Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0674 ATGGCTTCTATAATATCATCCGACCAGCAAACAGTAGTAAGCTTTGCCGATCCAAAAAACTTCGGAACCAAATTAAACTCAGGCCTAAAAGAAACATTATTTCCGGACGATCCCTTAAGTCAATTCCGAAATGAACCAGCCGCACGTCGGCCCCTTAGAGCAATCAAATATTTCATCCCCATTTTTGAATGGCTTCCCAAGTACAGCCTCCTTAAGCTGCGGTACGATGTGCTTGCCGGTATAACGCTAGTAAGCCTTGCAATCCCGCAAGGAATTAGTTACGCCAAGCTTGCTGACCTTCCTCCTATAATCGGTCTTTATTCGAGCGTGGTTCCGCCTATAATTTACGCAATATTTGGGAATTCAAATTACTTAGCGGTGGGAAATGTGGCTGCGTGCTCGTTGCTTATTGCCGAAACTATTGGAGAAGTTGCTTCACCAACAAAGGATACCAATTTGTATATCTCCTTGGTGTTTACGTCTGCTTTTGTCACCGGAGTTTTTCAATCGGCATTAGGTTTTCTAAGGCTTGGGATTTTGGTTGATTTCTTATCACACTCAACAGTGCTTGGGTTCATGGGAGGGACAGCCATACTTATTATTCTGCAACAATTTAAGGGCATGCTTGGAATGAAGACTTTTACTACTAGAACCGACGTCGTTCACGTATTGACTGCAGTATTCAAGAACAGAAAAGAGTGGAGATGGGAGAGTGCAGTTGTAGGAATTGTCTTCCTACTATTTCTTGAGTCCACTAAGTTCCTGAGAAGAAAGAAACCGAAACTATTTTGGGTATCTGCGATTTCTCCAATTGCGGTTGTTATTGCCGGAGGCATCTTTGCCTTTATAATAAAGGGGGACGAACATGGAATCCGAACTGTGGGTCCTCTAAAGAAAGGAATAAACCCTCTTTCAATACGTATGTTAGTATTTGATTCCAAGTACTTTACAGCAGTGGCCAAAGCTGGGATCATAACTGGGGTAGTAGCTTTGGCGGAAGGGATAGCAATAGGAAGGAGCTTTGCCATTATGAGAAATGAATACGTTGATGGGAACAAAGAGATGGTGGCTTTTGGGCTCATGAACATTGTTGGATCTTTCTTTTCGAGCTACTTGACCACTGGGCCATTCTCGAAAACTGCAGTGAACTTCAATGCGGGGGCTAAGACGCCGATTACCAACTTAGTGATGGCAGCCTGCATGGCCCTTGTACTCTTGTTTTTAGCGCCTCTCTTTAGTCATACACCTCTTGTAGCCTTGTCTGCAATCATCATGTCCGCCATGTTAGGGCTTATCAAGTACGAGGAAGTTTACCACATTTTCAAGGTTGACAAGTTCGATTTCCTCATTTGCATGGCTGCTTTCTTCGGTGTTTCCTTTTGGAGCATGGATATGGGTATCCTCATTTCAGTCGCACTTGCAATACTGAGAGCACTCCTATACGTAGCTAGACCAGCAAGTTGCAAGCTTGAGAAGATACAAAACACAACTTTGTATCGTGACACCCAACAATACCCTAATTCAGTCCGGCTACCTAGAATCCTTGTTCTTCAACCTGGTTCCCCTATTTATTATGCAAATGCCAACTACGTAAGAGATAGGACGTTGAGGTGGATTCGAGAAGAGCAGGAGCAAGCAGATACAGTTAATCATGTTCTATTCGAATTGTCAGGAGTCACAGCCATAGACATGACCGGCATTGAAACATTGATCGAGTTACGAAGAACATTGAACGACAGAGGGATTAAGATAATGATTGTGAACCCAAGAATTGGAGTGATGGAAAAGTTGATAGCTTCACACTTTGTAGACACATTGGGGAAGGAAAATTTTTTCTTGTCAGTAGAAGATGCAGTGCAGGCATGTCAGTTTTTGCTTGAGAAATCTAACGAAGTTGACTTAAGAAATTAA 1911 42.86 MASIISSDQQTVVSFADPKNFGTKLNSGLKETLFPDDPLSQFRNEPAARRPLRAIKYFIPIFEWLPKYSLLKLRYDVLAGITLVSLAIPQGISYAKLADLPPIIGLYSSVVPPIIYAIFGNSNYLAVGNVAACSLLIAETIGEVASPTKDTNLYISLVFTSAFVTGVFQSALGFLRLGILVDFLSHSTVLGFMGGTAILIILQQFKGMLGMKTFTTRTDVVHVLTAVFKNRKEWRWESAVVGIVFLLFLESTKFLRRKKPKLFWVSAISPIAVVIAGGIFAFIIKGDEHGIRTVGPLKKGINPLSIRMLVFDSKYFTAVAKAGIITGVVALAEGIAIGRSFAIMRNEYVDGNKEMVAFGLMNIVGSFFSSYLTTGPFSKTAVNFNAGAKTPITNLVMAACMALVLLFLAPLFSHTPLVALSAIIMSAMLGLIKYEEVYHIFKVDKFDFLICMAAFFGVSFWSMDMGILISVALAILRALLYVARPASCKLEKIQNTTLYRDTQQYPNSVRLPRILVLQPGSPIYYANANYVRDRTLRWIREEQEQADTVNHVLFELSGVTAIDMTGIETLIELRRTLNDRGIKIMIVNPRIGVMEKLIASHFVDTLGKENFFLSVEDAVQACQFLLEKSNEVDLRN 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3672639 3676874 - Conep07aG0069700.1 Cone7ag0674 441270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0674 636 Pfam STAS domain 505 618 IPR002645 -
Cone7ag0674 636 PANTHER SULFATE TRANSPORTER 48 623 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone7ag0674 636 Gene3D STAS domain 484 624 IPR036513 -
Cone7ag0674 636 CDD STAS_SulP_like_sulfate_transporter 505 615 - -
Cone7ag0674 636 ProSiteProfiles STAS domain profile. 504 622 IPR002645 -
Cone7ag0674 636 Pfam Sulfate permease family 73 454 IPR011547 GO:0016020(InterPro)
Cone7ag0674 636 SUPERFAMILY SpoIIaa-like 509 622 IPR036513 -
Cone7ag0674 636 NCBIfam sulfate permease 60 618 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1354 Cone-Chr4:11038032 Cone7ag0674 Cone-Chr7:3672639 1.11E-171 dispersed
Cone6ag1580 Cone-Chr6:12317946 Cone7ag0674 Cone-Chr7:3672639 4.11E-162 dispersed
Cone7ag0674 Cone-Chr7:3672639 Cone7ag1578 Cone-Chr7:10808977 1.71E-183 dispersed
Cone16ag0684 Cone-Chr16:8169836 Cone7ag0674 Cone-Chr7:3672639 5.05E-189 wgd
Cone17ag0187 Cone-Chr17:889603 Cone7ag0674 Cone-Chr7:3672639 2.04E-192 wgd
Cone2ag0336 Cone-Chr2:1768979 Cone7ag0674 Cone-Chr7:3672639 3.50E-55 wgd
Cone20ag1225 Cone-Chr20:8126898 Cone7ag0674 Cone-Chr7:3672639 7.20E-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0674 K17471 - csv:116402148 833.558