Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0702 ATGGGTTGTGTTTATTCTCGTGTTTGCATCGGTCAAGTTTCCACTCCAAGAAATTCGAGGCTAACTCGAGCCAGAAATTCTAAAGCCGAAGCTGAAAAGATCACCAGATTCTCTCCTTCTTCTTCCTTCAATGAAGAAGAAGACGAAAATGGAGACGAATTGAATCAGTTAAACGCAAACAGAGATTCGGAGGTAGGAATTACAAGACTCTCTAGGGTTTCATCTCAATTCTTACCTCCTGATGGGTCTAGAACCGTCAAAATCCCTTCCGGAAACTATGAGCTTAAGTTCTCTTTCTTATCCCAAAGAGGGTATTATCCGGATGCTCTTGATAAAGCTAATCAAGACAGTTTTTGCATTCACACCCCATTTGGAACAAACCCAGATGATAATTTCTTCGGAGTTTTTGATGGGCATGGAGAATTTGGAGCCCAATGTTCCCAATTCGTGAAGCGAAAATTATGTGAGAATTTGCTTAGGAATAATAGATTTCATTCAGATCCAGTTGAAGCTTGTCATTCATCGTTTTTAGCCACAAATTCTCAGTTACATGTGGATACTTTGGACGATAGCATGAGTGGCACAACAGCAATTACGGTCTTAGTTCGTGGAAGGACAATTTACGTGGCTAATTCAGGTGATTCAAGGGCGGTTTTGGCCGAGAGGAGAGGGAAGGATATTGTGGCCGTGGACCTTTCCATTGATCAAACCCCATTTAGGACTGATGAGCTTGAACGGGTCAAGCTATGTGGGGCCCGGGTTCTTACATTCGATCAAATCGAAGGGTTGAAGAACCCGGAAGTGCAGTGTTGGGGCACGGAAGAAGGGGATGATGGGGACCCACCTCGGCTTTGGGTTCCCAATGGCATGTACCCTGGTACGGCTTTTACGAGGAGTATAGGGGATTCTATAGCAGAATCCATTGGTGTTGTTTCTACACCAGAAATTGTGGTGTTGGAGCTTTCACCGGATCATCCTTTCTTTGTGCTTGCTAGTGATGGAGTGTTTGAGTTTCTTTCGAGCCAAAATGTGGTTGACATGGTAGCAAAATTTAAAGATCCACGAGATGCTTGTGCTGCAATTGTAGCCGAGTCTTACAGGCTTTGGCTCCAATACGAAACCCGAACTGATGATATTACTGTCATCGTTGTGCATATTAACGGGCTCACTAATAGCGTCGTGAGTGAATCAGTTAGTCCTGGAGGTGCTATACAATCACCTATACCTCAAATTGTTGAGCTGACAGGATCGGAATCTCCTTCGACCTTAGCATGGAATCCAAAAAATTCTCGGGTGAGGCATGATTTGTCAAGAGCTCGTCTCCGTGCTATAGAAAGCTCTCTTGAAAATGGGCAACAGATATGGGTCCCTCCATCTCCGGCTCATAGGAAGACTTGGGAGGAACAAGCGCACATTGAGCGAGCATTGCATGATCATTTCCTCTTCAAGAAACTCACCGATTCTCAGTGCCATGTTTTATTAGATAGCATGCAAAGGGTTGAGGTTCAGCCTGGGGAAGTTGTAGTTGAACAGGGTGGTGAAGGTGACTGTTTTTATGTGGTTGGTAGTGGAGAATTTGAGGTCTTCGCAAATCAGGAAGAAAATAACAGAGAGGTTCCCCGAGTTCTACAGCGTTATACAGCTGAGAACTTATCTTCCTTTGGAGAGCTTGCACTAATGTATAACAAACCCCTCCAAGCATCAGTCAGAGCTGTAACACACGGAACACTTTGGGCTTTGAAAAGAGAAGACTTTCGTGGAATTCTTATGTCGGAATTTACCAATCTATCCTCCTTGAAGTTGCTTAGATCAGTAGATCTTCTATCAAGATTGACAATCATGCAGCTTAGTCGAATTGCAGATTGTCTTTCCGACATGTCTTTCTCAGATGGCCAACCTATAGTTAATAAGAGCGAACACTTGAATGCATTGTACATAATCCAAAAGGGACAAGTGAGGATTACTTTTGACAGAGATTTAAATAGTGCAAACATTAGCAGCCTCAACTTTCAAGGCCAGAAGAATCCACAAAGCAGTGAAAATATTTCAGTGGTCAAGACTGAAGGAAGCTATTTCGGAGAATGGACACTTCTTGGAGAAAATGTTGACTCCTTAAGTGCAGTTGCTGTTGGTGATGTTGTCTGTGTCTTTTTAACAAAGGAAAAATTTGAGTCGGTTGTGGGCCCCATAGCGAAGATTTCTCAAGATGATCAAAAGGCAAAGGATCAATCTTCAGACTTCCCCAAGGAATCTTCCAAGTCTGTCAATATTTCAGGTCTTACTAATGTTGAGCTAACTGACCTGGTATGGAAAAGATGTATATACTCCAACGACTTCAGCGAGATTGGGCTTGTACAGTTAAAGAATTCAGAAAATGTGCTTAGTCTAAAAAGATTTTTAAAGCAGAAGGTGAAAAGACTAGGGAAGGAATCACAAGTGTTGAAGGAGAAGAATCTCTTGAAGAGCTTGAGCCTTTCGGCTTATGTGCCTCAATTTCTTTGCACTTGTTCGGATCAATCACATGCGGGGATATTGTTTAATACATACCTTGCTTGTCCATTGTCTTCAATTCTTCTTACTCCACTAGATGAGCCATCTGTGCGTTTCATTGCGGCCTCTCTTGTTATTGCCTTAGAAGATTTGCACAAGAATGCCATTCTCTACAGAGGAATCTCTCCAGATGCTTTAATGTTGGACCGAACTGGACATATACAGTTGGTGGACTTCATGTTTGGAAAGAAGTTATTGAATGAGCGAACGTTTACTATTTGTGGAACGGCCGACTTTTTAGCTCCTGAGATAGTCCAGGGAAAAGGCCACGGGTTTGCTGCTGACTGGTGGGCCCTTGGAGTGTTAATCTATTTCATGCTGAAAGTGGAATTGCCATTTGGATCGTGGAGAGAGAGCGAGGTCGACACATTTGCCAAAATTGCTAAAGGATATTTAAATCTTCCTCAGATCTTCAGTCCTGAAGTTATCGATCTTCTCACCAAGTTACTTGAAGTCAATGAAAATGCAAGACTCAGAGGTGAAGGGTCTGGGACCCGTTCTGGGTCCATACGAAGCCATCCGTGGTTCAATGGTGTTGATTGGAAAGGGATCAAAGACTCTACTTTTCCTGTTCCTACTGTGATTCTTTCTCGGGTTTCTCTACATTTGGAAAGTTATTCTGAAGATTGTAGTGTTCCTTTAGTTAACCCTCTTCAAGATGAAGACGAAAGCATTACGGAATGGATAGATGAGTGGTAG 3249 42.81 MGCVYSRVCIGQVSTPRNSRLTRARNSKAEAEKITRFSPSSSFNEEEDENGDELNQLNANRDSEVGITRLSRVSSQFLPPDGSRTVKIPSGNYELKFSFLSQRGYYPDALDKANQDSFCIHTPFGTNPDDNFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNRFHSDPVEACHSSFLATNSQLHVDTLDDSMSGTTAITVLVRGRTIYVANSGDSRAVLAERRGKDIVAVDLSIDQTPFRTDELERVKLCGARVLTFDQIEGLKNPEVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAESIGVVSTPEIVVLELSPDHPFFVLASDGVFEFLSSQNVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTNSVVSESVSPGGAIQSPIPQIVELTGSESPSTLAWNPKNSRVRHDLSRARLRAIESSLENGQQIWVPPSPAHRKTWEEQAHIERALHDHFLFKKLTDSQCHVLLDSMQRVEVQPGEVVVEQGGEGDCFYVVGSGEFEVFANQEENNREVPRVLQRYTAENLSSFGELALMYNKPLQASVRAVTHGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTIMQLSRIADCLSDMSFSDGQPIVNKSEHLNALYIIQKGQVRITFDRDLNSANISSLNFQGQKNPQSSENISVVKTEGSYFGEWTLLGENVDSLSAVAVGDVVCVFLTKEKFESVVGPIAKISQDDQKAKDQSSDFPKESSKSVNISGLTNVELTDLVWKRCIYSNDFSEIGLVQLKNSENVLSLKRFLKQKVKRLGKESQVLKEKNLLKSLSLSAYVPQFLCTCSDQSHAGILFNTYLACPLSSILLTPLDEPSVRFIAASLVIALEDLHKNAILYRGISPDALMLDRTGHIQLVDFMFGKKLLNERTFTICGTADFLAPEIVQGKGHGFAADWWALGVLIYFMLKVELPFGSWRESEVDTFAKIAKGYLNLPQIFSPEVIDLLTKLLEVNENARLRGEGSGTRSGSIRSHPWFNGVDWKGIKDSTFPVPTVILSRVSLHLESYSEDCSVPLVNPLQDEDESITEWIDEW 1082
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4021963 4030978 + Conep07aG0072900.1 Cone7ag0702 441298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0702 1082 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 455 595 - -
Cone7ag0702 1082 SUPERFAMILY Protein kinase-like (PK-like) 766 1042 IPR011009 -
Cone7ag0702 1082 Gene3D - 91 387 IPR036457 -
Cone7ag0702 1082 SUPERFAMILY PP2C-like 84 388 IPR036457 -
Cone7ag0702 1082 CDD PP2Cc 112 386 IPR001932 -
Cone7ag0702 1082 PRINTS cAMP-dependent protein kinase signature 552 561 - -
Cone7ag0702 1082 PRINTS cAMP-dependent protein kinase signature 502 516 - -
Cone7ag0702 1082 PRINTS cAMP-dependent protein kinase signature 517 531 - -
Cone7ag0702 1082 PRINTS cAMP-dependent protein kinase signature 723 735 - -
Cone7ag0702 1082 Pfam Cyclic nucleotide-binding domain 500 591 IPR000595 -
Cone7ag0702 1082 Pfam Cyclic nucleotide-binding domain 627 726 IPR000595 -
Cone7ag0702 1082 ProSiteProfiles Protein kinase domain profile. 768 1026 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0702 1082 ProSiteProfiles PPM-type phosphatase domain profile. 96 386 IPR001932 -
Cone7ag0702 1082 Pfam Protein kinase domain 779 1026 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0702 1082 SUPERFAMILY cAMP-binding domain-like 461 591 IPR018490 -
Cone7ag0702 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 607 729 IPR000595 -
Cone7ag0702 1082 SUPERFAMILY cAMP-binding domain-like 599 729 IPR018490 -
Cone7ag0702 1082 Coils Coil 797 817 - -
Cone7ag0702 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 481 590 IPR000595 -
Cone7ag0702 1082 SMART PP2C_4 96 384 IPR001932 -
Cone7ag0702 1082 Gene3D Jelly Rolls 597 746 IPR014710 -
Cone7ag0702 1082 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 353 1044 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Cone7ag0702 1082 SMART cnmp_10 607 742 IPR000595 -
Cone7ag0702 1082 SMART cnmp_10 481 605 IPR000595 -
Cone7ag0702 1082 Gene3D Jelly Rolls 456 596 IPR014710 -
Cone7ag0702 1082 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169(InterPro)
Cone7ag0702 1082 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 91 388 - -
Cone7ag0702 1082 Gene3D Transferase(Phosphotransferase) domain 1 853 1043 - -
Cone7ag0702 1082 MobiDBLite consensus disorder prediction 21 59 - -
Cone7ag0702 1082 Gene3D Phosphorylase Kinase; domain 1 770 852 - -
Cone7ag0702 1082 CDD CAP_ED 481 590 IPR000595 -
Cone7ag0702 1082 Pfam Protein phosphatase 2C 122 364 IPR001932 -
Cone7ag0702 1082 SMART serkin_6 775 1026 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0702 1082 CDD CAP_ED 607 729 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0702 Cone-Chr7:4021963 Cone8ag1481 Cone-Chr8:11312853 1.06E-26 dispersed
Cone4ag0752 Cone-Chr4:4192648 Cone7ag0702 Cone-Chr7:4021963 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83021 PF00012 HSP70 1.90E-262 CL0108 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0702 - - - 0.0