Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0677 ATGGGGGAAGGAGAGGGAGAAGGCGATTTCCCTCCGAAGAATGTTCAATCCGATGGTGCGCCGCCTAGCAACGCTGTGTCGTCGGAAATTCCTGCTAAGAAGCTTGCAAGGCAGCTGGATTTTACGAGATTTGGAGGAGGAGTAGTAGTTTCAGGAAGTGCGGTTTTTCCGGAGCATCCTCAGCCTCAGTCATCGTCACAGTCTCAGTCGCAACCTGTCAAGGTGTCACGGAGTACTTCCTTACAGTTGCCGTCGCAATCTCAGCCACAGATGGTGGCCATGCCTGTGGGCCTCCAGGTCCAACATTCTTCAACTAGGCCCGTAAAACCAGAGTCCCCAAAGTCAAGACCAAGATCCAATGTTGAATCGCAAGAAGGCACTCCGAAAAAGCAGAAGCAGTGTAACTGTAAACATTCACGATGCTTAAAGTTGTACTGTGAATGTTTTGCATCAGGAATATACTGTGATGGGTGTAATTGCAATAATTGTTATAACAATGTTGAAAATGAAGCTGCTAGAAGAGAGGCGGTAGAAGCCACTCTAGAGCGCAATCCGAATGCATTCCGACCAAAAATTGCAAGTAGTCCACATGGAACACGAGATAACCGGGAGGAAGCTGGAGATGTTTTACTATTGGGAAAACACAACAAAGGATGCCATTGTAAGAAATCGGGGTGTCTGAAAAAGTATTGTGAGTGCTTCCAAGCAAACATTCTTTGCTCTGATAATTGTAAATGCATGGACTGTAAAAATTTTGAGGGAAGTGAGGAGAGACAGGCTCTTTTCCATGGCGACCATGGAAACAACATTGCATATATTCAGCAGGCAGCCAATGCAGCAATAACCGGAGCCATTGGATCCTCTGGCTATGCACCATCTCCTCCAGTTTCCAAGAAAAGAAAAAGTCACGAGCTCTTCTGTGGACCAAATGCAAAGGATCCATCCATTCATAAGCTTGCACAATATCAACAGGTGAACAATGTTCGGGCAGCGGCCCCCTCTTTGTTGCATCCTGTCCCAGGCACTCGTATTGGTGGTCCTGCAACACTAGGTCCTTCAAAGTTCACATACAGGTCTTTGTTAGCAGACATCATTCAACCTCAGGACTTGAAGGAGCTTTGCTCCGTTTTGGTGGTCTTATCAAGTGAAGCAGCTAAGACCCTTGCAGAACAAAAAAATGCAACAGAAAAGCGAGCAGAGGATCAGGCACAGACTTCTGTTGCTTCTTTAACTCAAAATGGGTTGCAGAGCCAGAAGGAACTGGGCGTGAAAGCAGTGGCTGATCGTTCAAGTGCAAACCAAGACAGTAAAGCTGATGCAGATGATTCAAGTTCAGAGGGTTCGGATGTGCCTAAAACAAGGCCAATGTCCCCTGGGACCTTAGCTTTGATGTGTGATGAGCAAGACCCAATGTTCATGGCAGCTGCTTCTCCTACTGGGTTTGTGGGCCATAGCTGCAGTACATCATCACAGTTTCCTTACGGACAAGACATGACCGAAGTCTATGCTGAGCAGGAGCGAATTGTCATGACAAAGTTTCGGGATTGTCTTAACCGGCTCATCACTCTTGGGGAGATTAAAGAAACAAATCGCTCGTCTTTTGCTAGAAATGAATTAGGGAGCGAGAAAGACCAGCATATCAATGGCAACGCAAATACGAGAAGTGAAAGTGGAAGTCAACCAAGACCGCCCACTAGTAATGGGGTCCTGAAATCTGTTATTCCTTTTACGTCCAAGACATCACAGATAATTACAGAATTGACTGCTAAGCAGGATTCAATTCCGACTACCCCATCGATGCCCGAAAATGGGAATAGCAAGCCATGGATTGAGAAAGAGATGTAG 1845 46.29 MGEGEGEGDFPPKNVQSDGAPPSNAVSSEIPAKKLARQLDFTRFGGGVVVSGSAVFPEHPQPQSSSQSQSQPVKVSRSTSLQLPSQSQPQMVAMPVGLQVQHSSTRPVKPESPKSRPRSNVESQEGTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCNNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDNREEAGDVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFEGSEERQALFHGDHGNNIAYIQQAANAAITGAIGSSGYAPSPPVSKKRKSHELFCGPNAKDPSIHKLAQYQQVNNVRAAAPSLLHPVPGTRIGGPATLGPSKFTYRSLLADIIQPQDLKELCSVLVVLSSEAAKTLAEQKNATEKRAEDQAQTSVASLTQNGLQSQKELGVKAVADRSSANQDSKADADDSSSEGSDVPKTRPMSPGTLALMCDEQDPMFMAAASPTGFVGHSCSTSSQFPYGQDMTEVYAEQERIVMTKFRDCLNRLITLGEIKETNRSSFARNELGSEKDQHINGNANTRSESGSQPRPPTSNGVLKSVIPFTSKTSQIITELTAKQDSIPTTPSMPENGNSKPWIEKEM 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3722160 3727389 + Conep07aG0070000.1 Cone7ag0677 441273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0677 614 MobiDBLite consensus disorder prediction 1 31 - -
Cone7ag0677 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 217 251 IPR005172 -
Cone7ag0677 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 131 166 IPR005172 -
Cone7ag0677 614 ProSiteProfiles CRC domain profile. 130 254 IPR005172 -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 392 462 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 51 87 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 57 87 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 400 419 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 544 573 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 588 614 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 99 131 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 588 604 - -
Cone7ag0677 614 PANTHER TESMIN/TSO1-RELATED 38 528 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cone7ag0677 614 SMART CXC_2 214 255 IPR033467 -
Cone7ag0677 614 SMART CXC_2 129 169 IPR033467 -
Cone7ag0677 614 Coils Coil 164 184 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 534 573 - -
Cone7ag0677 614 MobiDBLite consensus disorder prediction 434 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0303 Cone-Chr2:1559684 Cone7ag0677 Cone-Chr7:3722160 2.09E-223 dispersed
Cone4ag0261 Cone-Chr4:1167255 Cone7ag0677 Cone-Chr7:3722160 5.41E-32 dispersed
Cone7ag0270 Cone-Chr7:1123293 Cone7ag0677 Cone-Chr7:3722160 9.75E-31 dispersed
Cone16ag0733 Cone-Chr16:8445233 Cone7ag0677 Cone-Chr7:3722160 1.06E-214 wgd
Cone4ag0740 Cone-Chr4:4067839 Cone7ag0677 Cone-Chr7:3722160 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46488 PF13181 TPR_8 0.015 CL0020 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0677 - - - 0.0