Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0605 ATGACCGCGGCGATTTTACCAGATCTAGGAGCCGAGATACTGATTCCGGTATGTGCCATTATCGGAATCATGTTCTCGCTCGTCCAGTGGTACCTCGTCTCACAAGTCAAGCTCTCTCCGACGCGAGACTCTTCGGCTAACAACTCTGCCTCTAAGAATGGCTTCTCCGATTCCCTCATTGAAGAAGAAGAAGGTATCAACGACCACAGCGTCGTCGCCAAGTGCGCTGAGATTCAAAACGCCATATCTGAAGGAGCTACCTCCTTCCTCTTTACTGAGTACAAGTATGTTGGTATCTTCATGGTTGCTTTTGCGGTATTAATTTTCCTTTTCCTCGGCTCTGTGGAGGGATTCAGCACTAGCGGTCAGCCATGCACATACGACCAAACAAAGACATGTAAGCCAGCTTTGGCAACTGCCATTTTCAGCACCATATCCTTTTTGCTTGGTGGTATCACTTCTCTGATCTCCGGCTTCCTTGGAATGAAAATTGCCACTTATGCAAATGCAAGAACTACTTTGGAGGCAAGAAAGGGAGTTGGGAAGGCTTTCATCACTGCATTCAGATCTGGCGCTGTTATGGGCTTCCTCCTAGCTGCAAATGGTCTTTTGGTTCTTTTTATTGCTATCAACCTCTTTAAAATTTACTATGGCGATGATTGGGGTGGTCTTTTTGAGGCTATCACTGGATATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGAAGAGTTGGTGGTGGTATCTACACTAAAGCTGCAGATGTTGGGGCTGATCTTGTTGGCAAAGTCGAAAGGAATATTCCTGAGGATGATCCTAGAAATCCAGCTGTGATTGCTGATAATGTTGGAGACAATGTTGGGGATATAGCTGGTATGGGATCTGATCTTTTTGGGTCATATGCCGAGTCTTCCTGTGCTGCCCTTGTTGTTGCTTCCATATCCTCTTTCGGAATTAATCATGATTTGACTGCAATGCTATATCCTCTTCTCATCAGTTCTGTGGGTATCATTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAAATCAAGGCTGTCAAGGAGATTGAACCAGCACTAAAGAAGCAGCTCGTCATTTCCACCGTTCTGATGACTGTCGGAATTGCAATTGTCACATGGATTTCTGTTCCATCCTCATTTACTATCTTCAATTTTGGAGTTCAGAAGGATGTGCAGAACTGGCAACTGTTCTTATGTGTTGCTGTTGGTCTCTGGGCTGGCCTTATCATTGGATTTGTAACTGAGTATTACACTAGCAATGCATACAGCCCTGTGCAAGACGTTGCTGATTCTTGTCGGACTGGTGCGGCTACAAATGTCATTTTTGGCCTTGCTTTGGGATACAAATCTGTCATCATTCCAATCTTTGCAATTGCCATCAGCATTTTTGTTAGTTTCAGCTTTGCTGCTATGTATGGTATTGCGGTAGCTGCCCTTGGGATGCTTAGTACAATTGCCACAGGTTTGGCCATTGACGCATATGGCCCCATTAGTGATAATGCCGGAGGCATTGCTGAGATGGCAGGCATGAGCCACAGAATCCGAGAGAGAACTGATGCTCTTGATGCTGCTGGAAACACCACAGCTGCCATCGGAAAGGGTTTTGCAATCGGTTCTGCTGCTCTTGTATCTCTAGCACTCTTTGGTGCTTTTGTGAGCCGTGCAGCAATCTCAACAGTTGACGTCTTGACTCCTAAAGTCTTTATCGGTCTACTTGTGGGTGCTATGCTTCCATACTGGTTCTCTGCCATGACCATGAAAAGTGTTGGAAGTGCAGCCCTAAAGATGGTTGAGGAAGTGAGAAGGCAATTCAACACCATTCCCGGTCTCTTGGAGGGTACCACCAAGCCTGATTATGCCACCTGTGTCAAGATCTCGACTGATGCTTCTATCAAAGAGATGATCCCACCTGGTGCCCTTGTCATGATGACCCCACTTATTGTCGGAATCTTCTTCGGCGTAGAAACTCTTTCTGGTGTCCTTGCTGGATCCCTTGTCTCAGGCGTACAGATTGCTATCTCTGCATCCAACACAGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCAAGAACCCTAGGTCCAAAGGGGTCAGATCCGCACAAGGCAGCTGTTATAGGCGATACAATCGGAGATCCCCTCAAGGATACTTCTGGACCCTCTCTCAACATCCTTATCAAGCTAATGGCTGTTGAATCGCTTGTTTTTGCACCGTTCTTTGCTACCCATGGTGGCCTTCTCTTTAAGATCTCATTTTAA 2307 46.21 MTAAILPDLGAEILIPVCAIIGIMFSLVQWYLVSQVKLSPTRDSSANNSASKNGFSDSLIEEEEGINDHSVVAKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAVLIFLFLGSVEGFSTSGQPCTYDQTKTCKPALATAIFSTISFLLGGITSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDLTAMLYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPALKKQLVISTVLMTVGIAIVTWISVPSSFTIFNFGVQKDVQNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGTTKPDYATCVKISTDASIKEMIPPGALVMMTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKISF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2923857 2928538 - Conep07aG0062000.1 Cone7ag0605 441201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0605 768 PIRSF H+-PPtase 11 765 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone7ag0605 768 NCBIfam V-type H(+)-translocating pyrophosphatase 11 762 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone7ag0605 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone7ag0605 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 765 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone7ag0605 768 Pfam Inorganic H+ pyrophosphatase 55 752 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0838 Cone-Chr3:4287110 Cone7ag0605 Cone-Chr7:2923857 0 dispersed
Cone4ag0871 Cone-Chr4:6057661 Cone7ag0605 Cone-Chr7:2923857 4.41E-147 dispersed
Cone17ag0241 Cone-Chr17:1138676 Cone7ag0605 Cone-Chr7:2923857 0 wgd
Cone20ag1170 Cone-Chr20:7893649 Cone7ag0605 Cone-Chr7:2923857 0 wgd
Cone4ag0644 Cone-Chr4:3027210 Cone7ag0605 Cone-Chr7:2923857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0605 K23025 - gmx:100775864 1384.78