | 1039 | Pfam | Cellulose synthase | 333 | 1033 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Cone7ag0557 | 1039 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 83 | IPR001841 | - | |
Cone7ag0557 | 1039 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 239 | 1008 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Cone7ag0557 | 1039 | SUPERFAMILY | RING/U-box | 22 | 107 | - | - | |
Cone7ag0557 | 1039 | Coils | Coil | 431 | 451 | - | - | |
Cone7ag0557 | 1039 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 109 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag1326 | Cone-Chr3:32196988 | Cone7ag0557 | Cone-Chr7:2678513 | 8.48E-133 | dispersed | |
Cone6ag0945 | Cone-Chr6:4926527 | Cone7ag0557 | Cone-Chr7:2678513 | 0 | dispersed | |
Cone6ag1303 | Cone-Chr6:10472077 | Cone7ag0557 | Cone-Chr7:2678513 | 0 | dispersed | |
Cone7ag0557 | Cone-Chr7:2678513 | Cone7ag1458 | Cone-Chr7:10292094 | 0 | dispersed | |
Cone4ag0586 | Cone-Chr4:2691877 | Cone7ag0557 | Cone-Chr7:2678513 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0557 | K10999 | - | vvi:100248512 | 1928.29 |