Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0630 ATGAAGAGGCACACTAGAAAGATTGGAAAGTATGAGGTTGGGCGTACGATTGGGGAAGGAACATTTGCCAAGGTTAAGTTTGCGCAAAACACAGAGACAGGGGAGAGCGTGGCCATGAAAGTTTTGGCCAAAAGCACCATTCTCAAGCACAGAATGGTTGATCAGATTAAGAGAGAGATATCCATAATGAAGATTATCAGGCATCCAAACATAGTTAGATTGTATGAGGTATTGGCCAGCCGGACAAAGATATATATAATACTTGAGTTTGTTACTGGAGGAGAGCTATATGATAAGATTGTTCACCAGGGAAAGCTCCGTGAAGCAGAGGCTCGAAAATACTTCCAACACCTTGTAGATGCAGTTGCCCATTGTCATAGTAGGGGTGTGTACCACAGAGACCTTAAGCCTGAAAACCTTCTTCTTGATGCCTTTGGAAATCTCAAGGTTTCTGACTTTGGACTTAGCGCACTGCCAAAAAAAGGAGTTGGGCTTCTTCACACAACATGTGGGACTCCAAATTATGTTGCTCCTGAGGTGCTTCTTGGTGGGGGTTATGATGGTGCAGCCGCTGACCTATGGTCATGTGGAGTCATTCTCTATGTTCTAATGGCTGGGTATCTGCCATTTTCAGAGATAGATCTTCCCACCCTATACAAAAAAATAAATGCTTCAGAGTTTTCTTGTCCCCCTTGGTTCGCTCCTGGGGCAAAGTCACTAATAAAAAAGATTCTTAATCCCAACCCTAAAACTCGCATTAAAATTCAAGAAATCAGAAAAGATCCATGGTTTCAGAAAAACTACATTCCTGCCAAACTTAGGGAAAGTGAGGACGCAAGTTTGGATGATGTCCATGCTGTTTTTGAGGACATTGAGGAGCAATATGTGGCTGAGCAGTCAACAGCAGATAAAGAGGGTGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCTCTAGGATTGAATCTATCAGCACTATTTGATAGGCGTCAAGACTATATAAAGAGGCAAACACGCTTCTTTTCCCGCGAATCACCCCATGTTATAATGTCAACAATTGAAGCCATAGCAGAGTCAATGAGTCTAAAGGTCCATACACGCCAATACAAGACGAGACTGGAAGGAACCTCCACAGACAAGGGTGGACAATTGGCAGTTGTTCTAGAGGTATATGAAGTTGCACCATCTCTTTTCATGGTCGATTGTCGTAAGGCTGCTGGAGAAACTCTTGAATATCACAAGTTTTACAAGAGCCTATGTGTGAAGCTAGAAGGTATCATATGGAAACCAAAGGAAGGTATGGCGGATTCTGGTCTATTTAGAACCATGACTTGCTGA 1344 42.56 MKRHTRKIGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLAKSTILKHRMVDQIKREISIMKIIRHPNIVRLYEVLASRTKIYIILEFVTGGELYDKIVHQGKLREAEARKYFQHLVDAVAHCHSRGVYHRDLKPENLLLDAFGNLKVSDFGLSALPKKGVGLLHTTCGTPNYVAPEVLLGGGYDGAAADLWSCGVILYVLMAGYLPFSEIDLPTLYKKINASEFSCPPWFAPGAKSLIKKILNPNPKTRIKIQEIRKDPWFQKNYIPAKLRESEDASLDDVHAVFEDIEEQYVAEQSTADKEGGPLIMNAFEMITLSLGLNLSALFDRRQDYIKRQTRFFSRESPHVIMSTIEAIAESMSLKVHTRQYKTRLEGTSTDKGGQLAVVLEVYEVAPSLFMVDCRKAAGETLEYHKFYKSLCVKLEGIIWKPKEGMADSGLFRTMTC 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3198882 3204300 + Conep07aG0065200.1 Cone7ag0630 441226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0630 447 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524(InterPro)
Cone7ag0630 447 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0630 447 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Cone7ag0630 447 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165(InterPro)
Cone7ag0630 447 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Cone7ag0630 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0630 447 Gene3D Kinase associated domain 1, KA1 305 431 - -
Cone7ag0630 447 FunFam Non-specific serine/threonine protein kinase 305 431 - -
Cone7ag0630 447 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0630 447 FunFam Non-specific serine/threonine protein kinase 4 305 - -
Cone7ag0630 447 Pfam NAF domain 308 367 IPR004041 GO:0007165(InterPro)
Cone7ag0630 447 SUPERFAMILY Protein kinase-like (PK-like) 8 294 IPR011009 -
Cone7ag0630 447 SMART serkin_6 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0630 447 CDD CIPK_C 312 427 - -
Cone7ag0630 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 419 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone7ag0630 447 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1568 Cone-Chr5:10936351 Cone7ag0630 Cone-Chr7:3198882 5.51E-172 dispersed
Cone6ag1118 Cone-Chr6:7140717 Cone7ag0630 Cone-Chr7:3198882 5.74E-180 dispersed
Cone7ag0496 Cone-Chr7:2280931 Cone7ag0630 Cone-Chr7:3198882 1.69E-81 dispersed
Cone7ag0630 Cone-Chr7:3198882 Cone9ag0959 Cone-Chr9:4798124 6.11E-116 dispersed
Cone4ag0668 Cone-Chr4:3296691 Cone7ag0630 Cone-Chr7:3198882 4.35E-298 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83019 PF01053 Cys_Met_Meta_PP 1.20E-129 CL0061 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0630 - - - 0.0