Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0655 | ATGAATCAGACGAAAGTTGATTTCACCCGCGTAGCCAGAACGAACATGCCGCTTGAAAAACAGAATGCCTGGAACTCTATGAATAAAGTGAAGGTTTTTCGTGCGTCAACAATGGCGGGATTGATCAGAACCAGAGCAATGTTTAAGATTTCAGTGTGCGGTCAGGAGGAGATAGAGCAGGTATCGAGAGATGGAAGTCAATACAGCCTTTCTACCGGGGTTTTGCCCTCTCTCGGCGCCAGAAGCAATCGCCGAGTCAAGCTCCGGCGATTCATTATCTCGCCCTACGACCGTCGTTACAGGGCATGGGAAACATTTTTGATAATTTTGGTGGCCTATACTGCCTGGGTCTCGCCATTTGAGTTCGGATTTCTTCGAAAACCAGAGGGACCACTTGCCACTACAGACAATGTAGTTAATGGCTTCTTTGCCGTAGATATTATACTTACCTTCTTCATAGCCTATTTGGACAAAGCCACCTATCTCTTAATTGATGAACCAAAACAGATTGCTTGGAAGTATCTAAGGACTTGGTTTGTCTTTGACTTCATATCAACTATTCCTTCTGAACTTGCTCAAAAAATCTCTCCCTCTCCTTTAAGATCCTATGGATTATTCAACATGCTTCGCCTTTGGCGTCTCAGAAGAGTCAGTGCAATGTTTTCTAGATTGGAGAAAGATAAGAACTTCAACTATTTTTGGGTCCGATGTGCAAAACTCATTTGTGTTACCCTTTTTGCTGTTCACTGTGCGGCATGCTTCTATTATCTTATTGCTGCTCGTTATCGGGACCCACAAAGGACATGGATTGGATCAACCATGGCTGACTTTCTTGAACAGAGCTTGTGGATTAGATATGTGACTTCCATCTATTGGTCTATTACTACTCTATCAACTGTTGGGTATGGTGATTTGCATCCAGTAAATACAAGAGAGATGATCTTTGATATCTTCTATATGCTCTTTAACCTTGGCTTGACTGCATATTTGATTGGAAACATGACCAACTTGGTTGTTCATGGCACCAGCCGAACTAGAAAATTCAGGGATACTATACAAGCTGCCTCGAGTTTTGGTCAGAGGAATCAACTTCCTCATAGATTGCAAGATCAAATGCTTGCCCATCTGTGTTTAAAGTACAGAACCGATTCTGAAGGATTGCAGCAGCAAGAAACTCTTGATTCCCTTCCGAAAGCAATCCGGTCTAGCATTTCGCATTATCTTTTCTACGACCTTATGGATAAGGTTTACTTGTTTCAAGGTGTATCAAATGACTTGCTTTTTCAATTGGTCTCAGAGATGAAAGCTGAGTACTTTCCCCCAAAAGAGGATGTGATCTTGCAGAATGAAGCACCCACCGACTTCTACATTCTTGTCACGGGTGCTGTGGATCTAGTGGTTCTAAAAAATGGAGTTGAACAGGTTGTTGGAACGGCGAAAAAAGGTGATCTTTGTGGGGAGATTGGGGTTCTCTGTTACAAGCCACAACTATTTACAGTGCGCACCAAGCGTCTGAGCCAGCTACTCCGTTTGAACCGTACCACTTTTTTGAATATCGTTCAGGCCAATGTTGGAGATGGAACCATAATTATGAATAATCTACTTCAGCATTTGAAAGACTTGAAAGACCCAATAATGGAGGGAGTTTTGTTGGAGACTGAGAACATGTTGGCTCGTGGAAGGATGGACTTACCTCTCAGTCTATGCTTTGCAGCAGCTCGTGGAGATGATTTATTGTTGCATCAGCTTTTAAGGCGAGGCCTTGATCCAAATGAATCAGATAATATGGGAAGAACAGCTCTGCATATAGCTGCCTCGAAAGGAAGTGAGAATGACGTGCTTCTTTTACTCGATAATGGAGCTGAACCAAACAGCAGAGATTCAGAAGGGAATGTGCCCTTATGGGAAGCAATGCTAGGTGGACATGAACCAATAATCAAGTTTCTATTAGACAATGGAGCAAATCTTCGGAAAGGTGATGTGGGCCAATACTCATGCACAGCTGCAGAACAAAACAACCTTAACTTGGTCAAACAAATTCTTCGGTTCGGAGGAGACATCACTTCTCCCAAAAGCAGTAATGGAGTCACGGCTCTCCACGTGGCGGTTTGCGAAGAGAATATTGAGATAGTCAAGTTCCTATTGGACCAAGGTGCTGACATGGACAAACCAGACATGGATGGGTGGACCCCACGAGATCTGGCTGACCAACAGGGACACGAAGAAATAAAAGCCCTCTTCATGTCAAGAAAAGAGCTAAAGCCTCAATCAGGTATTGCAACTCCTCCTAGGAAGAGCGAGGTTAGGTTCCTTGGAAGATTTACAAGCGAGCCAAATATAAGACCTCCGGCCCAAGAGGGGTCCATTAATAACACAGATGTGTCATGGGGTCGGTCCAGACCTAGGCGTAGGACTAATAATTACAATAATTCTTTGATTGGAATAATGTCTGCTGCTCATTCTGGGGAGAAAGACGTGTTGTCTTATGTTAATGAGACTCCTAATGAGAGGACTAACCGAGATAATGGTGTGAGAGTGACGGTCAGCTGCCCGCAGAGCGGTCAGGCGGGCAGTAAGCTTGTGCTTCTGCCCGGGAGTTTTAAGGAGTTGCTTGAGACTGGGGCTAAGAAGTTTGGGGTGATGCCGATAAAAGTTGTAAGTAAAGATGGAGTTGAAATTGAAGATACAGATGTTATTAGAGATGGAGATCACTTGACTTTTATTTGCGGTGTAGTGCAAGATACTAGTAGCCAACACTGTCAAACTAATGGCGTTTTGTAA | 2781 | 43.62 | MNQTKVDFTRVARTNMPLEKQNAWNSMNKVKVFRASTMAGLIRTRAMFKISVCGQEEIEQVSRDGSQYSLSTGVLPSLGARSNRRVKLRRFIISPYDRRYRAWETFLIILVAYTAWVSPFEFGFLRKPEGPLATTDNVVNGFFAVDIILTFFIAYLDKATYLLIDEPKQIAWKYLRTWFVFDFISTIPSELAQKISPSPLRSYGLFNMLRLWRLRRVSAMFSRLEKDKNFNYFWVRCAKLICVTLFAVHCAACFYYLIAARYRDPQRTWIGSTMADFLEQSLWIRYVTSIYWSITTLSTVGYGDLHPVNTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFGQRNQLPHRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFYDLMDKVYLFQGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKNGVEQVVGTAKKGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLARGRMDLPLSLCFAAARGDDLLLHQLLRRGLDPNESDNMGRTALHIAASKGSENDVLLLLDNGAEPNSRDSEGNVPLWEAMLGGHEPIIKFLLDNGANLRKGDVGQYSCTAAEQNNLNLVKQILRFGGDITSPKSSNGVTALHVAVCEENIEIVKFLLDQGADMDKPDMDGWTPRDLADQQGHEEIKALFMSRKELKPQSGIATPPRKSEVRFLGRFTSEPNIRPPAQEGSINNTDVSWGRSRPRRRTNNYNNSLIGIMSAAHSGEKDVLSYVNETPNERTNRDNGVRVTVSCPQSGQAGSKLVLLPGSFKELLETGAKKFGVMPIKVVSKDGVEIEDTDVIRDGDHLTFICGVVQDTSSQHCQTNGVL | 926 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3406157 | 3410910 | + | Conep07aG0067800.1 | Cone7ag0655 | 441251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0655 | 926 | Gene3D | Jelly Rolls | 382 | 542 | IPR014710 | - | |
| Cone7ag0655 | 926 | FunFam | Potassium channel KAT2 | 406 | 542 | - | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 418 | 520 | IPR000595 | - | |
| Cone7ag0655 | 926 | CDD | CAP_ED | 418 | 523 | IPR000595 | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat region circular profile. | 629 | 656 | - | - | |
| Cone7ag0655 | 926 | Gene3D | - | 564 | 749 | IPR036770 | - | |
| Cone7ag0655 | 926 | SMART | ANK_2a | 629 | 658 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SMART | ANK_2a | 596 | 625 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SMART | ANK_2a | 563 | 592 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SMART | ANK_2a | 664 | 689 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SMART | ANK_2a | 694 | 723 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SUPERFAMILY | cAMP-binding domain-like | 343 | 538 | IPR018490 | - | |
| Cone7ag0655 | 926 | Gene3D | - | 103 | 339 | - | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat profile. | 596 | 628 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | Pfam | Ankyrin repeats (3 copies) | 568 | 658 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | Pfam | Ankyrin repeats (3 copies) | 668 | 746 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | Pfam | Ion transport protein | 100 | 345 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone7ag0655 | 926 | FunFam | Potassium channel SKOR | 101 | 339 | - | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat region circular profile. | 596 | 627 | - | - | |
| Cone7ag0655 | 926 | Pfam | KHA, dimerisation domain of potassium ion channel | 845 | 906 | IPR021789 | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat profile. | 629 | 661 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 136 | 146 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 286 | 303 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 113 | 120 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 312 | 323 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 147 | 156 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | EAG/ELK/ERG potassium channel family signature | 330 | 339 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone7ag0655 | 926 | ProSiteProfiles | KHA domain profile. | 845 | 925 | IPR021789 | - | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat profile. | 694 | 726 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | SUPERFAMILY | Voltage-gated potassium channels | 95 | 339 | - | - | |
| Cone7ag0655 | 926 | MobiDBLite | consensus disorder prediction | 781 | 807 | - | - | |
| Cone7ag0655 | 926 | Pfam | Cyclic nucleotide-binding domain | 437 | 523 | IPR000595 | - | |
| Cone7ag0655 | 926 | PANTHER | POTASSIUM CHANNEL AKT1 | 59 | 906 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | Ankyrin repeat signature | 597 | 612 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | PRINTS | Ankyrin repeat signature | 710 | 724 | IPR002110 | GO:0005515(InterPro) | |
| Cone7ag0655 | 926 | ProSiteProfiles | Ankyrin repeat region circular profile. | 694 | 725 | - | - | |
| Cone7ag0655 | 926 | MobiDBLite | consensus disorder prediction | 776 | 807 | - | - | |
| Cone7ag0655 | 926 | SUPERFAMILY | Ankyrin repeat | 568 | 749 | IPR036770 | - | |
| Cone7ag0655 | 926 | SMART | cnmp_10 | 418 | 535 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0257 | Cone-Chr11:1243119 | Cone7ag0655 | Cone-Chr7:3406157 | 1.14E-97 | dispersed | |
| Cone18ag1228 | Cone-Chr18:8724053 | Cone7ag0655 | Cone-Chr7:3406157 | 1.28E-99 | dispersed | |
| Cone5ag1593 | Cone-Chr5:11198970 | Cone7ag0655 | Cone-Chr7:3406157 | 5.05E-170 | dispersed | |
| Cone6ag0891 | Cone-Chr6:4562253 | Cone7ag0655 | Cone-Chr7:3406157 | 7.67E-213 | dispersed | |
| Cone7ag0655 | Cone-Chr7:3406157 | Cone9ag0896 | Cone-Chr9:4384732 | 1.61E-211 | dispersed | |
| Cone4ag0695 | Cone-Chr4:3541652 | Cone7ag0655 | Cone-Chr7:3406157 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0655 | K21867 | - | csv:101220784 | 1404.81 |