Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0796 ATGGCCACCATGGCCAGCTCTATTATTGGTCCATCACCTTTGCTTCTAGCTTTCTTCATATTTTCAAACGTCGTGGTTTCCTCAAAGGTTGCAGCTCTTAATCCAGACTCCCAGGCCCAAGCCCTTCTCAACTTCAAGGATTCCCTCAAAAACAATAGTAAGCTGTCTAGTTGGAATTCATCTATTTCCCCATGCTCCTTGGACGTAAGCAAGCCAAACTGGGTTGGCGTTCTTTGCACTGCGAAGGGAACAATTTGGGCTTTACAACTTGAAAATATGGGACTCAATGGCAGCCCTGACATGACGATGCTTACAGGGTTGAAAGAATTAAGAAGTATTAGCTTAATGAATAATAGTTTTGATGGTTCATGGCCAGATATAAGGAAATTGAGTGCCTTAAAAACGTTATACTTGTCATATAATAAGTTTCAAGGAGAGATTCCAGGGGATACTTTCACCGAAATGAAGTACCTTAAGAAATTGCATTTAGCAGAAAATCAGTTCAGAGGAGAGATTCCTCGGTCGTTGTTGGATTTGCATAGGCTTCTGGAATTGAGACTTGAAGGGAACAGATTCACAGGCGCAATACCAAAATTTGACGGTAGTATATTGACGTCATTTAACGTTTCCAATAATGCGTTACAAGGAGAGGTACCACAGGGTTTGAGTAAGATGAATGTCAGCGCCTTTACTGGAAATGAAGGATTGTGTGGAGGGCTCTTAAGTAAATCATGTAACGAGGAACGTCGTCCTGCAGATCCACCATCCAAGAAGCTCTCAGTTGCGATCATGGTCATAATTTCAATATCTTCTGTTGTGATAGTATTCAGCATCACAGCAGGGACTTTAATCTGTAACCGGCAGAAGAAAACAATTCCAATCTCCATAGAGGCTTCACCACAGACCCTAGGAACCAAACCGGCAAGCGGTCACAAGAGCTCAGCGGACCAACCATCAGCTGCAGGCAGAATCTCGCCTCATGACTCTGACGGATGTGATGCCGCAAGTGATAAAAAATCTGATAATGGGAAAGTATCATTTGTGAGGGATGACAGAGAGCGGTTTGATTTGCCAGATTTGATGAGAGCTTCGGCAGAGGTGATGGGTAGTGGGTGCTTTGGGGCGTCTTATAAAGCAGCTTTGCCGAGTGGAGCAGCCATGGTTGTGAAGAGGTATAAGCAAATGAACAACGTGAGTAAAGAGGAGTTCCATGAACATATGCAAAGGGTTGGGAGATTGAGAAATAATAACTTGCTTCCACTTGTGGCTTTTTACTATAAAAACGACGATAAGCTCTTGATTTCTGACTTCGTGCAAAGGGGAAGCCTCTCTGTCCACCTTCATGGGCGCAAAGAACGTCTGGGTTGGCCAACTAGGTTGAAAATTGTGAAAGGTATTGCACGAGGTCTGCAATATCTCTACAAGGAACTCCCAAGCTTAATTGCACCACACGGACACCTCAAATCCTCTAATGTTCTCCTTAACGAAAGCTTTGAGCCCTTTCTCGCTGATTATGCTCTCATCCCTGTCGTCAACAAAGGGGAGGCTCAAAATCTCTTGGTTGCCTACAAATCACCTGAGTACTTGCACAATGGTAGGATTACAAAGAAAACAGACGTTTGGAGTCTGGGGTTACTGATTTTAGAAATAGTTACTGGAAAGATCCCTGCCATGTTTCGTCAACAAGGAAGGGCGACTGATGAGGAGGGTTTGGCCAGTTGGGTCAATTCCATTCCTGAAGAAAAGTGGATGATTCTAGTGTTTGATAAAGAAATGGGGGGAATTAAGAACTGTGAAAGGGAGATAGTGAAGCTTTTGAAGATTGCCATGGCTTGTTGTGAAGCTGATGTCGAGAAAAGATCGGGATTCAGAGAAGCCGTTGAAGGGATTGAAGAATTGAAAGAACGAGAGCATGGTGAGGATGATTTCTACTCTTCTTATGCCATGACATCAGATTTTTGA 1962 43.53 MATMASSIIGPSPLLLAFFIFSNVVVSSKVAALNPDSQAQALLNFKDSLKNNSKLSSWNSSISPCSLDVSKPNWVGVLCTAKGTIWALQLENMGLNGSPDMTMLTGLKELRSISLMNNSFDGSWPDIRKLSALKTLYLSYNKFQGEIPGDTFTEMKYLKKLHLAENQFRGEIPRSLLDLHRLLELRLEGNRFTGAIPKFDGSILTSFNVSNNALQGEVPQGLSKMNVSAFTGNEGLCGGLLSKSCNEERRPADPPSKKLSVAIMVIISISSVVIVFSITAGTLICNRQKKTIPISIEASPQTLGTKPASGHKSSADQPSAAGRISPHDSDGCDAASDKKSDNGKVSFVRDDRERFDLPDLMRASAEVMGSGCFGASYKAALPSGAAMVVKRYKQMNNVSKEEFHEHMQRVGRLRNNNLLPLVAFYYKNDDKLLISDFVQRGSLSVHLHGRKERLGWPTRLKIVKGIARGLQYLYKELPSLIAPHGHLKSSNVLLNESFEPFLADYALIPVVNKGEAQNLLVAYKSPEYLHNGRITKKTDVWSLGLLILEIVTGKIPAMFRQQGRATDEEGLASWVNSIPEEKWMILVFDKEMGGIKNCEREIVKLLKIAMACCEADVEKRSGFREAVEGIEELKEREHGEDDFYSSYAMTSDF 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5641062 5643197 + Conep07aG0082400.1 Cone7ag0796 441392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0796 653 FunFam Nuclear pore complex protein NUP107 35 198 - -
Cone7ag0796 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 32 637 IPR046959 -
Cone7ag0796 653 SUPERFAMILY L domain-like 37 226 - -
Cone7ag0796 653 MobiDBLite consensus disorder prediction 330 345 - -
Cone7ag0796 653 Pfam Leucine rich repeat N-terminal domain 36 80 IPR013210 -
Cone7ag0796 653 Pfam Protein tyrosine and serine/threonine kinase 366 628 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0796 653 Gene3D Ribonuclease Inhibitor 34 227 IPR032675 -
Cone7ag0796 653 SUPERFAMILY Protein kinase-like (PK-like) 366 630 IPR011009 -
Cone7ag0796 653 MobiDBLite consensus disorder prediction 298 320 - -
Cone7ag0796 653 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515(InterPro)
Cone7ag0796 653 MobiDBLite consensus disorder prediction 298 345 - -
Cone7ag0796 653 ProSiteProfiles Protein kinase domain profile. 362 644 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0796 653 FunFam pollen receptor-like kinase 1 332 437 - -
Cone7ag0796 653 Gene3D Transferase(Phosphotransferase) domain 1 438 649 - -
Cone7ag0796 653 Gene3D Phosphorylase Kinase; domain 1 329 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0929 Cone-Chr10:4866933 Cone7ag0796 Cone-Chr7:5641062 3.62E-79 dispersed
Cone20ag0623 Cone-Chr20:3723995 Cone7ag0796 Cone-Chr7:5641062 2.85E-153 dispersed
Cone3ag1103 Cone-Chr3:29619254 Cone7ag0796 Cone-Chr7:5641062 7.33E-77 dispersed
Cone4ag0900 Cone-Chr4:7075286 Cone7ag0796 Cone-Chr7:5641062 6.64E-87 dispersed
Cone7ag0796 Cone-Chr7:5641062 Cone9ag1338 Cone-Chr9:10055351 2.32E-57 dispersed
Cone16ag0334 Cone-Chr16:4275471 Cone7ag0796 Cone-Chr7:5641062 7.48E-177 transposed
Cone4ag0870 Cone-Chr4:6050176 Cone7ag0796 Cone-Chr7:5641062 5.82E-144 wgd
Cone4ag0006 Cone-Chr4:52645 Cone7ag0796 Cone-Chr7:5641062 1.89E-35 wgd
Cone7ag0011 Cone-Chr7:60050 Cone7ag0796 Cone-Chr7:5641062 2.30E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83027 PF02298 Cu_bind_like 2.70E-25 CL0026 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0796 K28077 - mdm:103453646 633.254