Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0673 ATGAAGAAGACTCACTGCGCCCTCAGCTTTGGCCTCTCGCTACTTCTCATTGCCTTCTTCTTCACGGCTCTACTCCCTGCTTCTGCTTCTGAGAAGCTTTTCTCCTTGTCCAACAATGGCGGCGGCCTCACAGACACTGAAGCTTTGTACATCAAGCAACGCCAGCTTCTCTACTACAGAGATGAGTTCGGTGACAGAGGTGAGAATGTCACCGTCGATCCTTCTTTGATCTTTGAAAACGGAAGGATTCGAAATGCTTACATCGCTTTACAAGCTTGGAAACAAGCTATTCTTTCTGATCCACTAAACTTCAGTGTTGATTGGATCGGATCTGATGTCTGTAACTACACTGGAGTTTTCTGTGCTCCGGCGCCGGATAATCACCAGATCCGAACCGTAGCCGGCATTGATCTCAACCACGGAGACATTGCCGGTTACTTACCGGAAGAGTTAGGTTTACTTGTAGATCTTGCTCTGTTTCATATTAACTCGAACAGGTTCTGTGGCACAGTGCCTCATAAGTTCAGGAATCTGAAGCGGCTTTTCGAACTGGATCTGAGTAACAATAGATTCGCCGGAAAGTTTCCTGAAGTTGTTCTTAAGCTTCCGTCGCTTAAATTCTTGGATCTGAGATTTAACGAGTTTGAAGGCGCTGTTCCGAAGCAGCTCTTCGACAAGGATCTGGACGCCATTTTCATCAACCACAATCGATTCAGGTTCGAACTGCCGGAAAATTTCGGTAACTCTCCGGTCTCTGTGATCGTGCTGGCAGATAACAAGTTCCATGGCTGCGTGCCGGCGAGCTTAGGCAACATGACGAGGCTGAACGAGATTATAATGATGAACAATGGCTTCCGCTCATGCTTACCGCCTGAGATAGGGTTTCTCAAGAACTTAACGGTGTTTGATGTGAGCTATAACGAACTCCTCGGTCCTCTGCCAGACACGATCGGAGGAATGGTGAGCTTAGAGCAACTGAACGTAGCGCATAATTTGCTCTCGGGGAATATTCCAGCGAAAATTTGTCAGTTGCCGAATCTACAGAACTTCACGTTTTCGTACAATTTCTTCACGGGCGAACCGCCGGTTTGTTTGAGAGTAGCGGATTTTGATGACCGGAGAAACTGCTTGCCTGGAAGGTCGTTACAGAGATCTAGTAAGCAATGTAATTCCTTCTTGTCTAAGCCTGTGGATTGTAGTTCGTTTGAATGTGCTTCTTTTAGACCTTCTCCCCCTGTTCATCACACCCCCCATTCGCCGCCACATTCACCACCCGGTGGGGCGCACTCGCCCGCCCTTCCTCCGCAGGGTTCTTCGCCTTCTCCACCTGTTCATCACACTCCCCATTTGCCACCGCATTCACCACCTGGTGGGACTCACTCACCCGCTCTCTCTCCTCCAGTTTCTTCTCCTTCTTCTGTTCATCACACTCCCCATTTGCCACCGCATTCACCACCTGGTGGGACCCACTCGCCCGCAGTCTCTCCTCCAATTTCTTCGCCTTCTCCTCCTGTTCATCACACCCCCCATTCGCCGCCACATTCATCATCTGGTAGTGCCCACTCGCCCTCCCATCCGCCCCAACCACAACCCACGCCCGGTTTGTCCCCTCATCCATCGCTATCTCCACCTTCCCCCTTCCCATCAACACAACCAACTTACGCTCCTGCCCCTTCGACATCTTCTTCACCTCCAGTTTACTCTCCTCCCGCCCCACCTCGGCCATCCATTTCACCATCCCCTTCGTATCCGCCAAAACCGCCATTAATTTCTCCAGGACCATCATCTCCATCTCCATCTTCACCTCCTGGCCTACCTCCGCTGTATTCTTGGCCACCACTGCCATCAACCTCTCCACAACCATCATCTCCATCACCATCTCCACGCCTACCTCCATTGTATTCTTCACCACCTCTGCCATTGATTTCTCCACAGCCATCATCACCACCACCATCTCCATATTGTCCACCACTATTACCTCCACTGTATTCTCCGCCGACATTACCCACTCCCCCACATTTATCTCCACCACTAGTTTATCCCTATTTATCACCACCACCACCACCATCTCCTCCATCAACTTCATTGCCACCGCCATCACCTCCTCCACCCATTCATTATCTACCTCCCTCTTCACCATCACCTCCTTCACCTCCTCCCTATACGTATTACTCACCTCCCCCACCATCGCCATCACCTCCTACACCACCTCCTCCCTATACATATTATTCACCTCCCTTGCCATCACCATCTCCGCCGGCACCACCACAACCCTATGTGAATCACTCACCTCCTCCACCACCGATAAAATACCATCCACAGCCCCCACCAACTCTGTCCCCACCATTGCCTTCTCCTCCTCATCCTTATAATTCTCCACCACCACCACCATCAATACCGTACCATTCTCCTCCCCCACCATCACCTCCTCCAGTCTCATATCATGAGCGTCCTCCACCATCTCCATCACCTCCATCACCTCCATCACCACCACCACCACCACCTGTTATCTACCACAGCCCCCCACCTCATACGCCCTTGTATGAGGGGCCTTTGCCGCCAATCCATGGAGTTTCGTATGCTTCTCCCCCTCCACCACCCTTCTATTGA 2610 51.19 MKKTHCALSFGLSLLLIAFFFTALLPASASEKLFSLSNNGGGLTDTEALYIKQRQLLYYRDEFGDRGENVTVDPSLIFENGRIRNAYIALQAWKQAILSDPLNFSVDWIGSDVCNYTGVFCAPAPDNHQIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFRNLKRLFELDLSNNRFAGKFPEVVLKLPSLKFLDLRFNEFEGAVPKQLFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLADNKFHGCVPASLGNMTRLNEIIMMNNGFRSCLPPEIGFLKNLTVFDVSYNELLGPLPDTIGGMVSLEQLNVAHNLLSGNIPAKICQLPNLQNFTFSYNFFTGEPPVCLRVADFDDRRNCLPGRSLQRSSKQCNSFLSKPVDCSSFECASFRPSPPVHHTPHSPPHSPPGGAHSPALPPQGSSPSPPVHHTPHLPPHSPPGGTHSPALSPPVSSPSSVHHTPHLPPHSPPGGTHSPAVSPPISSPSPPVHHTPHSPPHSSSGSAHSPSHPPQPQPTPGLSPHPSLSPPSPFPSTQPTYAPAPSTSSSPPVYSPPAPPRPSISPSPSYPPKPPLISPGPSSPSPSSPPGLPPLYSWPPLPSTSPQPSSPSPSPRLPPLYSSPPLPLISPQPSSPPPSPYCPPLLPPLYSPPTLPTPPHLSPPLVYPYLSPPPPPSPPSTSLPPPSPPPPIHYLPPSSPSPPSPPPYTYYSPPPPSPSPPTPPPPYTYYSPPLPSPSPPAPPQPYVNHSPPPPPIKYHPQPPPTLSPPLPSPPHPYNSPPPPPSIPYHSPPPPSPPPVSYHERPPPSPSPPSPPSPPPPPPVIYHSPPPHTPLYEGPLPPIHGVSYASPPPPPFY 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3656919 3660142 - Conep07aG0069600.1 Cone7ag0673 441269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0673 869 MobiDBLite consensus disorder prediction 411 869 - -
Cone7ag0673 869 Gene3D Ribonuclease Inhibitor 86 376 IPR032675 -
Cone7ag0673 869 Pfam Leucine rich repeat N-terminal domain 89 121 IPR013210 -
Cone7ag0673 869 PRINTS Proline rich extensin signature 431 443 - -
Cone7ag0673 869 PRINTS Proline rich extensin signature 446 467 - -
Cone7ag0673 869 PRINTS Proline rich extensin signature 481 497 - -
Cone7ag0673 869 PRINTS Proline rich extensin signature 500 517 - -
Cone7ag0673 869 PRINTS Proline rich extensin signature 519 544 - -
Cone7ag0673 869 PRINTS Proline rich extensin signature 404 420 - -
Cone7ag0673 869 MobiDBLite consensus disorder prediction 413 462 - -
Cone7ag0673 869 FunFam Leucine-rich repeat extensin-like protein 5 249 388 - -
Cone7ag0673 869 Pfam Leucine Rich Repeat 298 320 IPR001611 GO:0005515(InterPro)
Cone7ag0673 869 Pfam Leucine rich repeat 159 214 IPR001611 GO:0005515(InterPro)
Cone7ag0673 869 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 28 796 IPR051582 -
Cone7ag0673 869 MobiDBLite consensus disorder prediction 463 477 - -
Cone7ag0673 869 MobiDBLite consensus disorder prediction 478 510 - -
Cone7ag0673 869 FunFam Leucine-rich repeat extensin-like protein 1 87 248 - -
Cone7ag0673 869 MobiDBLite consensus disorder prediction 524 850 - -
Cone7ag0673 869 SUPERFAMILY L domain-like 88 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1835 Cone-Chr4:13239822 Cone7ag0673 Cone-Chr7:3656919 7.84E-62 dispersed
Cone5ag1503 Cone-Chr5:10171994 Cone7ag0673 Cone-Chr7:3656919 4.82E-36 dispersed
Cone7ag0673 Cone-Chr7:3656919 Cone7ag1740 Cone-Chr7:11517867 4.01E-34 dispersed
Cone16ag0754 Cone-Chr16:8541821 Cone7ag0673 Cone-Chr7:3656919 8.79E-89 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone7ag0673 Cone-Chr7:3656919 8.25E-87 wgd
Cone4ag0716 Cone-Chr4:3857442 Cone7ag0673 Cone-Chr7:3656919 6.13E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0673 - - - 0.0