Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0749 ATGGACGGCGAGGTGGGAGCCATGGAGGAGAAAGAGACTGAAGAGATTGGTTCGAGCTTGACGATGGAGAGAGTCGCTGCAGCCAAACAATTTATCGAGGGCCATTACAAGGCTCAGATGAAGCATTCTCAAGAACGCAGACAAAGGCGCTCCGTGCTGGAAAAGACGCTTGCCTCTTCAGATGTACCAAAAGAGGAACAAATTAATCTACTAAAGGATTTGGAGCGCAAAGAGACGGAGTACATGCGATTTAAAAGGCACAAAATATGTGTCGATGACTTTGACCTCTTAACGATTATCGGTCGAGGGGCCTTTGGAGAGGTTAGACTCTGCAGGGATAAGAAATCAGGCAACATTTATGCTATGAAAAAGTTGAAGAAATCTGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCGGAAAGGAATTTGCTTGCAGAAGTTGCCTCTCACTGCATTGTGAAACTCTATTTTTCATTTCAAGATGCTGAATACTTGTACCTGGTTATGGAGTATCTTCCAGGAGGGGACATTATGACTTTACTGATCAGAGAAGAAACATTGACTGAAACCGTGGCCAGATTTTACATTGCTCAAAGCGTTCTTGCCATAGACTCTATTCATAGACATAACTACATTCACAGAGACATAAAACCTGACAACCTTCTGCTGGACAAAACTGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCTCAAATTTATCCTCCATTACTGAACATGAAGTCCTTGATGACGAAAACTTAAATGACACAATGGATATTAATGAAGGCTGCCCAGATGCTAGAAATGGGAGGCGTTGGAAAAGCCCCCTCGAGCAACTGCAGCATTGGCAGATTAATAGAAGAAAATTGGCATTCTCCACGGTTGGCACTCCAGATTATATTGCTCCAGAAGTTTTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAGATGCTTATTGGCTATCCACCATTTTACTCTGATGATCCAGTAACAACATGCAGAAAGATTGTGCATTGGAGGAACCACTTGAAATTTCCCGATGAGGCAAGGTTGTCACCAGAAGCAAAGGATCTGATCTGTAGGCTCCTTTGTGATGTTGATGATAGACTTGGAAGAGGGGACCAAATAAAAGCTCATCCATGGTTCAAAGATATTGTGTGGGAGAAACTCTATGAAACGGAGGCAGCATTTAAGCCAGAGGTCAATGGGGAACTAGATACTCAGAATTTTATGAAATATGATGAGGTAGCTTTATATATATATATACTCATCTCTTATTAG 1332 42.42 MDGEVGAMEEKETEEIGSSLTMERVAAAKQFIEGHYKAQMKHSQERRQRRSVLEKTLASSDVPKEEQINLLKDLERKETEYMRFKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYFSFQDAEYLYLVMEYLPGGDIMTLLIREETLTETVARFYIAQSVLAIDSIHRHNYIHRDIKPDNLLLDKTGHMKLSDFGLCKPLDCSNLSSITEHEVLDDENLNDTMDINEGCPDARNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFYSDDPVTTCRKIVHWRNHLKFPDEARLSPEAKDLICRLLCDVDDRLGRGDQIKAHPWFKDIVWEKLYETEAAFKPEVNGELDTQNFMKYDEVALYIYILISY 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4583179 4587413 + Conep07aG0077700.1 Cone7ag0749 441345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0749 443 Gene3D Phosphorylase Kinase; domain 1 418 428 - -
Cone7ag0749 443 ProSiteProfiles AGC-kinase C-terminal domain profile. 400 443 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 Gene3D Transferase(Phosphotransferase) domain 1 300 417 - -
Cone7ag0749 443 FunFam Non-specific serine/threonine protein kinase 418 428 - -
Cone7ag0749 443 FunFam Non-specific serine/threonine protein kinase 178 245 - -
Cone7ag0749 443 Gene3D Transferase(Phosphotransferase) domain 1 178 243 - -
Cone7ag0749 443 SMART serkin_6 94 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 MobiDBLite consensus disorder prediction 1 18 - -
Cone7ag0749 443 Pfam Protein kinase domain 96 245 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 Pfam Protein kinase domain 294 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 ProSiteProfiles Protein kinase domain profile. 94 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 CDD STKc_NDR_like 92 435 - -
Cone7ag0749 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0749 443 CDD MobB_NDR_LATS-like 28 89 - -
Cone7ag0749 443 FunFam Non-specific serine/threonine protein kinase 300 417 - -
Cone7ag0749 443 MobiDBLite consensus disorder prediction 1 20 - -
Cone7ag0749 443 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 427 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone7ag0749 443 FunFam Non-specific serine/threonine protein kinase 55 177 - -
Cone7ag0749 443 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524(InterPro)
Cone7ag0749 443 Gene3D Phosphorylase Kinase; domain 1 92 177 - -
Cone7ag0749 443 SUPERFAMILY Protein kinase-like (PK-like) 77 434 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0749 Cone-Chr7:4583179 Cone7ag1274 Cone-Chr7:9450042 6.03E-262 dispersed
Cone4ag1678 Cone-Chr4:12544530 Cone7ag0749 Cone-Chr7:4583179 4.46E-261 wgd
Cone7ag0749 Cone-Chr7:4583179 Cone7ag1164 Cone-Chr7:8676600 4.33E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83023 PF00010 HLH 1.10E-09 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0749 K08790 - mdm:103400835 773.081