Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0750 ATGAAGAAGGGATGCTTAAGGCCCAACAATCTCCACCTTAATCTCCCTCCACCGGATGATCTTTCCAAGTTCCTAACCAAAAGTGGCACGTTTGTGGAAGGAGATCTTCTTGTGAACAAAGATGGGGTTCGGATTCTCTCTCATGGTGAAACTGAATCTGTTCCACCTATTAAGCCAACAGATAACCAGTTGAGTTTAGAAGATATAGATAGGATTAAAGTCATTGGAAAAGGAAATGGTGGAATTGTTCAATTGGTTCGACATAAATGGACTGGCCAGTTTTTTGCATTGAAGGTAATTCAAATGAACATAGAGGAGTCTCACAGAAAACAAGTTGCAAAGGAACTGAAAATAAATCAATCGGCACAATGCCAATATATAGTGGTTTGTTATCAGTGTTTGTATTATGATGGCTCCATATATATAATTTTAGAGTACATGGATGGAGGATCTCTTTTAGACTTTCTCAAGAAAGTTAAGTCAATTCCTGAGCCTTATCTTGCTGCCATTTGCAAGCAGGTGTTGAAGGGCTTGTTGTACCTTCATCATGAAAAACATGTTATCCATAGAGATCTAAAACCTTCAAATCTGCTAATAAACCATAAAGGGGAGGTCAAGATTGCTGACTTTGGTGCTAGTGCGATACTGGAGAGCACATCAGGACAAGCCCATACTTTTCTTGGGACATGCAACTATATGTCTCCGGAGAGAATAAGGGCAAGCAAGTATGATAGCAAAAGCGATATATGGAGCTTAGGATTGGTAATGCTTGAATGTGCAACGGGTCGGTTTCCTTATTCTCCACCAGAGGAAGCTGAAGGATGGGTCAACGTCTTTGAGCTCATGGAGACCATTGAAGGTCAACCACCACCTTCTGCTCCTTCTGACCAATTCTCTACGGAATTCTGCTCATTTATTTCTGCATGTGTACAAAAGAACCCGTTTGAAAGACCGTCCGCGAGGGAACTCATGATGCATCCCTTCATTAACTTGTATGAAGATTTGGATATTGATCTCTCATCTTACTTCACCGATTCAGGATCTCCACTTGCTGTTTTTTAA 1062 40.77 MKKGCLRPNNLHLNLPPPDDLSKFLTKSGTFVEGDLLVNKDGVRILSHGETESVPPIKPTDNQLSLEDIDRIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMNIEESHRKQVAKELKINQSAQCQYIVVCYQCLYYDGSIYIILEYMDGGSLLDFLKKVKSIPEPYLAAICKQVLKGLLYLHHEKHVIHRDLKPSNLLINHKGEVKIADFGASAILESTSGQAHTFLGTCNYMSPERIRASKYDSKSDIWSLGLVMLECATGRFPYSPPEEAEGWVNVFELMETIEGQPPPSAPSDQFSTEFCSFISACVQKNPFERPSARELMMHPFINLYEDLDIDLSSYFTDSGSPLAVF 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4589460 4592693 - Conep07aG0077800.1 Cone7ag0750 441346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0750 353 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Cone7ag0750 353 Pfam Protein kinase domain 71 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 Gene3D Transferase(Phosphotransferase) domain 1 149 348 - -
Cone7ag0750 353 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 SUPERFAMILY Protein kinase-like (PK-like) 62 334 IPR011009 -
Cone7ag0750 353 SMART serkin_6 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 FunFam Mitogen-activated protein kinase kinase 6 39 148 - -
Cone7ag0750 353 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 40 345 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone7ag0750 353 PRINTS Tyrosine kinase catalytic domain signature 181 199 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 PRINTS Tyrosine kinase catalytic domain signature 144 157 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 FunFam Mitogen-activated protein kinase kinase 6 150 348 - -
Cone7ag0750 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0750 353 CDD PKc_MAPKK_plant_like 67 333 - -
Cone7ag0750 353 Gene3D Phosphorylase Kinase; domain 1 47 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0750 Cone-Chr7:4589460 Cone7ag1164 Cone-Chr7:8676600 2.75E-145 dispersed
Cone4ag0048 Cone-Chr4:242138 Cone7ag0750 Cone-Chr7:4589460 1.23E-190 wgd
Cone7ag0046 Cone-Chr7:199505 Cone7ag0750 Cone-Chr7:4589460 4.29E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83024 PF02297 COX6B 3.60E-18 CL0351 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0750 K20603 - cit:102625262 545.428