Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0586 | ATGCTAGCTAGCTTGTCGAAAATTGCTCCGGCACTAATTGCCGGAAACTCTATTGTCCTCAAGCCACCCACTCAGGGAGCTGTTGCTGCTCTTCATATGGTTTATTGCTTCCACTTGGCCGGTTTTCCGAAAGGGCTAATTAGTTGTGTTATGGGAAAAGGTTCCGAGATTGGTGACTTCCTTACCATGCATCCCGGGGTGAATTGCATAAGCTTCACTGGAGGAGACACTGGTATTTCGATCTCAAAGAAGGCTGGCATGGTGTCGCTTCAGATGGAGTTGGGGGGGAAAGATGCTTGCATCATTCTCGAGGATTTCGGTCTGGACTTAGTTGCCGCAAACATCATAAAGGGATGCTTTTCTTACATTAGTCAAAGGTGCACTACAGTTAAGGTCGTCTTGGTGATAGAATCTGTTGCTGATGCCTTGGTTGAGAAAGTGAATGCGAAGGTTGCTAAGTTGACCGTTGGCCCCCCGGAAGTTGACTCAGACATCACTCCGGTTATGACCGAATCGTCTGCAAATTACATAGAAGGGCTTATGATGGATGCAAAGGAAAAAGGAGTAACGTTTTGCCAAGAGTACAAGGGACAGGGAGATCTTATTAGGCCCTTGTTGCTTGACATGGTCCGGCCCGATATGAGGATCACTTGGGAGGAACCCTTTGGGCAGGTTTTACCGGTTATTAGGATTAATTCAGTTGAAGAAGGTATCCACCATTGCAATGTTAGCAATTTTGGACTCCAGGGATGTGTATTCACAAAAGACATAAACAAAGGTATATTGATCGGTGATTCAATGGAGACCGGAACAGTTCAAATAAACTCGGCACCAGCTAGATGCCCGGATCACTTTCCATTTCAGGGTATCAAGGACAGTGGAATTGAATCACAAGGAGCTACTAACAACATCAACATGATGACTAAGGTGAAGTACACAATGGGTTAG | 948 | 45.57 | MLASLSKIAPALIAGNSIVLKPPTQGAVAALHMVYCFHLAGFPKGLISCVMGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMVSLQMELGGKDACIILEDFGLDLVAANIIKGCFSYISQRCTTVKVVLVIESVADALVEKVNAKVAKLTVGPPEVDSDITPVMTESSANYIEGLMMDAKEKGVTFCQEYKGQGDLIRPLLLDMVRPDMRITWEEPFGQVLPVIRINSVEEGIHHCNVSNFGLQGCVFTKDINKGILIGDSMETGTVQINSAPARCPDHFPFQGIKDSGIESQGATNNINMMTKVKYTMG | 315 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2816363 | 2817715 | + | Conep07aG0060000.1 | Cone7ag0586 | 441182 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0586 | 315 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 92 | 99 | IPR029510 | GO:0016491(InterPro) | |
| Cone7ag0586 | 315 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 98 | 284 | IPR016163 | GO:0016620(InterPro) | |
| Cone7ag0586 | 315 | FunFam | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | 96 | 286 | - | - | |
| Cone7ag0586 | 315 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 4 | 312 | IPR016162 | GO:0016491(InterPro) | |
| Cone7ag0586 | 315 | SUPERFAMILY | ALDH-like | 4 | 313 | IPR016161 | GO:0016491(InterPro) | |
| Cone7ag0586 | 315 | Pfam | Aldehyde dehydrogenase family | 2 | 312 | IPR015590 | GO:0016491(InterPro) | |
| Cone7ag0586 | 315 | PANTHER | ALDEHYDE DEHYDROGENASE | 5 | 313 | IPR051020 | GO:0008911(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0988 | Cone-Chr17:7626324 | Cone7ag0586 | Cone-Chr7:2816363 | 6.76E-187 | wgd | |
| Cone4ag0605 | Cone-Chr4:2773319 | Cone7ag0586 | Cone-Chr7:2816363 | 6.53E-196 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0586 | K00131 | - | gmx:100780041 | 540.036 |