Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0559 ATGCAGCAGGGTGATCAGACGGTGCTTAGCTTGAGACCTGGTGGCCGTGGCGGCAGACTTCTTGGTCCTCGCTTCGACTCCTCTTCGTCTTCTTCTGCTTCGGCATCTTCCTTTTCCTTTGGTTCTATTTCATCGGATCTCCCTCTGCTACGTCCGCATGACGGCGCTCCTCATTCTTTCTCCCTAAAGATAGGAGACTTTGATGGTCATCAGCTGGTACGCTACACGAAGGATCAGCTATTACAACTTAGGGAGGCTTCTGCAGTTCCAGATGCTATCTGGGAAATTAAACGAGAAATTGAAGCTGAGCTTTTTGGTGAGGACCAAAACTGGGGGCGTGTGGAGAGTAATCCCCCAATTCAATCCCAAACTCGTTATTCTGAGCCAGATAACCGTGATTGGCATGGCCGATCTGCACTATTTTCTACCCCTGGAGATGAGAGATCTTGGGATACTATCCGCGATAGAGAATCAGGTGGTCGTTTTGACTCAAGGCAGTCAGAGGCAACTCAATTTGCGAGGCCAAATATCTCTTTGAACCAAGTGGGAGGACCTGCTCCTGCTTTAGTCAAGGCTGAGATACCATGGTCAGCAAGGAGGGGAACTCTCTCTGAAAAGGACCGTGTTCTGAAGACAGTAAAGGGGATACTGAACAAGTTGACACCAGAGAAGTTTGATCTTCTCAAGGGTCAGCTAATAGACTCTGGCATTACCTCAGCTGATATTCTAAAGGGGGTCATTTCACTGATCTTTGACAAGGCAGTGCTTGAGCCCACGTTTTGCCCAATGTATTCTCTTCTGTGTTCCGATCTCAATGAAAAGCTGCTTCCTTTTCCAGCTGAAGAACCAGGTGGAAAAGAAATTACTTTTAAGCGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTTCTGGGAAACTGAGGGACGAAGTGAGACTGATGACCGCCCCAGAACAAAAGATGGAGCGTAGGGACAAGGAAAGACTGATCAATCTCCGTACCCTTGGAAATATCCGACTAATTGGGGAACTCCTGAAGCAGAAAATGGTGCCTGAGAAGATTGTCCATCACATTGTTCAGGAGCTTCTAGGACCTGATGATAAAACCTGTCCAGCAGAAGAGAATGTAGAGGCCATTTGTCAGTTCTTTAACACTATTGGAAAGCAACTTGATGAGGGCATAAAATCACGCCGAATCAATGACATGTACTTTAGTCGGCTGAAGGAACTGTCTAAACACCCTCAATTAGCTCCACGGCTGAGGTTCATGGTCCGTGATGTTATTGATTTACGCTCCAACAATTGGGTTCCTAGACGCGAAGAGGTGAAAGCCAAAACTATTAGTGAAATCCATTCCGAAGCAGAAAAGAATCTTGGACTTCGCCCTGGTGCTACTGCAAGTATCAGAAACAACCGTGGCTCCATGTCTGGTTCTCCTGGAAATTCGAGCCCTGGAGACTTTCCCATCAATCGACCCGGATCAGGAGGAATGATGCCCGGAATGCCCGGAACCAGGAAGATGCCCAGGATGCCCGGAATGGATAATGACAATTGGGAGGTACCCAGGATGCGATCAATGCCAAGAGGTGATGGGTCTGGGGGGGCCCAACTGTTCAATAAATCATCACCACTGAACACAAGGCTACTACCTCAGGGCAGTGGTGCTGGTCTCGTTGGGAAACCTTCTGCCCTTTTGCAAGGGGCGAGTCCATCTCCTACTTGGCTCGAGCCTTCTGTTCAGGCTCCAGCTTTTGAAAGGCCACAGGTTCCAGTTTCTAAGTTGAATCCAGACGGTCTTAAGAGGAAAACTAAATCCCTTCTGGAAGAATACTTCAGTGTTCGGCTTTTAGATGAAGCTCTACAGTGTGTGGAGGAATTAAAGTCACCAGCTTACCACCCTGAGGTTGTAAAGGAGGCTATTTATCTAGGACTCGAGAAAAGTCCTCCCTGTGTTGAAGCAGTGGTAAAGCTTCTAGAATATTTGCTTGTTAAGAAAGTTCTCACGGCTACAGATATAGAAACCGGGTTCTTTTCGTATGCTTCTATGCTGAATGATGTGGGTATTGATTCACCAAAAGCACCGAGTAATTTCGGTGAAATTCTCGGGAAACTGATAATATCAGGTGGATTGGAATTTAAGTTGGTGAAAGAGGTGCTGAAGAAAGTGGAAGATGATTGGTTCCAGAAAGCTGTATTTGATTCAGTGGTAGGGTCCATCACTTCTAGTTCATCCGGGCAAGGTTTGTTGGATTCACATGCATCAGAGGTTGAGGCCTGTCGGAACCTGTTACAGTAG 2298 46.95 MQQGDQTVLSLRPGGRGGRLLGPRFDSSSSSSASASSFSFGSISSDLPLLRPHDGAPHSFSLKIGDFDGHQLVRYTKDQLLQLREASAVPDAIWEIKREIEAELFGEDQNWGRVESNPPIQSQTRYSEPDNRDWHGRSALFSTPGDERSWDTIRDRESGGRFDSRQSEATQFARPNISLNQVGGPAPALVKAEIPWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYSLLCSDLNEKLLPFPAEEPGGKEITFKRVLLNICQEAFEGSGKLRDEVRLMTAPEQKMERRDKERLINLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDDKTCPAEENVEAICQFFNTIGKQLDEGIKSRRINDMYFSRLKELSKHPQLAPRLRFMVRDVIDLRSNNWVPRREEVKAKTISEIHSEAEKNLGLRPGATASIRNNRGSMSGSPGNSSPGDFPINRPGSGGMMPGMPGTRKMPRMPGMDNDNWEVPRMRSMPRGDGSGGAQLFNKSSPLNTRLLPQGSGAGLVGKPSALLQGASPSPTWLEPSVQAPAFERPQVPVSKLNPDGLKRKTKSLLEEYFSVRLLDEALQCVEELKSPAYHPEVVKEAIYLGLEKSPPCVEAVVKLLEYLLVKKVLTATDIETGFFSYASMLNDVGIDSPKAPSNFGEILGKLIISGGLEFKLVKEVLKKVEDDWFQKAVFDSVVGSITSSSSGQGLLDSHASEVEACRNLLQ 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2686118 2691570 + Conep07aG0057300.1 Cone7ag0559 441155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0559 765 MobiDBLite consensus disorder prediction 455 556 - -
Cone7ag0559 765 MobiDBLite consensus disorder prediction 468 489 - -
Cone7ag0559 765 MobiDBLite consensus disorder prediction 1 34 - -
Cone7ag0559 765 Pfam MA3 domain 600 711 IPR003891 -
Cone7ag0559 765 ProSiteProfiles MI domain profile. 599 721 IPR003891 -
Cone7ag0559 765 SUPERFAMILY ARM repeat 203 438 IPR016024 -
Cone7ag0559 765 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 74 762 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Cone7ag0559 765 SMART if4_15 210 435 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone7ag0559 765 Gene3D - 201 436 - -
Cone7ag0559 765 SMART ma3_7 600 712 IPR003891 -
Cone7ag0559 765 MobiDBLite consensus disorder prediction 536 550 - -
Cone7ag0559 765 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 436 - -
Cone7ag0559 765 MobiDBLite consensus disorder prediction 148 163 - -
Cone7ag0559 765 SUPERFAMILY ARM repeat 595 754 IPR016024 -
Cone7ag0559 765 Gene3D - 593 758 - -
Cone7ag0559 765 Pfam MIF4G domain 210 435 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone7ag0559 765 MobiDBLite consensus disorder prediction 111 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0426 Cone-Chr7:1891171 Cone7ag0559 Cone-Chr7:2686118 8.91E-45 dispersed
Cone17ag0976 Cone-Chr17:7547006 Cone7ag0559 Cone-Chr7:2686118 0 wgd
Cone2ag0587 Cone-Chr2:3423742 Cone7ag0559 Cone-Chr7:2686118 4.79E-99 wgd
Cone20ag0318 Cone-Chr20:1410362 Cone7ag0559 Cone-Chr7:2686118 2.58e-315 wgd
Cone4ag0588 Cone-Chr4:2701407 Cone7ag0559 Cone-Chr7:2686118 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0559 K03260 - vvi:100260481 1006.51