Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0634 ATGGGGGGAGAAAGAGAAAAGGCAAGAACAGTTTTGCTTCATGGAAAACTGCACGTGAAGATCCTTGAGATCGATAGGGCTTCATCATCAGGAAGTTGCTGCAATTTCTTCTGCAAGATAACTAAGAACATAGATTATAGTGATAGAATTAAAAGAAAGTGTACTTTAAAAGTTTATATAACAATCGATATCGGAAATGCAAGAGTGGGCCGGACCAGGCTGCAAGCACAAGAACATGGAAATCATCAATGGAATGAGTCGCTTCACATTTACACTGCTCATAATGCTTCACATGTTACCTTCTCAATCAAAGAAAGCCAACCTGTCGGGGCAAAAGTGATCGGCCAAGCTCATATCCCTGCAGAAGAGCTACTAGAAGGACTAGAAATCGACAAATGGCTCACAATCATCGGCTCCAATCATAAATCTCAATATGCCGGCTCTAGACTCCACGTGCAATTACAATATTTCAACGCCACTCGAGATCCTAATTGGTCGAAAGGGATTGAGACTAGTGACTTTCCTGGAGTTCCTTACACATATTTTAAGCAAAGAAATGGTTGTAGGGTGACACTTTATCAAGATGCTCATACCCCTAATGAGTTCTTCCCGAAAATTTCACTTTCTGAGGGGAAATATTACAGCCCTAAGCGGTGTTGGGAAGATGTATTTGATGCCATTTCTAATGCCAAGCACTTGATTTACATAACGGGATGGTCTATATATGCTAAAATAACTTTACTACGAGACCCACAGAGGGAAAGGTTCGGCAAAGGAATGACTTGTTTGACCCTCGGAGAGTTGCTTATAAAGAAGGCGAATGAAGGAGTTACGGTCTTGATGCTTGTTTGGGACGATCGGACTTCATTGAAGTTACTCAAACTGGATGGAGTAATGGCTACTCATGACGAAGATACTGAAACCTATTTCCATAAAACAGCGGTCCATTGTGTTTTATGCCCAAGATATCCAGATAATAGGGGGAGCATAGTTCAAGACTTAAAGGTCTCCACCATTTTCACTCATCATCAAAAGATTGTGATAGTTGACGGTGAAATTTCAGATGAATTATCTGCTAAGAGGAGGATCGTGAGCTTTATTGGAGGGATTGATCTTTGTGATGGGAGATATGACACTCCATTTCATTCCATATTCGGTACACTAGACACAGCTCATAACAAAGATTTTCATCAACCCAATTTCTTAAATGCTTCAATTAAAAAAGGCGGACCAAGAGAGCCTTGGCATGATGTTCATTCCAAATTAGAAGGGCCGGTTGCTTGGGACGTTTTGGTCAATTTCGAGGAGAGATGGAGAAAGCAAGGCGGGAAGGGTGATTTGCTTATTCGGTTAACCGAAAATGAACATATATTCATAGCTCCATCTCAAGATACGTTACTTGAAGATCAAGAAAAATGGAATGTGCAATTATTTAGATCGATCGACGGTGGAGCTGCATATGGATTTCCAGATGATCCTAAAGATGCTTCAAGGAAAGGTCTTGTCAGCTGGAAGGATAACATTATAGATCGAAGCATTCAAGACGGTTATATCAATGCTATAAGAAGAGCAAAAAACTTCATTTACATTGAGAATCAGTATTTTCTTGGAAGCTCTTACGGGTGGATTACTTCGGATAAAGACAACTTTAAAGTGGAGGAAAAAATTGGTGCGGTGCAACTTATCCCGAAGGAATTGTCGTTGAAGATTGTTAGTAAGATAGAAGCGGGAGAGAGATTTATGGTCTATGTAGTCATTCCGATGTGGCCGGAAGGTGTTCCCGAGAGTCATTCGGTTCAAGCGATACTAAATTGGCAAAGGAAGACAATGGAGATGATGTATAGTGATATAGCTAAAGCCATTGAATTGAAGGGAATCAAAGCAGACCCTAATGACTATTTGTCATTTTTCTGTCTCGGCAATAAGGAAACAAAGAAGAGCGTTGAATACCAACCGCCCGAAAAACCCGAACGTCATACTGATTACAGTAGAGCTCAGCAGGCACGACGGTTCATGATCTATGTTCATGCCAAGATGATGATTGTTGATGATGAATATATAATCATCGGATCGGCTAATATTAATCAAAGGTCAATGGATGGTGCTCGGGACACTGAGATTGCGATGGGGGCCCACCAGCCACATCACCTAGCGATCAATATAGAGAACCCGGCTCGGGGTCAAATACACGGATTTAGAATAGCACTGTGGTATGAGCACATGGGATCGATTGACGAGGTTTTTCTCCAACCGGAAAGTTTGAATTGTGTTAGGAAAGTGAATCAAATTGCCAAGAGTTATTGGGACCTCTATTGTTCGGAGGAGACCTTGGATCGAGATCTTCCGGGCCATTTGCTTAGTTATCCCATTAGTGTAGCTGAAAATGGAGAGGTCAGAGATTTGCCCGGAACCCACTTCTTCCCGGATACTAAAGGTCTAGTTCGTGGGGCTAACACTGAGCTGCTTCCACCGATTCTCACTACTTAA 2487 41.74 MGGEREKARTVLLHGKLHVKILEIDRASSSGSCCNFFCKITKNIDYSDRIKRKCTLKVYITIDIGNARVGRTRLQAQEHGNHQWNESLHIYTAHNASHVTFSIKESQPVGAKVIGQAHIPAEELLEGLEIDKWLTIIGSNHKSQYAGSRLHVQLQYFNATRDPNWSKGIETSDFPGVPYTYFKQRNGCRVTLYQDAHTPNEFFPKISLSEGKYYSPKRCWEDVFDAISNAKHLIYITGWSIYAKITLLRDPQRERFGKGMTCLTLGELLIKKANEGVTVLMLVWDDRTSLKLLKLDGVMATHDEDTETYFHKTAVHCVLCPRYPDNRGSIVQDLKVSTIFTHHQKIVIVDGEISDELSAKRRIVSFIGGIDLCDGRYDTPFHSIFGTLDTAHNKDFHQPNFLNASIKKGGPREPWHDVHSKLEGPVAWDVLVNFEERWRKQGGKGDLLIRLTENEHIFIAPSQDTLLEDQEKWNVQLFRSIDGGAAYGFPDDPKDASRKGLVSWKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSYGWITSDKDNFKVEEKIGAVQLIPKELSLKIVSKIEAGERFMVYVVIPMWPEGVPESHSVQAILNWQRKTMEMMYSDIAKAIELKGIKADPNDYLSFFCLGNKETKKSVEYQPPEKPERHTDYSRAQQARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAHQPHHLAINIENPARGQIHGFRIALWYEHMGSIDEVFLQPESLNCVRKVNQIAKSYWDLYCSEETLDRDLPGHLLSYPISVAENGEVRDLPGTHFFPDTKGLVRGANTELLPPILTT 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3222065 3225007 - Conep07aG0065600.1 Cone7ag0634 441230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0634 828 Pfam Phospholipase D C terminal 745 817 IPR024632 -
Cone7ag0634 828 Pfam C2 domain 52 135 IPR000008 -
Cone7ag0634 828 Gene3D Endonuclease Chain A 207 459 - -
Cone7ag0634 828 PIRSF PLD_plant 2 828 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cone7ag0634 828 Gene3D Endonuclease Chain A 495 720 - -
Cone7ag0634 828 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Cone7ag0634 828 PANTHER PHOSPHOLIPASE D 12 812 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cone7ag0634 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 376 IPR001736 GO:0003824(InterPro)
Cone7ag0634 828 Gene3D C2 domain 14 169 IPR035892 -
Cone7ag0634 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 158 IPR035892 -
Cone7ag0634 828 FunFam Phospholipase D delta 210 456 - -
Cone7ag0634 828 SMART pld_4 671 698 IPR001736 GO:0003824(InterPro)
Cone7ag0634 828 SMART pld_4 338 376 IPR001736 GO:0003824(InterPro)
Cone7ag0634 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 671 698 IPR001736 GO:0003824(InterPro)
Cone7ag0634 828 SUPERFAMILY Phospholipase D/nuclease 511 755 - -
Cone7ag0634 828 SUPERFAMILY Phospholipase D/nuclease 160 444 - -
Cone7ag0634 828 SMART C2_3c 16 133 IPR000008 -
Cone7ag0634 828 Pfam Phospholipase D Active site motif 340 376 IPR001736 GO:0003824(InterPro)
Cone7ag0634 828 Pfam Phospholipase D Active site motif 673 698 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0929 Cone-Chr4:7710515 Cone7ag0634 Cone-Chr7:3222065 1.15E-198 dispersed
Cone7ag0634 Cone-Chr7:3222065 Cone9ag1632 Cone-Chr9:11614724 7.64E-225 dispersed
Cone16ag0649 Cone-Chr16:7999422 Cone7ag0634 Cone-Chr7:3222065 0 wgd
Cone17ag1023 Cone-Chr17:7795482 Cone7ag0634 Cone-Chr7:3222065 0 wgd
Cone2ag0364 Cone-Chr2:1923354 Cone7ag0634 Cone-Chr7:3222065 0 wgd
Cone20ag1192 Cone-Chr20:7989422 Cone7ag0634 Cone-Chr7:3222065 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0634 K01115 - vvi:100232987 1124.77