Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0764 ATGCAGCCTCTCTTCTTCTACTACTTTCTCTTCTTAATCTTCTCATCAAGCAAAAGCATCAAGGCTACTACAACTCTTACTCTCAGCCGTCGGATCCTCCACCAGCCATTCTCCCCACTCGAATCTCTCCCTCCATCTCCACCCCCTCCTTCTCCTCCTCCTCCTCCTCCTCATACTCCTAAATATCCTCTCTCCTCAGATTCCCCTTCTACCCCTGACCCATCTCCATTTTTCCCATCCTACCCAGCTCCTCCTCCTCCGCCCCCTTCCCCCGCCTCCTTCGCCTCCTTTCCGGCCAACATCTCCTCCCTCATCCTCCCTCACTCCTCTAAATCCTCTTCCACTTCTAAAAAGATCGTCCCCTTAGCCATTGCCGCCGTTCTCTCCGCCATCGTAGTTGTCACCGTCGTTTCCTTCCTCTACTTCCGCCGGAGAAGACAGAATCAGGCCTTGGCCAACGACAAGACGTCCAGATCTGACCGCAGCAGCAGGTTATTCCACTCTGCCAATGTTGAATCTACAATTAATGGAAATGGAGGAATACCTCCTATTCCTAAGCTCAGAAATCCATCTGCCTCTAGCACTGAATTTCTCTACCTAGGAACTTTGGTCAGTTCTAGAGGAACCGATGATCGCTTGGGTTCACGTCGAAATGACGGCGGAGGCGGTGGTGGTCGGAGTAGTAGTTCTGCTAGCAGGAAAATGGACTCGCCGGAGCTCCACCCGCTTCCGCCGCTGCTCGGTAGTCAGAGTGTGAGACAGAAGCGAGGTAATGGAGGAGATATGAGTATGAGTTCGACCGGAGAAGATGAAGAGGAGGAGGAGTTCTACTCGCCGAAAGGCTCCCTGAGCGGAACTGGATCGGGATCTAGGAGATTTTTCGCAGCGGTGGCAACAAAGGCGGCTGCTCTGGATAATAATAAGAGCAGTAGCGAGTCGAGCAGTTGCTCTTCGCATTCAACTTCGTGCTGCTCTGCTTCTTCTCCGGCTAGGTCAGGTAGCTTGAGCCCAACTACAAAAACAAGATCTAAAAATAAATCACCTGATGAGGAAGTTGATACTAGTGTGAAAGAAGCAGCACCAGATTTAAATATCGAAGAGCTATGCTCTTCTTCTTTTTGTTCAGATAATCATCATCTTCCTTCTTCTTCGCCCACTAGAATATCCAACTTTTCAGATCCACCTATTCCAGATCAACCGGACGTCATCCAAGAACAGCCTGTTCAACTTCCTCCGCCGCCACCACCACTGCCGCCAACAAGGTACTGGAGAACTCCATTGTCGACCTTCAAGCCAGTATCAAGGCTGCCTGGTCTTAGACCTCTTTTGACTCCAAGGCCAGTTGCTCTTGAAAATGAGATGAAAGTATCTTCTTCCATGGATGAGTTGCCATCATGCAGTACTACTCCTCCTTCTAACCCTGTTGAGAATTCAGAGGATACTCCTAAGCCCAAGTTGAAGCCCTTACATTGGGACAAGGTTAGAGCCAGCTCTGATAGGGAAATGGTGTGGGATCAACTTCGATCAAGCTCATTCAAATTGAATGAGGAAATGATTGAAACCTTATTTATTGCAAACACCTCCAATTCGAAACCAAAGGACACAACCCCTCGATCAGTCCTCCTTCCATTACCAACGCAAGAGGGTAGAATTTTAGATCCCAAAAAGTCTCAAAATATTGCAATCTCTCTAAGGGCACTCAATGTAACTGTAGAGGAAGTAAGAGAAGCCCTTTTAGAAGGCAATGCGGATGTACTTGGTACAGAGCTACTTGAGAATCTATTGAAGATGGCTCCAAGCAAAGAAGAAGAAGGCAAGTTGAAGGAATATTCGGAAAATAATTCACCATTGAAGCTTAGTTCGGCCGAGAAATTTCTTAAGGCGATGATGGAAGTACCTTTTGCATTTAAAAGGCTGGAAGTGATGCTATACATGGCGAATTTCGAGTCGGAGGTTGAGTACCTCAAAATGTCTTTCTACACTTTAGAGGCTGCATGTGAAGAATTGAGGAACAGCAAAATGTTCTTGAAGCTTCTAGAAGCTGTGCTCAAAACTGGAAACCGAATGAACGTTGGGACCAATCGTGGAGATGCCCATGCCTTCAAGCTCGACACTCTTCTCAAGCTAGTTGACGTCAGGGGCGCGGACGGAAAAACCACGCTCCTACATTTTGTTGTACAAGAAATTATAAGAACCGAAGGGGCCCGCCTGTCTTCTACTTCAAACCAAATTACACAAAACCCCACCTTGAGTGAAGAAGTCAGGTGTAGGAAACTTGGCCTACAAGTAATATCCGGTATAAGTTCTGAACTCACCAATGTGAAGAAAGCGGCTGCAATGGATTCAGTTGTTCTTGCCAAAGATGTGTCCAAGCTTTCTCAAGGAATAGAGGAGATAAGGAAAGTTGTGGAATTAAATGTGGAGGGATTGAATGAAGGAAGTGACGATAAATTTTTAGCATCGGCTAAAAGGTTTATGGAAACGGCAGAGGAGGAACTGATTAAAACTCAAGCTCATGAGAGTGTTGCTCTGTCTCTAGTGAAGGAGATAACAGAGTACTTTCATGGGAATTCGGCTAAAGAAGAGGCTCACCCATTGCGAATATTCATGGTGGTGCGGGATTTTCTTGCCATTCTTGATGGGGTTTGTAAGGAGGTAGGGCTGATTAATGAGAGAACTGTTGTTAGCTCTGCTTGTAAATTTCCAGTTCCGGTTAATCCCACATTGCACCATTTTAATGGGTTTCCGGCCAGGCAGAACAGTTTTTCTGAAGATGAGAGTGAGTAA 2787 46.57 MQPLFFYYFLFLIFSSSKSIKATTTLTLSRRILHQPFSPLESLPPSPPPPSPPPPPPHTPKYPLSSDSPSTPDPSPFFPSYPAPPPPPPSPASFASFPANISSLILPHSSKSSSTSKKIVPLAIAAVLSAIVVVTVVSFLYFRRRRQNQALANDKTSRSDRSSRLFHSANVESTINGNGGIPPIPKLRNPSASSTEFLYLGTLVSSRGTDDRLGSRRNDGGGGGGRSSSSASRKMDSPELHPLPPLLGSQSVRQKRGNGGDMSMSSTGEDEEEEEFYSPKGSLSGTGSGSRRFFAAVATKAAALDNNKSSSESSSCSSHSTSCCSASSPARSGSLSPTTKTRSKNKSPDEEVDTSVKEAAPDLNIEELCSSSFCSDNHHLPSSSPTRISNFSDPPIPDQPDVIQEQPVQLPPPPPPLPPTRYWRTPLSTFKPVSRLPGLRPLLTPRPVALENEMKVSSSMDELPSCSTTPPSNPVENSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFIANTSNSKPKDTTPRSVLLPLPTQEGRILDPKKSQNIAISLRALNVTVEEVREALLEGNADVLGTELLENLLKMAPSKEEEGKLKEYSENNSPLKLSSAEKFLKAMMEVPFAFKRLEVMLYMANFESEVEYLKMSFYTLEAACEELRNSKMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVRGADGKTTLLHFVVQEIIRTEGARLSSTSNQITQNPTLSEEVRCRKLGLQVISGISSELTNVKKAAAMDSVVLAKDVSKLSQGIEEIRKVVELNVEGLNEGSDDKFLASAKRFMETAEEELIKTQAHESVALSLVKEITEYFHGNSAKEEAHPLRIFMVVRDFLAILDGVCKEVGLINERTVVSSACKFPVPVNPTLHHFNGFPARQNSFSEDESE 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4752804 4756500 - Conep07aG0079200.1 Cone7ag0764 441360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0764 928 MobiDBLite consensus disorder prediction 455 487 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 40 89 - -
Cone7ag0764 928 PANTHER FORMIN-RELATED 74 925 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone7ag0764 928 Gene3D Formin, FH2 domain 475 888 IPR042201 -
Cone7ag0764 928 Pfam Formin Homology 2 Domain 478 879 IPR015425 -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 376 393 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 343 357 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 303 361 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 39 89 - -
Cone7ag0764 928 SUPERFAMILY Formin homology 2 domain (FH2 domain) 411 891 - -
Cone7ag0764 928 ProSiteProfiles Formin homology-2 (FH2) domain profile. 476 905 IPR015425 -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 458 479 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 163 177 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 150 188 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 303 342 - -
Cone7ag0764 928 SMART it6_source 476 894 IPR015425 -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 376 418 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 208 289 - -
Cone7ag0764 928 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0400 Cone-Chr19:3372812 Cone7ag0764 Cone-Chr7:4752804 7.19E-193 dispersed
Cone6ag0090 Cone-Chr6:438757 Cone7ag0764 Cone-Chr7:4752804 2.10E-112 dispersed
Cone6ag1454 Cone-Chr6:11632679 Cone7ag0764 Cone-Chr7:4752804 1.19E-155 dispersed
Cone7ag0764 Cone-Chr7:4752804 Cone9ag1375 Cone-Chr9:10297335 4.51E-150 dispersed
Cone4ag0812 Cone-Chr4:5157281 Cone7ag0764 Cone-Chr7:4752804 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0764 K28090 - vvi:100252716 691.804