Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0630 | ATGAAGAGGCACACTAGAAAGATTGGAAAGTATGAGGTTGGGCGTACGATTGGGGAAGGAACATTTGCCAAGGTTAAGTTTGCGCAAAACACAGAGACAGGGGAGAGCGTGGCCATGAAAGTTTTGGCCAAAAGCACCATTCTCAAGCACAGAATGGTTGATCAGATTAAGAGAGAGATATCCATAATGAAGATTATCAGGCATCCAAACATAGTTAGATTGTATGAGGTATTGGCCAGCCGGACAAAGATATATATAATACTTGAGTTTGTTACTGGAGGAGAGCTATATGATAAGATTGTTCACCAGGGAAAGCTCCGTGAAGCAGAGGCTCGAAAATACTTCCAACACCTTGTAGATGCAGTTGCCCATTGTCATAGTAGGGGTGTGTACCACAGAGACCTTAAGCCTGAAAACCTTCTTCTTGATGCCTTTGGAAATCTCAAGGTTTCTGACTTTGGACTTAGCGCACTGCCAAAAAAAGGAGTTGGGCTTCTTCACACAACATGTGGGACTCCAAATTATGTTGCTCCTGAGGTGCTTCTTGGTGGGGGTTATGATGGTGCAGCCGCTGACCTATGGTCATGTGGAGTCATTCTCTATGTTCTAATGGCTGGGTATCTGCCATTTTCAGAGATAGATCTTCCCACCCTATACAAAAAAATAAATGCTTCAGAGTTTTCTTGTCCCCCTTGGTTCGCTCCTGGGGCAAAGTCACTAATAAAAAAGATTCTTAATCCCAACCCTAAAACTCGCATTAAAATTCAAGAAATCAGAAAAGATCCATGGTTTCAGAAAAACTACATTCCTGCCAAACTTAGGGAAAGTGAGGACGCAAGTTTGGATGATGTCCATGCTGTTTTTGAGGACATTGAGGAGCAATATGTGGCTGAGCAGTCAACAGCAGATAAAGAGGGTGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCTCTAGGATTGAATCTATCAGCACTATTTGATAGGCGTCAAGACTATATAAAGAGGCAAACACGCTTCTTTTCCCGCGAATCACCCCATGTTATAATGTCAACAATTGAAGCCATAGCAGAGTCAATGAGTCTAAAGGTCCATACACGCCAATACAAGACGAGACTGGAAGGAACCTCCACAGACAAGGGTGGACAATTGGCAGTTGTTCTAGAGGTATATGAAGTTGCACCATCTCTTTTCATGGTCGATTGTCGTAAGGCTGCTGGAGAAACTCTTGAATATCACAAGTTTTACAAGAGCCTATGTGTGAAGCTAGAAGGTATCATATGGAAACCAAAGGAAGGTATGGCGGATTCTGGTCTATTTAGAACCATGACTTGCTGA | 1344 | 42.56 | MKRHTRKIGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLAKSTILKHRMVDQIKREISIMKIIRHPNIVRLYEVLASRTKIYIILEFVTGGELYDKIVHQGKLREAEARKYFQHLVDAVAHCHSRGVYHRDLKPENLLLDAFGNLKVSDFGLSALPKKGVGLLHTTCGTPNYVAPEVLLGGGYDGAAADLWSCGVILYVLMAGYLPFSEIDLPTLYKKINASEFSCPPWFAPGAKSLIKKILNPNPKTRIKIQEIRKDPWFQKNYIPAKLRESEDASLDDVHAVFEDIEEQYVAEQSTADKEGGPLIMNAFEMITLSLGLNLSALFDRRQDYIKRQTRFFSRESPHVIMSTIEAIAESMSLKVHTRQYKTRLEGTSTDKGGQLAVVLEVYEVAPSLFMVDCRKAAGETLEYHKFYKSLCVKLEGIIWKPKEGMADSGLFRTMTC | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3198882 | 3204300 | + | Conep07aG0065200.1 | Cone7ag0630 | 441226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0630 | 447 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 49 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0630 | 447 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0630 | 447 | FunFam | Non-specific serine/threonine protein kinase | 2 | 90 | - | - | |
Cone7ag0630 | 447 | ProSiteProfiles | NAF domain profile. | 306 | 330 | IPR018451 | GO:0007165(InterPro) | |
Cone7ag0630 | 447 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 272 | - | - | |
Cone7ag0630 | 447 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0630 | 447 | Gene3D | Kinase associated domain 1, KA1 | 305 | 431 | - | - | |
Cone7ag0630 | 447 | FunFam | Non-specific serine/threonine protein kinase | 305 | 431 | - | - | |
Cone7ag0630 | 447 | ProSiteProfiles | Protein kinase domain profile. | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0630 | 447 | FunFam | Non-specific serine/threonine protein kinase | 4 | 305 | - | - | |
Cone7ag0630 | 447 | Pfam | NAF domain | 308 | 367 | IPR004041 | GO:0007165(InterPro) | |
Cone7ag0630 | 447 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 294 | IPR011009 | - | |
Cone7ag0630 | 447 | SMART | serkin_6 | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0630 | 447 | CDD | CIPK_C | 312 | 427 | - | - | |
Cone7ag0630 | 447 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 4 | 419 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone7ag0630 | 447 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 90 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag1568 | Cone-Chr5:10936351 | Cone7ag0630 | Cone-Chr7:3198882 | 5.51E-172 | dispersed | |
Cone6ag1118 | Cone-Chr6:7140717 | Cone7ag0630 | Cone-Chr7:3198882 | 5.74E-180 | dispersed | |
Cone7ag0496 | Cone-Chr7:2280931 | Cone7ag0630 | Cone-Chr7:3198882 | 1.69E-81 | dispersed | |
Cone7ag0630 | Cone-Chr7:3198882 | Cone9ag0959 | Cone-Chr9:4798124 | 6.11E-116 | dispersed | |
Cone4ag0668 | Cone-Chr4:3296691 | Cone7ag0630 | Cone-Chr7:3198882 | 4.35E-298 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83019 | PF01053 | Cys_Met_Meta_PP | 1.20E-129 | CL0061 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0630 | - | - | - | 0.0 |