Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0656 ATGAAGGGGGAGGTGCAGTTAGAGCCACCAAGCTCGCAAAACCCTTGTGACTCCGATCCTCTGCTAGGGAATCAGGGTGATTTGTCGCCAGCAAGTTCCACTGAGATTCAGAAGGATGAGGATATTGAAACTAGTTCTGTTCCATGCTGTCGTATTTGCCTTGAGAGCGATGTTGATGCAGGTGATGAATTGATATCTCCATGCATGTGCAAAGGTACCCAACAGTTTGTCCATCGATCATGCCTTGATCATTGGCGGTCTATAAAGGAAGGGTTTGCTTTTTCCCATTGCACAACTTGCAAGGCTCAATTTCATCTTCGAGTTGAATTCTTTGAGGAGAATTCTTGGCATACAATAAAGTTCAGAGTATTTGTGGCAAGAGATGTTCTTCTCGTATTTTTTTCTGTACAAACTTTAATATCTGCAATTGGTGGCTTTGCATATCTTGTGGACAAAGATGGTACCTTCAGGAATTCTTTTAGCGATGGATGGGATCGCATTCTATCCAAACATCCTATACCATTCTATTACTGCATAGGGGTTCTTGCATTCTTTGTTCTACTTGGATTTTTCGGGATTATACTACATTGCTCCTCCCTCAATACCAACGATCCAAGACTAGCAGGCTGCCACAACTGTTGTTATGGATGGGGTATTTTGGATTGCTTTCCTGCATCCATGGAGGCTTGCTTTGCATTGGTCATTGTTTTCGTTGTTATATTTGCCATTCTTGGTATAGCTTATGGTTTTCTTGCTGCAACAATGGCCATTCAGAGGATCTGGCAGAGACATTACCACATCCTCACCAAGAGAGAGCTCACTAAGGAGTATATAGTGGAGGATCTTAAGGGTTCTTATACCCCTCCAGAATTGGATTCTGTACATGAGGAACGGCTGAAAGCACTTAGACTTTCGTAG 918 42.81 MKGEVQLEPPSSQNPCDSDPLLGNQGDLSPASSTEIQKDEDIETSSVPCCRICLESDVDAGDELISPCMCKGTQQFVHRSCLDHWRSIKEGFAFSHCTTCKAQFHLRVEFFEENSWHTIKFRVFVARDVLLVFFSVQTLISAIGGFAYLVDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGIILHCSSLNTNDPRLAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLKGSYTPPELDSVHEERLKALRLS 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3420822 3424079 - Conep07aG0067900.1 Cone7ag0656 441252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0656 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 114 IPR013083 -
Cone7ag0656 305 ProSiteProfiles Zinc finger RING-CH-type profile. 42 107 IPR011016 GO:0008270(InterPro)
Cone7ag0656 305 SMART ringv_2 49 101 IPR011016 GO:0008270(InterPro)
Cone7ag0656 305 Pfam RING-variant domain 50 100 IPR011016 GO:0008270(InterPro)
Cone7ag0656 305 SUPERFAMILY RING/U-box 45 105 - -
Cone7ag0656 305 CDD RING_CH-C4HC3_MARCH 50 101 - -
Cone7ag0656 305 MobiDBLite consensus disorder prediction 7 33 - -
Cone7ag0656 305 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 11 303 - -
Cone7ag0656 305 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0879 Cone-Chr4:6222422 Cone7ag0656 Cone-Chr7:3420822 6.43E-43 dispersed
Cone6ag1592 Cone-Chr6:12370439 Cone7ag0656 Cone-Chr7:3420822 1.28E-61 dispersed
Cone7ag0656 Cone-Chr7:3420822 Cone9ag1513 Cone-Chr9:11069236 4.11E-63 dispersed
Cone4ag0696 Cone-Chr4:3554211 Cone7ag0656 Cone-Chr7:3420822 8.27E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0656 - - - 0.0