Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0809 | ATGCCGTCTGTCTATGGAGCTCGGTTGACGACGTTTGAAGATTCTGAGAAGGAGAGCGAGTATGGATATGTCCGGAAGGTATCAGGACCAGTTGTGGTTGCAGATGGCATGGGAGGCGCTGCCATGTATGAATTGGTTCGTGTGGGTCATGATAATCTGATTGGTGAAATCATTCGATTGGAAGGAGATTCTGCCACAATCCAAGTTTATGAGGAAACCGCTGGGTTGACAGTGAATGATCCTGTCCTACGAACACATAAGCCTTTGTCAGTGGAGTTGGGACCTGGAATATTGGGAAATATTTTTGATGGCATTCAGAGGCCTCTGAAAACAATTGCAAAAAGATCTGGGGATGTGTATATCCCCCGTGGTGTCGCCGTTCCGGCTCTCGACAAAGACATACTATGGGAGTTTCAGCCAAAAAAACTAGGCGAGGGTGATCTTGTAACAGGTGGAGATTTGTATGCTACTGTCTTTGAAAACAGTCTTATGGAGCACCATATTGCACTGCCTCCAGATTCTATGGGAAAAATTACTTACATTGCACCACCTGGTCAATACTCATTAAAGGACACTGTGTTAGAGCTAGAGTTTCAAGGTGTCAAGAAACAATTTACTATGCTTCAGACTTGGCCGGTGCGAACACCAAGACCTGTTTCATCGAAGCTTGCTGCGGATACCCCTTTACTTACTGGCCAGCGTGTTCTTGATGCACTATTTCCTTCAGTTCTTGGTGGAACTTGTGCCATACCCGGAGCATTTGGTTGTGGAAAAACAGTCATTAGTCAAGCTCTTTCTAAGTACTCAAACTCTGATACTGTAGTTTATGTTGGTTGCGGGGAACGGGGAAATGAAATGGCTGAGGTTCTTATGGATTTTCCTCAATTGACAATGACTTTGCCTGACGGTCGTGAAGAATCTGTCATGAAGCGTACAACACTAGTGGCTAACACTTCCAACATGCCTGTGGCTGCTCGTGAGGCTTCAATTTATACTGGAATTACTATTGCTGAATATTTTAGAGATATGGGTTACAATGTCAGCATGATGGCTGATTCAACATCCCGATGGGCTGAGGCATTGCGTGAGATATCTGGACGATTGGCTGAAATGCCAGCAGATAGTGGATATCCTGCTTATCTTGCAGCACGTTTGGCCTCTTTCTATGAGCGTGCAGGAAAAGTTAAATGTCTTGGTGGGCCAGAACGTACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCTCCAGGAGGTGATTTCTCAGATCCTGTCACATCTGCAACCCTCAGCATTGTTCAGGTTTTCTGGGGTCTAGACAAAAAGCTTGCCCAAAGAAAGCATTTCCCTTCTGTAAATTGGCTGATATCTTACTCAAAGTACTCATCTGCATTGGAAACTTTCTACGACCAATTTGATCCCGACTTCATTAGCATCAGAACAAAGGCTCGTGAAGTGCTGCAGAGAGAAGATGACCTCAATGAAATTGTTCAACTTGTAGGAAAGGATGCCTTAGCTGAAGGAGACAAGATTACCCTGGAAACTGCAAAGCTGTTGAGGGAGGACTATCTTGCTCAGAATGCATTTACTCCGTATGACAAATTCTGCCCCTTCTACAAGTCAGTTTGGATGATGCGCAATATCATCCATTTCTACAATTTGGCAAATCAGGCAGTAGAGAGAGGAGCTGGCATGGATGGTCAGAAGATAACTTACAGTTTAATAAAGCATCGATTGGGAGATCTGTTTTACCGATTAGTGTCTCAAAAATTTGAGGATCCAGCCGAGGGAGAAGCAGCTCTTGTCGCCAAATTTAACAAGCTCCATGAGGACCTGACAAACGGTTTCCGTGCTCTTGAGGATGAAACTCGGTGA | 1872 | 44.66 | MPSVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVAVPALDKDILWEFQPKKLGEGDLVTGGDLYATVFENSLMEHHIALPPDSMGKITYIAPPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSSALETFYDQFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEAALVAKFNKLHEDLTNGFRALEDETR | 623 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 6009087 | 6016451 | - | Conep07aG0083800.1 | Cone7ag0809 | 441405 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0809 | 623 | Gene3D | - | 134 | 205 | - | - | |
| Cone7ag0809 | 623 | Pfam | C-terminal domain of V and A type ATP synthase | 465 | 561 | - | - | |
| Cone7ag0809 | 623 | FunFam | V-type proton ATPase catalytic subunit A | 459 | 612 | - | - | |
| Cone7ag0809 | 623 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 449 | 458 | IPR020003 | GO:0005524(InterPro) | |
| Cone7ag0809 | 623 | PANTHER | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A | 10 | 620 | IPR022878 | GO:0000325(PANTHER)|GO:0046034(InterPro)|GO:0046961(InterPro)|GO:0046961(PANTHER)|GO:1902600(PANTHER) | |
| Cone7ag0809 | 623 | CDD | ATP-synt_V_A-type_alpha_N | 21 | 87 | - | - | |
| Cone7ag0809 | 623 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 232 | 458 | IPR000194 | GO:0005524(InterPro) | |
| Cone7ag0809 | 623 | Pfam | ATPsynthase alpha/beta subunit N-term extension | 102 | 223 | IPR031686 | - | |
| Cone7ag0809 | 623 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 25 | 85 | IPR004100 | GO:0046034(InterPro)|GO:1902600(InterPro) | |
| Cone7ag0809 | 623 | SUPERFAMILY | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 471 | 553 | - | - | |
| Cone7ag0809 | 623 | SUPERFAMILY | N-terminal domain of alpha and beta subunits of F1 ATP synthase | 17 | 89 | IPR036121 | GO:0046034(InterPro)|GO:1902600(InterPro) | |
| Cone7ag0809 | 623 | Gene3D | - | 20 | 89 | IPR023366 | - | |
| Cone7ag0809 | 623 | CDD | V_A-ATPase_A | 88 | 460 | - | - | |
| Cone7ag0809 | 623 | FunFam | V-type proton ATPase catalytic subunit A | 134 | 205 | - | - | |
| Cone7ag0809 | 623 | CDD | ATP-synt_V_A-type_alpha_C | 475 | 581 | - | - | |
| Cone7ag0809 | 623 | Gene3D | - | 459 | 612 | IPR024034 | - | |
| Cone7ag0809 | 623 | FunFam | V-type proton ATPase catalytic subunit A | 194 | 457 | - | - | |
| Cone7ag0809 | 623 | FunFam | V-type proton ATPase catalytic subunit A | 20 | 89 | - | - | |
| Cone7ag0809 | 623 | NCBIfam | V-type ATPase subunit A | 20 | 611 | IPR005725 | GO:0016887(InterPro)|GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
| Cone7ag0809 | 623 | Hamap | V-type ATP synthase alpha chain [atpA]. | 19 | 622 | IPR022878 | GO:0046034(InterPro)|GO:0046961(InterPro) | |
| Cone7ag0809 | 623 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 202 | 463 | IPR027417 | - | |
| Cone7ag0809 | 623 | Gene3D | - | 91 | 457 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag0877 | Cone-Chr4:6211418 | Cone7ag0809 | Cone-Chr7:6009087 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0809 | K02145 | - | rcu:8259960 | 1214.52 |