Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0668 ATGGCTGTGATTCTTACTTCTCGTCGGGGGGAGGGTAACGTAATAATCGCCCTCGTATTATTTATTCTACTGCTACTGAGTCGCCGTCTCAACTCAGAGCCAACTCAGGACAAGCAATCTCTCCTTGCTTTCCTCACACAAACCCCGCACCAGAACCGGGTTCAATGGAACGCCTCCGACTCGGTCTGCAACTGGGTCGGTGTCGTCTGCGACGCCAACCAATCCTACGTATCGGAGCTCCGTTTACCCGGAGTAGGCCTCGTGGGCCCGATTCGCCCCAACACTATCGGCCTGCTGAGTCAGCTCCGAGTCCTGAGTCTCCGCTCTAACCGCCTCTCCGGTACAATCCCCTCCGATTTCTCGAATTTGACTCTCCTTCGCAATCTCTACCTTCAAGACAACGAGCTATCCGGCGAGTTCCCGCCCCCACTGACTCGGTTGACTCGGTTGACTCGTCTCGACCTCTCGTCTAACAACTTCACCGGCTCAATCCCGTTCTCTGTCAACAACCTCACTCACTTGACGAGACTTTTCTTACAAATCAATAACTTCTCCGGCAAGCTTCCGAGCATCGCAACCGTCAGATTAGAAAGCTTCAACGTGTCGAACAACAATCTTAACGGTTCGATCCCGAAAACTTTATCTCACTTCACTAAATCGTCATTCTCTGGCAACTTAGGTCTCTGCGGCGGACCATTACCGCCGTGCAGCCCATTCTTTCGGTCCCCAGCTCCTTCCCAGGCGGAAGCAGAAACTCCACCAGCAACCGCCGCTAAAAAGTCGAAAAAAAAGCTCTCAAAAGGCGCCATTGTTGGAATTATAATCGCCGCGGTATTCCTCGCTCTCTTAGTACTCCTTCTACTCCTCTTCCTCTGCCTCCGGAACCGTCGACGACAACCGAAGAAACCCCCTGCACCTGTATCCGCCACGACCATGGCTCGTTCTGTCCCGGCGGCGGAGGCGGGAACATCCTCGTCGAAGGACGACATTACAGGAGGATCGTCAATGGAAGCGGGAGAGAGAAACAAGCTGGTGTTTTTCAAAGGAGGAGGTTACAGTTTTGATCTGGAGGATCTGTTGAGAGCGTCGGCGGAGGTGCTGGGGAAGGGGAGTGTAGGAACGTCGTATAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTGGTGAAGAGGTTGAAAGACGTGGTGGCGACGAAGAAGGAGTTCGAATCGGTAATGGAGGATTTAGGGAAGGTGATGAAGCACGAGAATGTGGTTCCTCTTCGTGCCTATTACTATTCCAAGGATGAGAAATTGATCGTCTCTGATTTCATGCCGGCTGGTAGCCTGTCTGCTTCACTTCACGGCAGTCGGGGCTCGGGCCGGACTCCGCTCGACTGGGACCGAAGGATGAGAATAGCACTAAACTCTGCAAGAGGGCTGGCCCATCTACACCACTCTAACATAGTCCACGGCAACATAAAATCCTCCAACGTCCTCCTCCGCCGGGATGAGGCTTCCCTCTCTGACTTCGGGCTCCACCCGCTATTTGGGGCATCAAGCCCGCCCAACCGTGTTGCGGGCTACCGGGCCCCGGAAGTAATCGAGACCCGGAAGCCCACATTCAAGTCCGACATTTACAGTTTGGGCGTATTGCTGTTAGAACTCTTAACAGGAAAAGCACCCAATCAGGCGTCATTGAACGAGGAGGGGATCGATCTTCCAAGGTGGGTCCAGTCAGTGGTTAGGGAAGAATGGACTGCCGAGGTTTTTGACGTGGAGTTGATCAGGTATCATCATGACATTGAAGAGGAGATGGTTCAGCTGTTGCAAATAGCGATGTCGTGCGTGTCCACTGTACCTGATCAGAGGCCTACCGTACAGGATGCGGTCCGTATGATTGAGGAGATTAATAGAGGTGGAGGAGGAGGGGATCAGACAACCGATGATGGGTTACGACAGTCGTCTGATGATCCATCTAAAGGTTCTGGTGGTCAAACCCCGGCTGAATCGAGGACCCCACCAAGTGTCGTCACACCTTAA 2019 53.44 MAVILTSRRGEGNVIIALVLFILLLLSRRLNSEPTQDKQSLLAFLTQTPHQNRVQWNASDSVCNWVGVVCDANQSYVSELRLPGVGLVGPIRPNTIGLLSQLRVLSLRSNRLSGTIPSDFSNLTLLRNLYLQDNELSGEFPPPLTRLTRLTRLDLSSNNFTGSIPFSVNNLTHLTRLFLQINNFSGKLPSIATVRLESFNVSNNNLNGSIPKTLSHFTKSSFSGNLGLCGGPLPPCSPFFRSPAPSQAEAETPPATAAKKSKKKLSKGAIVGIIIAAVFLALLVLLLLLFLCLRNRRRQPKKPPAPVSATTMARSVPAAEAGTSSSKDDITGGSSMEAGERNKLVFFKGGGYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVATKKEFESVMEDLGKVMKHENVVPLRAYYYSKDEKLIVSDFMPAGSLSASLHGSRGSGRTPLDWDRRMRIALNSARGLAHLHHSNIVHGNIKSSNVLLRRDEASLSDFGLHPLFGASSPPNRVAGYRAPEVIETRKPTFKSDIYSLGVLLLELLTGKAPNQASLNEEGIDLPRWVQSVVREEWTAEVFDVELIRYHHDIEEEMVQLLQIAMSCVSTVPDQRPTVQDAVRMIEEINRGGGGGDQTTDDGLRQSSDDPSKGSGGQTPAESRTPPSVVTP 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3576910 3580192 + Conep07aG0069100.1 Cone7ag0668 441264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0668 672 PANTHER OS05G0588300 PROTEIN 18 636 IPR050994 -
Cone7ag0668 672 MobiDBLite consensus disorder prediction 240 259 - -
Cone7ag0668 672 MobiDBLite consensus disorder prediction 629 672 - -
Cone7ag0668 672 Gene3D Ribonuclease Inhibitor 196 237 IPR032675 -
Cone7ag0668 672 Pfam Protein kinase domain 365 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0668 672 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 437 635 - -
Cone7ag0668 672 MobiDBLite consensus disorder prediction 299 335 - -
Cone7ag0668 672 SUPERFAMILY L domain-like 57 235 - -
Cone7ag0668 672 SUPERFAMILY Protein kinase-like (PK-like) 365 628 IPR011009 -
Cone7ag0668 672 ProSiteProfiles Protein kinase domain profile. 361 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0668 672 Gene3D Phosphorylase Kinase; domain 1 331 436 - -
Cone7ag0668 672 Gene3D Transferase(Phosphotransferase) domain 1 437 641 - -
Cone7ag0668 672 MobiDBLite consensus disorder prediction 649 672 - -
Cone7ag0668 672 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515(InterPro)
Cone7ag0668 672 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515(InterPro)
Cone7ag0668 672 MobiDBLite consensus disorder prediction 317 332 - -
Cone7ag0668 672 FunFam Probable inactive receptor kinase RLK902 34 192 - -
Cone7ag0668 672 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Cone7ag0668 672 FunFam pollen receptor-like kinase 1 331 436 - -
Cone7ag0668 672 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Cone7ag0668 672 Pfam Leucine rich repeat 91 136 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0703 Cone-Chr4:3675336 Cone7ag0668 Cone-Chr7:3576910 0 dispersed
Cone5ag0167 Cone-Chr5:695792 Cone7ag0668 Cone-Chr7:3576910 2.82E-70 dispersed
Cone7ag0011 Cone-Chr7:60050 Cone7ag0668 Cone-Chr7:3576910 3.43E-55 dispersed
Cone7ag0668 Cone-Chr7:3576910 Cone8ag0259 Cone-Chr8:1498559 6.08E-124 dispersed
Cone16ag0765 Cone-Chr16:8626927 Cone7ag0668 Cone-Chr7:3576910 6.39E-225 wgd
Cone2ag0274 Cone-Chr2:1410258 Cone7ag0668 Cone-Chr7:3576910 7.45E-226 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83020 PF00069 Pkinase 1.10E-42 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0668 - - - 0.0