Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0765 ATGCATATATATACACATGGTTCCGTTACTGTTAACTGGTTGCAGCAGCTCAATCTAGACCTAATGGAAGGTGGTAGAAGCGTGGCGCTGGAAACAAACGATGTAGTTCTGCAGATTGTTGCGACCAATGCAACAGTGGCGGCAGTGGCTGCAAGTAATGTGTCCTCCGCGGATTCAGAACCTGCTGCCATAGTCGGAGAAGGATCCTACTCATTCGCCCATAGTTCTCAAGCTGGGGCTAAACATCCAAACCTCGACCTTACAGATTCTATCAAAGCGAGTTCTCCTTCTCCGGATTTTAACTTAGCGAGTCCGACTCCGAATAAGCCTCCGAAATTTCCTACTGAGTCCATAACTAGCCGCAGGCTGCTTTCTCGATCATCATTTTCGAAGCCAAAATCGAGGTTAGTGGAGTCTCCATATCCTGGCAACTCGATTTTGGCTGAAGAAAAGGCGAAGACCAAGTCTAATTCAGGTTCACCTTACTGGAATTCTCCAAAGTTAGCTTCTCCTACAAGCAGAGTTACAGTTTCTACTCCCAAAGAAGCTTTGAGATCGGCTCCTATAACCCCTAGAACGCCGCTGATTGGATCCCCTTTGCTTGATGAAGAAGACGATGAGGAAGTGTACAAAACTGCAGATCTTAAAGTGAAAGAAATTACAGGCAAGAAGTTGAAGAAGGGGTTTTATATTGAATGGATTGCATTTGTTTGCATAATGGCGTGTTTGGTTTCTAGCTTAACTGTAAACAAGGTTGAAGAAAGGGAGATTTGGGGATTGAAAATATGGAGATGGTGTGTCTTGGTATTAGTAATTTTCTGTGGCAGATTGTTTTCCATGTGGTTTATTAACTGTCTTGTTTTCTTGATTGAAAGGAACTTTTTGCTTAAGAAGAAGGTTCTGTATTTCGTTTATGGGTTGAGGAAGAGTGTTATAGTTTTCATGTGGTTAGCTTTGGTTCTTTTAGCATGGGGTCTGTTATTTGATCATAGTAGTAGTAACAGGTCGAAGAAAACAACCAATATCTTGAATCACATCACTAGGTGTCTTGCTTCATTAATTATTGGGGCAGCAATATGGCTAGTGAAGACATTGTTAGTGAAGTTATTGGCTTCTTCTTTTCAGTGTACGAGATTCTTTGATAGGATTCAAGAGTCTATCTTTCATCAGTATGTGCTTCGGACCCTTTCGGGTCCTCCATTGGTAGAGATGGCAGAGAAGTTTGGGAGGACAGCAAGTACAGGGCAGTTGAGCTTTAGGAATCTGAAAAAGGAAAATAATGATGGGAAAGAAGGCAAAGAGGAGGTGATTGATGTAGACAAGCTTCAGAAAATGAAGCAAGGAAAGGTCTCTGCTTGGACCATGAAAGGGCTAGTTGATGTGATAAGGAGTTCGGGATTGTCTACGATCTCTAATACACTAGAGAATTTTGACGATGAGGAGGGAGATAAGGAGATTACTAGTGAATGGGAAGCAAAGGCTGCAGCTTATCGAGTTTTTAGAAATGTTGCTAAGCCTGGTAGCAAGCATATCGATGAGGAAGACCTATTGCGCTTTATGAAAAAGGAGGAGCTGGATAATGTGCTTCCATTATTTGAAGGAGCTGTTGAGTCGGGGAAGATCATGCGGAAATCCTTAAAAAACTGGATAGTGAACGTTTATCTTGAACGAAAATCACTGGCACACTCCTTAAATGATACCAAAACAGCAATAGAGGAGCTGAACCGGCTTGGTTCAGCAGTAGTTCTTATTTTGGCTATCATTATATGGTTATGTTTAATGGGATGGCTCACCACCCAAATACTTCTCTTCATATCATCTCAGCTTTTACTTGTGGTTTTTGTGTTTGGAAATACGGCGAAAACTGTATTTGAAGCCATCATCTTTGTGTTCGTTATGCACCCGTTTGATGTAGGGGACCGTTGTGTTATAGATGGAGTGCAGATGGTGGTTGAAGAGATGAATATATTGACTACAGTTTTCTTGAGATATGACAATGAGAAAATTTTCTATCCGAATTCGGTTCTGGCTACCAAACCCATTAGCAATTTTTACAGGAGCCCAGAAATGAGCGATTCTGTTGAATTTGCTGTTGATGTTTCTACATCAATTGAGGTTATAGGAGTTCTTAAATCTAAGATAAAAGGTTACTTGGAGAGCAAGCCACAACACTGGCGTCCGGGGCATAGTGTACAGGTTAAAGAGATAGAGGAAGTGAACAAGATGAAAATGGGTCTCTATGTTACTCACACCATTAACTTTCAGAATTACGGCGATAAGAGCAGCCGCAGATCCGAACTAGTCTTAGAACTTAAGAGAATTTTCGAGGAGCTTGGAATCAAATATCATCTGCTACCCCAAGAAGTTTTTGTCACTCATCTCAATTCAGTTCCTCCTGGAGTCTTAAATCCACGGCGATGA 2421 41.51 MHIYTHGSVTVNWLQQLNLDLMEGGRSVALETNDVVLQIVATNATVAAVAASNVSSADSEPAAIVGEGSYSFAHSSQAGAKHPNLDLTDSIKASSPSPDFNLASPTPNKPPKFPTESITSRRLLSRSSFSKPKSRLVESPYPGNSILAEEKAKTKSNSGSPYWNSPKLASPTSRVTVSTPKEALRSAPITPRTPLIGSPLLDEEDDEEVYKTADLKVKEITGKKLKKGFYIEWIAFVCIMACLVSSLTVNKVEEREIWGLKIWRWCVLVLVIFCGRLFSMWFINCLVFLIERNFLLKKKVLYFVYGLRKSVIVFMWLALVLLAWGLLFDHSSSNRSKKTTNILNHITRCLASLIIGAAIWLVKTLLVKLLASSFQCTRFFDRIQESIFHQYVLRTLSGPPLVEMAEKFGRTASTGQLSFRNLKKENNDGKEGKEEVIDVDKLQKMKQGKVSAWTMKGLVDVIRSSGLSTISNTLENFDDEEGDKEITSEWEAKAAAYRVFRNVAKPGSKHIDEEDLLRFMKKEELDNVLPLFEGAVESGKIMRKSLKNWIVNVYLERKSLAHSLNDTKTAIEELNRLGSAVVLILAIIIWLCLMGWLTTQILLFISSQLLLVVFVFGNTAKTVFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDSVEFAVDVSTSIEVIGVLKSKIKGYLESKPQHWRPGHSVQVKEIEEVNKMKMGLYVTHTINFQNYGDKSSRRSELVLELKRIFEELGIKYHLLPQEVFVTHLNSVPPGVLNPRR 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4764957 4768860 + Conep07aG0079300.1 Cone7ag0765 441361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0765 806 Gene3D - 635 684 IPR023408 -
Cone7ag0765 806 MobiDBLite consensus disorder prediction 150 175 - -
Cone7ag0765 806 SUPERFAMILY Sm-like ribonucleoproteins 625 684 IPR010920 -
Cone7ag0765 806 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 102 797 IPR016688 GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)|GO:0050982(PANTHER)
Cone7ag0765 806 MobiDBLite consensus disorder prediction 75 175 - -
Cone7ag0765 806 Pfam Mechanosensitive ion channel, beta-domain 628 684 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone7ag0765 806 PIRSF Memb_At2g17000 29 806 IPR016688 -
Cone7ag0765 806 FunFam Predicted mechanosensitive ion channel 635 684 - -
Cone7ag0765 806 MobiDBLite consensus disorder prediction 113 134 - -
Cone7ag0765 806 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1250 Cone-Chr12:9639328 Cone7ag0765 Cone-Chr7:4764957 2.81E-182 dispersed
Cone14ag0261 Cone-Chr14:1198418 Cone7ag0765 Cone-Chr7:4764957 1.20E-205 dispersed
Cone15ag0280 Cone-Chr15:1304750 Cone7ag0765 Cone-Chr7:4764957 8.83E-211 dispersed
Cone7ag0765 Cone-Chr7:4764957 Cone8ag1305 Cone-Chr8:10642036 4.94E-171 dispersed
Cone4ag0813 Cone-Chr4:5172087 Cone7ag0765 Cone-Chr7:4764957 0 wgd
Cone4ag1693 Cone-Chr4:12597498 Cone7ag0765 Cone-Chr7:4764957 7.44E-219 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0765 K22048 - csv:101209209 1027.31