Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0583 | ATGGCAGTTCAATTGAGTCTAAGTAACGTTGCCTTGTTCTGCAATGTGCAACTCACAAAAGATGATGTCGGAATATGCGCATCAGACATTAGGCTGGACAACACCACAACTATTGCAGTTGCCTTCCCGAAGGGCAAAAAGACCTACAACGTCAATGGCAAAGAGATGGAAGGATGGTTTGCTAAAGACTTCACTTCTAAAGAGCTTTACGACCAAGTTTCTTTGACTCAGAGCATATTCTCTAGGCCGAGTACATTTGATGGCACATTGCCCATATCAGCAGTTGATGATGTTGCAGGACTCAAACCACCCCAATTCTGGTTAAGCATGCCGTACGATCAATTTTACGCCCAAAACAATCTAAGTGGGGTTGAATTCATCAAAAATTCCATGAGAGGTTTAAGAGCAAATTACCTCTCCTCTCCCGAGATTAACTTCTTGAAGGCTGTGAACGGACAAGTGAACAAGATGAGGACAAAGCTTATTTTCCAGTTACTTGACGCCGAAATGGTCGAACCTACAAGCAATCAAAAATACGGATCATTTGCCAAAAACCTTTCCTTTGTCAAGACAATTGCTTCTGGAATCCTTGTCCCAAAAGAATATATATGGCCCGTGGCAAAGAGATACTTGAGCAATCCTACTAGTTTAGTGATAGATGCTCATAAAGAAGGGCTAGAAGTATATGCTTCCGGTTTTGCAAATGATCTCTTCTCAAGTTACAATTATAGTTTTGATCCGACAAATGAGTACCTTCAATTCATTCATAATGGCGAGTTTGCTGTTGATGGTTTCCTTACTGATTTCCCTCCTACAGCATCAGAGGCAATTGCATGCTTTGCAAATGACAAGAATGCTACAGCTGCTAAAAGGGCAAAAACTCTGATCATAACCAGCAATGGGGCGAGTGGAATTTACCCTGGAGGCTCTGATCTTGCATACCAGCAGGCAGTGGATGATGGAGCAGATATAATAGATTGCTCTGTCCAATTATCTAAAGATGGAGTTGCTTTCTGCTTAGATTCAGCAGATCTCATTGGGAAAACCACTGCCACTACTTCCTTCATGTCCCGTAGTGCCACTGTAAATGAAATTCAACCCAACGCTGGAATCTTTTCGTTCGATCTCATGTGGACTGAAATTGAAACCTTGAAGCCTCAACTGGTGAGCCCTTACTTGAATCCTGGAGGATTTGAAAGAAACCCGGCTCACAAGAACAAGGGCAAATTCGTCACCCTCAATGAATTCTTGGAGTTTGCTAAGACAAAGGCAGTATCAGGTGTTTTGATCAACATCAAGAATGCTGGATATCTTGCATCAAACAAGGGTCTAGACATAGTGGGTACAGTGACCTCAGCCCTAAGCAATGCCACCTTTGACAGGCAATCGACTCAACAAGTTCTTATTCAATCAGACGATTCTTCGGTTCTAATGAAGTTCAAGGATGTACAAACCTATAAAAGAGTCTTGGCTCTCGATAAGAAAATAGGCGATGCACCTAAGGATACAGTAGCAGAGGTTAAGAAGTATGCTGATGCAGTCAATGTACCTAGAGCCTCTATCATGAAGGTTTCTGACTCCTTCACCACAGGCTTAACCAATGTGGTGAATAAAATGCATGCAGCAAACATCTCAGTATATGTCAATGTTCTGAGGAACGAATACATCACACTAGCTTTTGATTATTTCTCAGACCCCATTGTTGAAGTAGCTACTTATGTTCAATTGGCTAAAGTTGACGGGATTGTGACCGAATACCCAGGAACTGCCAGCAAATACATGAAAAGCCCATGCACAGATACAGATCCAAAAGCTAAAGTACCATATAGCATCTTACCAGCCGAACCTGGTTCTTTGCTATCTGCGGCTGCACCGGAAGCTCAACCACCGGCCACAAAACCAAATCCACCTCTAGTAGAAGCTGACGTGGTTGACCCACCACTCCCACCCGTAGACACTTCCAAAAAAGCCCAGACTCTGATTCCAGATTCTACTACGCCAACAGCTACCGATTCTGAGGCCTCTGCTCCTTCAAGTGCTTTGGCTAATGTTGCTAACCTGGGTCTATCTCTAGTTGTTATTTTGGTTCTCGGCTTGCTCTAA | 2103 | 43.08 | MAVQLSLSNVALFCNVQLTKDDVGICASDIRLDNTTTIAVAFPKGKKTYNVNGKEMEGWFAKDFTSKELYDQVSLTQSIFSRPSTFDGTLPISAVDDVAGLKPPQFWLSMPYDQFYAQNNLSGVEFIKNSMRGLRANYLSSPEINFLKAVNGQVNKMRTKLIFQLLDAEMVEPTSNQKYGSFAKNLSFVKTIASGILVPKEYIWPVAKRYLSNPTSLVIDAHKEGLEVYASGFANDLFSSYNYSFDPTNEYLQFIHNGEFAVDGFLTDFPPTASEAIACFANDKNATAAKRAKTLIITSNGASGIYPGGSDLAYQQAVDDGADIIDCSVQLSKDGVAFCLDSADLIGKTTATTSFMSRSATVNEIQPNAGIFSFDLMWTEIETLKPQLVSPYLNPGGFERNPAHKNKGKFVTLNEFLEFAKTKAVSGVLINIKNAGYLASNKGLDIVGTVTSALSNATFDRQSTQQVLIQSDDSSVLMKFKDVQTYKRVLALDKKIGDAPKDTVAEVKKYADAVNVPRASIMKVSDSFTTGLTNVVNKMHAANISVYVNVLRNEYITLAFDYFSDPIVEVATYVQLAKVDGIVTEYPGTASKYMKSPCTDTDPKAKVPYSILPAEPGSLLSAAAPEAQPPATKPNPPLVEADVVDPPLPPVDTSKKAQTLIPDSTTPTATDSEASAPSSALANVANLGLSLVVILVLGLL | 700 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2797196 | 2800352 | + | Conep07aG0059700.1 | Cone7ag0583 | 441179 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0583 | 700 | CDD | GDPD_SHV3_repeat_2 | 295 | 593 | - | - | |
| Cone7ag0583 | 700 | ProSiteProfiles | GP-PDE domain profile. | 294 | 594 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 1 | 694 | - | GO:0008889(PANTHER) | |
| Cone7ag0583 | 700 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 293 | 595 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 9 | 277 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | MobiDBLite | consensus disorder prediction | 629 | 644 | - | - | |
| Cone7ag0583 | 700 | MobiDBLite | consensus disorder prediction | 657 | 674 | - | - | |
| Cone7ag0583 | 700 | SUPERFAMILY | PLC-like phosphodiesterases | 14 | 276 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 16 | 270 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 301 | 589 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | ProSiteProfiles | GP-PDE domain profile. | 1 | 277 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | MobiDBLite | consensus disorder prediction | 623 | 674 | - | - | |
| Cone7ag0583 | 700 | SUPERFAMILY | PLC-like phosphodiesterases | 294 | 594 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cone7ag0583 | 700 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 292 | 594 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0036 | Cone-Chr6:216015 | Cone7ag0583 | Cone-Chr7:2797196 | 1.19E-190 | dispersed | |
| Cone7ag0583 | Cone-Chr7:2797196 | Cone9ag0039 | Cone-Chr9:167576 | 2.74E-191 | dispersed | |
| Cone4ag0607 | Cone-Chr4:2796663 | Cone7ag0583 | Cone-Chr7:2797196 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0583 | - | - | - | 0.0 |