Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0750 | ATGAAGAAGGGATGCTTAAGGCCCAACAATCTCCACCTTAATCTCCCTCCACCGGATGATCTTTCCAAGTTCCTAACCAAAAGTGGCACGTTTGTGGAAGGAGATCTTCTTGTGAACAAAGATGGGGTTCGGATTCTCTCTCATGGTGAAACTGAATCTGTTCCACCTATTAAGCCAACAGATAACCAGTTGAGTTTAGAAGATATAGATAGGATTAAAGTCATTGGAAAAGGAAATGGTGGAATTGTTCAATTGGTTCGACATAAATGGACTGGCCAGTTTTTTGCATTGAAGGTAATTCAAATGAACATAGAGGAGTCTCACAGAAAACAAGTTGCAAAGGAACTGAAAATAAATCAATCGGCACAATGCCAATATATAGTGGTTTGTTATCAGTGTTTGTATTATGATGGCTCCATATATATAATTTTAGAGTACATGGATGGAGGATCTCTTTTAGACTTTCTCAAGAAAGTTAAGTCAATTCCTGAGCCTTATCTTGCTGCCATTTGCAAGCAGGTGTTGAAGGGCTTGTTGTACCTTCATCATGAAAAACATGTTATCCATAGAGATCTAAAACCTTCAAATCTGCTAATAAACCATAAAGGGGAGGTCAAGATTGCTGACTTTGGTGCTAGTGCGATACTGGAGAGCACATCAGGACAAGCCCATACTTTTCTTGGGACATGCAACTATATGTCTCCGGAGAGAATAAGGGCAAGCAAGTATGATAGCAAAAGCGATATATGGAGCTTAGGATTGGTAATGCTTGAATGTGCAACGGGTCGGTTTCCTTATTCTCCACCAGAGGAAGCTGAAGGATGGGTCAACGTCTTTGAGCTCATGGAGACCATTGAAGGTCAACCACCACCTTCTGCTCCTTCTGACCAATTCTCTACGGAATTCTGCTCATTTATTTCTGCATGTGTACAAAAGAACCCGTTTGAAAGACCGTCCGCGAGGGAACTCATGATGCATCCCTTCATTAACTTGTATGAAGATTTGGATATTGATCTCTCATCTTACTTCACCGATTCAGGATCTCCACTTGCTGTTTTTTAA | 1062 | 40.77 | MKKGCLRPNNLHLNLPPPDDLSKFLTKSGTFVEGDLLVNKDGVRILSHGETESVPPIKPTDNQLSLEDIDRIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMNIEESHRKQVAKELKINQSAQCQYIVVCYQCLYYDGSIYIILEYMDGGSLLDFLKKVKSIPEPYLAAICKQVLKGLLYLHHEKHVIHRDLKPSNLLINHKGEVKIADFGASAILESTSGQAHTFLGTCNYMSPERIRASKYDSKSDIWSLGLVMLECATGRFPYSPPEEAEGWVNVFELMETIEGQPPPSAPSDQFSTEFCSFISACVQKNPFERPSARELMMHPFINLYEDLDIDLSSYFTDSGSPLAVF | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4589460 | 4592693 | - | Conep07aG0077800.1 | Cone7ag0750 | 441346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0750 | 353 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0750 | 353 | Pfam | Protein kinase domain | 71 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 348 | - | - | |
Cone7ag0750 | 353 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 62 | 334 | IPR011009 | - | |
Cone7ag0750 | 353 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | FunFam | Mitogen-activated protein kinase kinase 6 | 39 | 148 | - | - | |
Cone7ag0750 | 353 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 40 | 345 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cone7ag0750 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 181 | 199 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 144 | 157 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 247 | 269 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | FunFam | Mitogen-activated protein kinase kinase 6 | 150 | 348 | - | - | |
Cone7ag0750 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0750 | 353 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Cone7ag0750 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone7ag0750 | Cone-Chr7:4589460 | Cone7ag1164 | Cone-Chr7:8676600 | 2.75E-145 | dispersed | |
Cone4ag0048 | Cone-Chr4:242138 | Cone7ag0750 | Cone-Chr7:4589460 | 1.23E-190 | wgd | |
Cone7ag0046 | Cone-Chr7:199505 | Cone7ag0750 | Cone-Chr7:4589460 | 4.29E-191 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83024 | PF02297 | COX6B | 3.60E-18 | CL0351 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0750 | K20603 | - | cit:102625262 | 545.428 |