Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0757 ATGGCAGTTCCCAATTTCGCCAAAACTGATTCAAACCTCTTCTGTCAATCAGGAAACTCATCCGGGTCAATCCCATTTCACTGGAACAAGGCTGCAAAATCCCTCCAATCCAACCATTTTGAAGAAGTTCTAAACATGGTGTCACAATTTGAACAAGCACAAATTGTTGAAATCCAAGGCACCACCTTGACTGTTGCACAAGTAACTGCTATCGCTCGTAGATCCGAAGTCAAAGTCAACCTTGATGCAACCACGGCCCACAATCGGGTGGCCCAAAGTGCCAATTGGGTCACCCTTAACATCTCACGTGGGACCGACACTTATGGTGTAACTACTGGGTTCGGGTCCACCTCCCACCGCCGGACCAACAAAACCTCCGACCTCCAAACCGAACTCATCCGTTTCCTCAATGTCGGAGTCATCGGAAAAGACCATCTCCCAGCCACTTATTCCAAAGCCGCTATGCTTGTTCGAACAAACACTTTGATGCAAGGCTACTCAGGTATTAGATGGGAGTTGCTCGAAGCATTGGCTAAGCTTATGAACGAAAATTTGATACCGAAATTGCCCTTGAGAGGGACGATCACCGCTTCTGGTGATCTCGTCCCATTGTCTTACATTGCCGGGGTTATAACCGGAAGACATAATTCTAAGGTTGTGACTCTTCAAGGCGAAGAGATTTCCGCTCTCGAGGCTATTAAAAGAGCTAAAATTCCGGGCCCTTTTGAGCTACAAGCCAAAGAAGGCCTAGCTCTTGTCAACGGCACGGCTGTGGGGTCAGCTGTGGCTGCAACAGTTTGTTTCGACGCCAATATTTTAGCTTTACTTGCTGAAATACTTTCGGCTTTGTTTTGTGAAGTGATGCAAGGAAAACCCGAGTTTACAGACCCTCTAACTCACAAGCTTAAGCATCACCCAGGCCAGATTGAATCGGCTGCAATCATGGAGTTCCTTTTGGATCAAAGTGATTACATGAGAGAAGCCAAGCTTAGACACGAGAAAGACCCGTTAACTAAACCAAAACAAGACCGTTATGCCCTTCGAACTTCTCCACAGTGGCTCGGTCCTCAGATCGAAGTGATTCGTATGGCAACTCATTCGATCGAAAGAGAGATCAATTCTGTCAATGATAACCCAATAATTGATGTTGCTCGGGATCTTGCACTCCATGGTGGGAATTTCCAAGGCACACCAATTGGCGTCTCCATGGACAATGTCAGAATCGCAATTGCAGCCATTGGAAAGCTTATGTTTGCTCAGTTTTCAGAACTTGTATGCGACTATTACAATAATGGGCTGCCTTCGAATCTTAGCGGTGGGCCCAATCTGAGCTTGGATTACGGGTTCAAAGGGGCCGAGATAGCCATGGCTGCATATTGTTCTGAACTTCAATACTTAGCAAACCCGGTTACAACTCATGTTCAAAGTGCGGAGCAACACAACCAGGATGTGAACTCATTGGGATTGATTTCGGCTCGAAAAAGTGCAGAAGCTGTAGAGATTCTCAAGCTCATGGCGGCAACTTTCATGGTGGGGCTTTGCCAAGCAATTGACTTGAGACATTTGGAAGAGAATATGAGAGAGGTGGTTAAACATGTTGTCCTTCAAGTTGTGAGGAAGACTCTTTATGCAGCTGAAGATGGGTCCATGTTGGAATCTAGGTTTTGTGAGAAAGAACTCTTACAAATTATTGAACATCAGCCTGTTTTTTCTTACATTGATGATCCTACTAATCCGTCCTATGCTCTTTTGTCGAAACTGAGAGAAGTGCTAGTGGAAAGAGCATTGAAGGATCCAAAACTAGACGACAGTAGTAACGGTAAAGGATATTCTGTTTTCAAACGGATTCCGATTTTTATGGACGAATTGAAACCGACACTAGAAGAAGAGGTGGAGAAGGCAAGAAAGAGATTTGATGATGGAGAGTTTTTTCTGGAAAATAGGATCAAGAAATGTAGGACTTATCCGATCTATCGGTTTGTGAGGGATGAACTCGAAACTGAATTACTTAGCGGGTCGAAGAAAGTGAGCCCGGGAGAGGATATAGAGAAGGTGTTTGAGGCCATTAATGGAGGTAGACTCGGAGAAGTTGTGAAAAAATGTTTAGTAGATTTGAAGGGACCACCTCAGTCCTTTCGATGA 2142 44.91 MAVPNFAKTDSNLFCQSGNSSGSIPFHWNKAAKSLQSNHFEEVLNMVSQFEQAQIVEIQGTTLTVAQVTAIARRSEVKVNLDATTAHNRVAQSANWVTLNISRGTDTYGVTTGFGSTSHRRTNKTSDLQTELIRFLNVGVIGKDHLPATYSKAAMLVRTNTLMQGYSGIRWELLEALAKLMNENLIPKLPLRGTITASGDLVPLSYIAGVITGRHNSKVVTLQGEEISALEAIKRAKIPGPFELQAKEGLALVNGTAVGSAVAATVCFDANILALLAEILSALFCEVMQGKPEFTDPLTHKLKHHPGQIESAAIMEFLLDQSDYMREAKLRHEKDPLTKPKQDRYALRTSPQWLGPQIEVIRMATHSIEREINSVNDNPIIDVARDLALHGGNFQGTPIGVSMDNVRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNLSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAVEILKLMAATFMVGLCQAIDLRHLEENMREVVKHVVLQVVRKTLYAAEDGSMLESRFCEKELLQIIEHQPVFSYIDDPTNPSYALLSKLREVLVERALKDPKLDDSSNGKGYSVFKRIPIFMDELKPTLEEEVEKARKRFDDGEFFLENRIKKCRTYPIYRFVRDELETELLSGSKKVSPGEDIEKVFEAINGGRLGEVVKKCLVDLKGPPQSFR 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4676806 4679170 - Conep07aG0078500.1 Cone7ag0757 441353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0757 713 NCBIfam phenylalanine ammonia-lyase 26 702 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cone7ag0757 713 PANTHER HISTIDINE AMMONIA-LYASE 24 710 IPR001106 GO:0016841(PANTHER)
Cone7ag0757 713 Gene3D - 16 256 IPR024083 -
Cone7ag0757 713 Gene3D Fumarase/aspartase (Central domain) 257 706 - -
Cone7ag0757 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841(InterPro)
Cone7ag0757 713 CDD PAL-HAL 61 520 IPR001106 -
Cone7ag0757 713 SUPERFAMILY L-aspartase-like 25 711 IPR008948 GO:0003824(InterPro)
Cone7ag0757 713 Gene3D - 523 647 IPR023144 -
Cone7ag0757 713 Pfam Aromatic amino acid lyase 63 531 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1308 Cone-Chr11:9664209 Cone7ag0757 Cone-Chr7:4676806 9.40E-88 dispersed
Cone19ag1247 Cone-Chr19:8569861 Cone7ag0757 Cone-Chr7:4676806 7.33E-297 dispersed
Cone1ag1357 Cone-Chr1:56574402 Cone7ag0757 Cone-Chr7:4676806 6.15E-291 dispersed
Cone5ag0346 Cone-Chr5:1476230 Cone7ag0757 Cone-Chr7:4676806 4.80E-293 dispersed
Cone7ag0757 Cone-Chr7:4676806 Cone13ag1260 Cone-Chr13:9546345 2.47E-295 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0757 K10775 - rcu:8272515 1102.81