Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0569 | ATGGCCGAGCACGAGAACGGCGAGGCTCACGAGGCGGAAAACTCGAAGCTAGACGAAGAACAGGAAGAAGGGGACGAAGGAGATGGAGTATCGGGGGAAGAATTAGGGGGACAGGTCGGCGAGTCGCGTCCGGCGGAGGTAGTGAGCTGTTTGGGAGCCGGTGAAGTGAAAGTCAAAGGATCTGGTTTGGAAACCCTAGAGCGACCTACCGCTCTTCAATCATCCTCGGTGAACGGTCAATCTGAAGGTTTGCTTGAGATTTCTGCTTCACAGTCGGCTGGAGTTCCTGGAGTCAAGGATCAAGATGGGGTTTCTCGTGATGAAGTTTCATTTTGTGCAACATCTCAGGCAGCTCAAGCTCAGACTCAAAGTCAACTGCAGTTGTCAAACTGTGTAACGCCTCCATCTCAACAATCGCCTACGTCAGTTACACAGTCTATCTCATCTGCCCCAAGCCCGACTCTATTAGAACAAAGAAAATTGCCACCTTTAAAGATCATTAAGGAATGCAAGCCTGTGCCAAACCCACTGAAATCTTCTAAAACCACACCTTCTCTGCCCACAGTAAGGACGCCTAGTTCTGATGGGTACAACTGGAGGAAATATGGGCAGAAGCAAGTGAAGAGTCCTAAAGGTTCTCGTAGCTATTACAGATGCACACATGTGGAATGCTGTGCTAAGAAGATCGAATGCTGTGATCACTCAGGCCATGTTACAGAGATTGTTTACAAGAGTCAGCACAGCCATACCCCTCCTAGGAAGATTAACAGTTCAAGGGAAAGCAAGGTCGTTTCATCTGCTGAGCCTGTTGTTAGGAACATTATTACAGAACACTCCAATAGGATAATTAATGATTCTGATCCGTCCACATCTTCAAAAGAACATGTACAAGATACAACTTCAGTTCCTGCAAGAAAGCGGCAGTACTCTAGTGACTTGGTCGTAAATGTTGAGAATATAGTCAAAGAGGAGAATAATGCTAATGAACCTGAGCCAAAGCGGAGGCAAAAGAAAAGCAACGTAGAGTATCCTGATTCTATTGTAAAAGTTGGCAAGAAGCCTAAATTCGTAGTGCATGCGGCTGGTGATGTGGGGATCTCTGGTGATGGATACAGATGGCGCAAATATGGACAGAAAATGGTGAAGGGTAATAGTCACCCCAGAAACTACTACAGATGCACATCTGCGGGATGTCCTGTTCGTAAACATATTGAAACCGCCATAGATAATCCCAATGCAGTAATTATAACATACAAGGGAATACACGACCACGACAAGCCAGTACCAAAGAAAAGACATGGACCACCAAGTGCTTCTCTTGTTGCTGTTGCAGCTCCAACATCCATGAACAATATACAGACGAAGAAAACGGACACTGCCTCAACACAGTGGTCAGTTGACCCAGAAGGAGAGTTAACTGGAGAGGCCTTGGACCTTGGAGGTGAGAAGGCAATGGAATCAGCCAGAACACTTTTAAGCATTGGATTTGAAATCAAGCCTTGCTGA | 1506 | 46.15 | MAEHENGEAHEAENSKLDEEQEEGDEGDGVSGEELGGQVGESRPAEVVSCLGAGEVKVKGSGLETLERPTALQSSSVNGQSEGLLEISASQSAGVPGVKDQDGVSRDEVSFCATSQAAQAQTQSQLQLSNCVTPPSQQSPTSVTQSISSAPSPTLLEQRKLPPLKIIKECKPVPNPLKSSKTTPSLPTVRTPSSDGYNWRKYGQKQVKSPKGSRSYYRCTHVECCAKKIECCDHSGHVTEIVYKSQHSHTPPRKINSSRESKVVSSAEPVVRNIITEHSNRIINDSDPSTSSKEHVQDTTSVPARKRQYSSDLVVNVENIVKEENNANEPEPKRRQKKSNVEYPDSIVKVGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNSHPRNYYRCTSAGCPVRKHIETAIDNPNAVIITYKGIHDHDKPVPKKRHGPPSASLVAVAAPTSMNNIQTKKTDTASTQWSVDPEGELTGEALDLGGEKAMESARTLLSIGFEIKPC | 501 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2732336 | 2735335 | - | Conep07aG0058300.1 | Cone7ag0569 | 441165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 67 | 88 | - | - | |
| Cone7ag0569 | 501 | Gene3D | WRKY domain | 352 | 428 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | Gene3D | WRKY domain | 182 | 253 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | SMART | WRKY_cls | 367 | 426 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | SMART | WRKY_cls | 193 | 251 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 324 | 342 | - | - | |
| Cone7ag0569 | 501 | FunFam | WRKY transcription factor | 353 | 428 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 176 | 197 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 321 | 343 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 58 | 106 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 244 | 267 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 129 | 155 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 172 | 197 | - | - | |
| Cone7ag0569 | 501 | SUPERFAMILY | WRKY DNA-binding domain | 191 | 252 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 129 | 157 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 244 | 264 | - | - | |
| Cone7ag0569 | 501 | ProSiteProfiles | WRKY domain profile. | 194 | 252 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 92 | 447 | IPR044810 | GO:0003700(InterPro) | |
| Cone7ag0569 | 501 | MobiDBLite | consensus disorder prediction | 280 | 309 | - | - | |
| Cone7ag0569 | 501 | Pfam | WRKY DNA -binding domain | 369 | 425 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | Pfam | WRKY DNA -binding domain | 195 | 249 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | ProSiteProfiles | WRKY domain profile. | 362 | 427 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cone7ag0569 | 501 | SUPERFAMILY | WRKY DNA-binding domain | 363 | 427 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone7ag0569 | Cone-Chr7:2732336 | Cone9ag0026 | Cone-Chr9:128238 | 1.74E-45 | dispersed | |
| Cone4ag0599 | Cone-Chr4:2739002 | Cone7ag0569 | Cone-Chr7:2732336 | 0.00E+00 | wgd | |
| Cone4ag1749 | Cone-Chr4:12857921 | Cone7ag0569 | Cone-Chr7:2732336 | 6.23E-08 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 46480 | PF01369 | Sec7 | 9.70E-67 | No_clan | Cone | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0569 | - | - | - | 0.0 |