Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0724 ATGATTCTCAGGGAACGCCACCGCCCTATTCCAACGGTCCACGTTCCGCCGTGGACGATACCCGTCGATCCAACCACTGAGACTTACTCGCCCCGCCCGGTCAGCGGCGTAACCGTCAACTCTAGCGACATTGCTCGCGGCGGAGAGCACTTTTCTCCCCGTTACCTTCATGAAGCCCTGACGGCCTTCCAGAGTTATCTACCATCTAACGAACAGGACCCCTCGTCCTTCCCAGTCAGCGGCGTGACCATCAACTCTAACGGCATTGCAGACGGCGGAGAGCACTGTTCTTCCCGTTACCTTCACCAAGCCCTAACGGCCTTCAAGCGTTATCTGCCGTCTAGCGAGTCGGACCCTGACCCCGACCTGGATTTCTTCTCCGGTCCAGATTCCGACGCTCCAATAGACGCCTACTCCTGCGATCAATTTCGTATGTATGAGTTCAAGGTGCGGCGGTGCGCACGAGGACGATCACATGACTGGACGGATTGTCCGTACGTTCATCCCGGCGAAAAGGCTCGACGTCGTGATCCTAGGAAGTATCACTACTCCGGCACGGCGTGCCCTGAGTTCCGGAAAGGAAGTTGTAAGAAAGGCGAGCTCTGCGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTGCATCCGGCTCGGTACAGGACTCTGCCTTGTAAGGACGGAACGAGTTGTCAGAGACGTGTCTGTTTTTTCGCTCACACTCCTGAGCAGCTAAGGGTTCTGCCGTCACAGAGTTCACAAAACGTATCGCCGCCGCTGAGTCCGGTGGATTCGTCACCGCCTTTGTCGCCGATGAACAAGTCCCCGATCCACGAAATTGTAGCGTCGCTTCGGAGGTTACATCTTGGTAAGGTTAACAAATCTCAACCCGGTTCTTGGACGGCTCATGTCGGATCTCCTAATAACATTGTCTGGTCCCCAAGAGGGTCGGTGCTCCGACCCGAATTGTTTTGCCTTCCAACGACTCCAAACGGGGCTCCGAGCCGTGCTGGAATCGGGTATTTGAATCTATGGGAACAGGAGTGTGACGAGCCGGCGATGGAGCGGGTCGAATCGGGAAGAGGTTTGCGGGTTAAGATGTTTGAGAGGCTTTTGAGTAATGAGAACTGTCTCGAGCGGGGTGACCCGGATCCTTCTAGTAGCCGTCCGGATCTTAGATGGGTTTCGGAGCTTGTGAAGTGA 1197 55.56 MILRERHRPIPTVHVPPWTIPVDPTTETYSPRPVSGVTVNSSDIARGGEHFSPRYLHEALTAFQSYLPSNEQDPSSFPVSGVTINSNGIADGGEHCSSRYLHQALTAFKRYLPSSESDPDPDLDFFSGPDSDAPIDAYSCDQFRMYEFKVRRCARGRSHDWTDCPYVHPGEKARRRDPRKYHYSGTACPEFRKGSCKKGELCEFAHGVFECWLHPARYRTLPCKDGTSCQRRVCFFAHTPEQLRVLPSQSSQNVSPPLSPVDSSPPLSPMNKSPIHEIVASLRRLHLGKVNKSQPGSWTAHVGSPNNIVWSPRGSVLRPELFCLPTTPNGAPSRAGIGYLNLWEQECDEPAMERVESGRGLRVKMFERLLSNENCLERGDPDPSSSRPDLRWVSELVK 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4337825 4339318 + Conep07aG0075100.1 Cone7ag0724 441320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0724 398 ProSiteProfiles Zinc finger C3H1-type profile. 183 209 IPR000571 GO:0046872(InterPro)
Cone7ag0724 398 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 186 207 IPR000571 GO:0046872(InterPro)
Cone7ag0724 398 MobiDBLite consensus disorder prediction 246 272 - -
Cone7ag0724 398 PANTHER UNKEMPT FAMILY MEMBER 83 398 IPR045234 -
Cone7ag0724 398 SMART c3hfinal6 182 208 IPR000571 GO:0046872(InterPro)
Cone7ag0724 398 SMART c3hfinal6 217 240 IPR000571 GO:0046872(InterPro)
Cone7ag0724 398 FunFam Zinc finger CCCH domain-containing protein 66 140 208 - -
Cone7ag0724 398 Gene3D - 183 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1010 Cone-Chr4:8792079 Cone7ag0724 Cone-Chr7:4337825 9.63E-129 dispersed
Cone5ag0196 Cone-Chr5:813615 Cone7ag0724 Cone-Chr7:4337825 1.77E-52 dispersed
Cone5ag1074 Cone-Chr5:4765337 Cone7ag0724 Cone-Chr7:4337825 1.81E-57 dispersed
Cone7ag0724 Cone-Chr7:4337825 Cone7ag1305 Cone-Chr7:9597418 6.26E-93 dispersed
Cone4ag0778 Cone-Chr4:4585632 Cone7ag0724 Cone-Chr7:4337825 7.80E-214 wgd
Cone4ag1644 Cone-Chr4:12410916 Cone7ag0724 Cone-Chr7:4337825 4.32E-93 wgd
Cone7ag0724 Cone-Chr7:4337825 Cone7ag1137 Cone-Chr7:8577193 1.35E-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46494 PF07714 PK_Tyr_Ser-Thr 1.10E-30 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0724 - - - 0.0