Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0704 ATGTCGTGGCAGACTTACGTCGACGAGCATTTGATGTGTGACATTGATGGCCAAGACCAGCACCTCTCGCACGCTGCCATTGTTGGCCATGACGGCAGTATTTGGGCCCAGAGCTCTTCCTTCCCTCAGTTTAAGGGTCAGGAGATCACTGGTATCATGAAGGATTTTGAGGAACCTGGTCATCTTGCTCCTACTGGATTGCACATTGGGGGCACTAAATACATGGTTATCCAGGGAGAGTCCGGAGCTGTCATTCGTGGGAAGAAGGGATCAGGAGGTATCACTATAAAGAAGACTACACAAGCACTGGTTTTTGGCATTTATGAAGAACCTGTCACTCCAGGTCAATGCAACATGGTTGTTGAGAGGTTGGGTGATTACCTCGTTGATCAGGGCCTCTAG 402 49.25 MSWQTYVDEHLMCDIDGQDQHLSHAAIVGHDGSIWAQSSSFPQFKGQEITGIMKDFEEPGHLAPTGLHIGGTKYMVIQGESGAVIRGKKGSGGITIKKTTQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4037336 4038894 + Conep07aG0073100.1 Cone7ag0704 441300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0704 133 Pfam Profilin 1 132 IPR048278 GO:0003779(InterPro)
Cone7ag0704 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779(InterPro)
Cone7ag0704 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Cone7ag0704 133 FunFam Profilin 1 133 - -
Cone7ag0704 133 PANTHER PROFILIN 1 132 IPR005455 GO:0003779(InterPro)|GO:0003785(PANTHER)|GO:0005938(PANTHER)|GO:0042989(PANTHER)
Cone7ag0704 133 CDD PROF 2 132 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 SMART prof_2 1 133 IPR005455 GO:0003779(InterPro)
Cone7ag0704 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0704 Cone-Chr7:4037336 Cone7ag1162 Cone-Chr7:8672099 5.01E-88 dispersed
Cone7ag0704 Cone-Chr7:4037336 Cone7ag0705 Cone-Chr7:4046613 4.47E-77 tandem
Cone4ag0755 Cone-Chr4:4223685 Cone7ag0704 Cone-Chr7:4037336 1.96E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0704 K05759 - rcu:8265127 245.743