Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0573 ATGGCATTTGATCAGAACTCGATTCCTAAAGACCTACGTCCGATAAATGTAGCTAGAACTGTTAGTGAAGAGCCTCGCATTGTTCCTCCACCTGCTACTACTATAATTGCTCGAAATCCAGAAGGATTTGTCACCAGCTCTGTCCTAGATGGTGGGAGCCCTGAGTCGGCAACTGTTTATTACCCTTCACCAGTTTCTGATGCTGGGTTTGTAGGAGTAGGATATGGAAATTTGGTTCCTCCAACTGTTTCCCAGTGGGGTCCACGTATGCTTGCCCCAGTTAGTCATCCAGCATTTACCCCTGTGGTTGGGTTTGGGTATAGTCCCAGTCCTGTTGTTGTTAATCCCGGGATTGCTTCTGATATTACGTATAGTGGCATGGCAACTGGGTTTCCCGATAATCAGAATTTGAGCAATCAAGTTGGGGGCAGTGGCATGGATCTTGCCGGCAATGATTTCTCTGCTAGGTTAAATTTCAATCCTGGTTTGGTCAGTAGGGTTGGTAACAATGCTGTGGATCAGACTAGTATTGATACGTTTAGGGGAGTTGGTTATAGCCCCAGTTCGGCCAACCGGTCCGATCAAATGAGTGAAGAATCTGGAGATGATTCCGTGTCAGGGAAGAAGATAAAGTTCTTGTGCAGTTTTGGGGGAAAGATTTTGCCTAGACCAAGTGATGGGAAGTTGAGATACGTCGGCGGGCAGACAAGGATTATTAGTGTGAGAAGAGATGTGCACTTCAATGAGATGGTGCAAAAGATGATGGATACTTATGGACATCCAGTCGTTATTAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGATTTCTGTTTCGTGTCCGGACGATCTTGATATTATGTTGGATGAATTTGAGAAGTTGGTCGAGAGGTCCTCAGATAGTTCAGCTAAGTTGAGGCTGTTTTTATTTTCCGCTTCAGAACTTGATCCTTCTGGTATGGTGCAGTTCAGGGATTTACATGATAGTGGTCAAACATATGTTGATGCAGTGAATGGGATAATAGATGGTCCTCGTGGTCCAATTGCAAGAAAGGAGAGTTTAGAAAGTGGTACGTCAATGCAAAATTCTGATTATGGTGGGAGTGAGCCTGTGGATGGCTCTATTCATGGTCAAGTAGATGCTAGTGCGGCTCAAATAACTACTGATATATTATCACCTAGAGAAAACTTTGGCACTCCACACGACACTGCTTCAGGTAGAATGAGCGAGTCTTCCCACCATGCCATTCTTCTAGATACTTCTTCAGTTCAACTGGGGTTTCCTGTTGTTAAGTCTGGTCCTCTTCCTCCCCAGACTTCATATTCTCAGTCTAAGGTTGAGGTGCAAAGTTCTGTGCCTCTTACTATATCAAATCAGCAAATGGGGATGCAGCAACCTAGAACCGAGTTTGCACAACCTAAACCTCACTTGCAGGCTTATGTTGATCCTCGCCAAGAACCACGTGTGGACCATGTACAATATCCTCCACTTCTGGGGTTTCCAAACCCTCAGCTATTAGGGACTTCTCGGCCCATGTATGCCCAACTGCAAGTCCATGAGAATACTGCTGGAGTTGCACCTCATCAGTTTGTTCATTCAGTGCACATGACAATGGGCCCCCCATCGCCTCATGTCAATATGAGGCCAAATGAGGTCCAACCATTGATGCAACCTCGGTTGGATCGTTATGCCGAGGAGAGCACATTTGGTCCGAGGGTTGTCCAGCTTCCTCCAGATCAAAGTTACAACTCGTATCACGTTGAGGTCCCCTCTCCTATGGTTGCTGACAGACTTGGTTGGCATCAGGTTACACCCTCATTCGAGCATGTATTTCCTGCTGGTGGATTAGTACATCATCCACAGGTAAAGGTTCCTGAGAAATTTGTAAGGGTGGAGAACTGTTATATGTGTCAGAAAGCATTGCCTCATGCACATTCTGATATTGTAGCAGAGGATCAAAGAGATGGTGGTGCAAGTCCTGTATCTGATACAAGCTTAGTTTATCATAGTCTCCATTTGGAAGATAATTCAAGAGCTCAGCCACTGAACAGGGTCGCTGTATCTGGAGCATTGGGTGAATACGTTGTTGAACCAGGTGGTGTTACTCAACCTGGAGTCCTTGGGCATGGAGGTAATCAAGTTAGAATACCCCCATCAGAGGCAACTGGTATGTCACGTAATCTACTGCCTCAACAGGGAAATGAGAGACTTGTTCTTCAAGAGGGACATAATCCAGACCATCTTAGGATATCAGCTCTGCCGGATGCTATTGTGAGGAGGGTAGGTGAGGTTCAATCCCCTTATAATGCAGTTATAGGCGCTGCTCCTCAGTTTGTCCCAGATGGTGCTTTCCAAAAGCATCTAATGCAAGTACGATCCCAGGCTACACCGTACGCCACCCAACCTCTTAGTAATGATATATCTACTGATGGTGGAGATGCTAGTATTCAAACTTCAGAGCATTTCTTATCTCCAAAAGAATATTCTGAAAAACTTTCAGGCATGTTCTCGAAAGATGGTGCTTCTGACACTCGTATTTCAAATCACCATCTCAGACCAATTGATGGGAATATGGGAACACTAAGGTTATTCTCCAATGATTCTTGTGATACTTCGGACTGTAGCAAGTCAGCTGGGAAAGAAGTTGGAAAGGTTGATAACCTTGATCAGAAGTTGCAGAAAGTTACAGGGAGAGGCAAAATGGTTGTAGAAATGAATCAGAGCAACGCAACCGAAGTTCCGGTTTGTTCCTCATCACAAGTTCTATTTGTGCTAAATTCTCGACCACTGGAGTCTGTTGAGGGCACAAAATTACCTGTTTGGGGTAATCCTGATCCATTTCAACAATCAAAAATTGGAAACAATTACTTGGAATCCGATGAAATTCAATATGGGAAAACCCCTCCATATTTTGGTGTTGAGGCTAATCATCTAACGGATGGGATCCCAGCGTCCGCTGAACAGAAGGCTGATGCCGCCCTTTTCCGACCCAATTTGGTACCTAGTAATGTTGAAGCTACTACCAACAAGAATGGTGATATGCAGGACTCTTCGAGCTCACTCTTCAGCAATCAGGATCCTTGGAATCTACATCATGACACTCATCTTATGCCTCCTAGAACTAATGAACTTGATTCCAGAAAAGAAGCCTTTCCCTCTGGGGACCCCTTTGTTGGGACACATATTCAAAACTTCGGAGAGCTAAGAACAGCTACACAAGTGGAGGATGGATTTGATCAGCAATTGGGTAATTTCAATAAGGATTCAAATTCAGAGCATGTTCAGTCTGCTAAAGACTCTGCTGGTTCAGCAGAGGAACAGATAAAGCAAGATCTTCAAGCTGTTGCTGAGGGAGTGGCTGCTTCTGTTCTTCAGTCAGCGACATCTTCTAACCCTGATTCACAGGAAAAGAATGAGCCCATGTCTGGTGCCTCTCAAGAGGGAGATGTTGGAAATGTCAATGTAGACTTGCAGCCTAAAACTCAAATTGAGGTGGAGAAAAGAACCAAATTACCAGAAAAGGCAAATCTTGGTTTTCCAGTCTCAGCTAGCATTGGCCGCTTGCAGATCATAAAGAACAGCGACCTTGAAGAGCTAAGAGAATTGGGTTCTGGAACCTTTGGCACTGTTTATCATGGGAAGTGGAAGGGGACCGATGTTGCAATTAAACGGATTAATGATAGGTGCTTTGTTGGGAAGCCATCAGAACAGGATCGCATGCGAGAGGATTTCTGGAATGAAGCTGTTAATCTTGCTGACCTTCACCATCCAAATGTGGTTGCTTTCTATGGTGTTGTACTAGATGGCCCTAGTTCTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGCTCACTCAGAAATGCTTTGCAGAAGAATGAGAATTCACTCGACAAGCGCAAGCTTCTCTTGATCGCTATGGATGTAGCCTTTGGAATGGAGTATCTGCATGGAAAGAATATAGTGCACTTTGATTTGAAAAGTGACAATTTACTGGTCAATCTTCGAGATTCGCATCGCCCAATATGCAAGGTTGGTGATTTGGGCCTATCCAAGGTAAAATGTCAGACACTGATATCAGGTGGTGTTCGTGGAACACTTCCATGGATGGCACCAGAGCTTTTAAATGGTAGTAGCAGCCTTGTCTCTGAGAAGGTTGATGTATTCTCATTCGGTATTGTTTTGTGGGAACTCCTTACCGGAGAAGAACCATATACAGATTTGCACTATGGGGCTATCATAGGTGGTATAGTAAGCAACACATTAAGGCCACCTATCCCAGAATATTGTGACCGAGAATGGAAATCATTAATGGAGAGATGTTGGTCATCAGAGCCGTCTGAACGGCCAAGCTTTACTGAAATCGCGAATGAATTACGTTCAATGGCTTCTAAGACTCCTCCCAAAGGGCAGAATCAACAACATTCTCCAGCTCAGAAGTGA 4446 44.49 MAFDQNSIPKDLRPINVARTVSEEPRIVPPPATTIIARNPEGFVTSSVLDGGSPESATVYYPSPVSDAGFVGVGYGNLVPPTVSQWGPRMLAPVSHPAFTPVVGFGYSPSPVVVNPGIASDITYSGMATGFPDNQNLSNQVGGSGMDLAGNDFSARLNFNPGLVSRVGNNAVDQTSIDTFRGVGYSPSSANRSDQMSEESGDDSVSGKKIKFLCSFGGKILPRPSDGKLRYVGGQTRIISVRRDVHFNEMVQKMMDTYGHPVVIKYQLPDEDLDALISVSCPDDLDIMLDEFEKLVERSSDSSAKLRLFLFSASELDPSGMVQFRDLHDSGQTYVDAVNGIIDGPRGPIARKESLESGTSMQNSDYGGSEPVDGSIHGQVDASAAQITTDILSPRENFGTPHDTASGRMSESSHHAILLDTSSVQLGFPVVKSGPLPPQTSYSQSKVEVQSSVPLTISNQQMGMQQPRTEFAQPKPHLQAYVDPRQEPRVDHVQYPPLLGFPNPQLLGTSRPMYAQLQVHENTAGVAPHQFVHSVHMTMGPPSPHVNMRPNEVQPLMQPRLDRYAEESTFGPRVVQLPPDQSYNSYHVEVPSPMVADRLGWHQVTPSFEHVFPAGGLVHHPQVKVPEKFVRVENCYMCQKALPHAHSDIVAEDQRDGGASPVSDTSLVYHSLHLEDNSRAQPLNRVAVSGALGEYVVEPGGVTQPGVLGHGGNQVRIPPSEATGMSRNLLPQQGNERLVLQEGHNPDHLRISALPDAIVRRVGEVQSPYNAVIGAAPQFVPDGAFQKHLMQVRSQATPYATQPLSNDISTDGGDASIQTSEHFLSPKEYSEKLSGMFSKDGASDTRISNHHLRPIDGNMGTLRLFSNDSCDTSDCSKSAGKEVGKVDNLDQKLQKVTGRGKMVVEMNQSNATEVPVCSSSQVLFVLNSRPLESVEGTKLPVWGNPDPFQQSKIGNNYLESDEIQYGKTPPYFGVEANHLTDGIPASAEQKADAALFRPNLVPSNVEATTNKNGDMQDSSSSLFSNQDPWNLHHDTHLMPPRTNELDSRKEAFPSGDPFVGTHIQNFGELRTATQVEDGFDQQLGNFNKDSNSEHVQSAKDSAGSAEEQIKQDLQAVAEGVAASVLQSATSSNPDSQEKNEPMSGASQEGDVGNVNVDLQPKTQIEVEKRTKLPEKANLGFPVSASIGRLQIIKNSDLEELRELGSGTFGTVYHGKWKGTDVAIKRINDRCFVGKPSEQDRMREDFWNEAVNLADLHHPNVVAFYGVVLDGPSSSVATVTEYMVNGSLRNALQKNENSLDKRKLLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDSHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYTDLHYGAIIGGIVSNTLRPPIPEYCDREWKSLMERCWSSEPSERPSFTEIANELRSMASKTPPKGQNQQHSPAQK 1481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2753867 2760218 + Conep07aG0058700.1 Cone7ag0573 441169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0573 1481 ProSitePatterns Protein kinases ATP-binding region signature. 1203 1234 IPR017441 GO:0005524(InterPro)
Cone7ag0573 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1285 1476 - -
Cone7ag0573 1481 SUPERFAMILY Protein kinase-like (PK-like) 1185 1459 IPR011009 -
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 393 413 - -
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 1126 1154 - -
Cone7ag0573 1481 Pfam PB1 domain 226 312 IPR000270 GO:0005515(InterPro)
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 1458 1481 - -
Cone7ag0573 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1190 1284 - -
Cone7ag0573 1481 Gene3D Phosphorylase Kinase; domain 1 1190 1284 - -
Cone7ag0573 1481 CDD PB1_UP2 213 311 - -
Cone7ag0573 1481 CDD STKc_MAP3K-like 1203 1460 - -
Cone7ag0573 1481 SUPERFAMILY CAD & PB1 domains 225 315 - -
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 1446 1481 - -
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 183 205 - -
Cone7ag0573 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 229 313 - -
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 346 376 - -
Cone7ag0573 1481 Gene3D - 228 313 - -
Cone7ag0573 1481 PANTHER SERINE-THREONINE PROTEIN KINASE 187 1463 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone7ag0573 1481 PRINTS Tyrosine kinase catalytic domain signature 1431 1453 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 PRINTS Tyrosine kinase catalytic domain signature 1279 1292 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 PRINTS Tyrosine kinase catalytic domain signature 1316 1334 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 PRINTS Tyrosine kinase catalytic domain signature 1387 1409 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 SMART serkin_6 1197 1463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 Gene3D Transferase(Phosphotransferase) domain 1 1285 1481 - -
Cone7ag0573 1481 SMART PB1_new 224 313 IPR000270 GO:0005515(InterPro)
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 355 369 - -
Cone7ag0573 1481 Pfam Protein tyrosine and serine/threonine kinase 1199 1460 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 ProSiteProfiles Protein kinase domain profile. 1197 1464 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0573 1481 MobiDBLite consensus disorder prediction 1084 1108 - -
Cone7ag0573 1481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1322 1334 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0374 Cone-Chr7:1633463 Cone7ag0573 Cone-Chr7:2753867 3.02E-134 dispersed
Cone7ag0573 Cone-Chr7:2753867 Cone8ag0327 Cone-Chr8:1876727 2.41E-49 dispersed
Cone9ag1040 Cone-Chr9:5586984 Cone7ag0573 Cone-Chr7:2753867 7.15E-26 dispersed
Cone7ag0573 Cone-Chr7:2753867 Cone1ag0344 Cone-Chr1:2754154 1.49E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83016 PF06694 Plant_NMP1 9.10E-191 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0573 - - - 0.0