Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0824 | ATGAGACCAAGTCAACCGCCTCCCACCTCCACCGCAGCTCCGCCTCCCGCTCGCCGTCTTGGTCGCCGCCAGGATCTACACCTTCCTCTCCCTCAGCGCCATCCATACGTTGCTGTCCCTCTTCCTCTTCCTCCTACCTCCTCCGCCTCCTCCGCAGCTGCCAACTCAGCATCTTCAACAGCCATGAACCACCGCCAGTTCAGCTTATCAGAGGTAGATCGAATCAGCCGAATCGGAAGCGGAGCTGGAGGCACGGTCTACAAAGTGATCCACCGCCCGACCGGCCGTCCGTACGCACTGAAGGTGTTCTACGGCTATCACGACGAGGCGGTGAGACGTCAGATCTGCCGCGAGATCGAGATCCTTCGCGGCGTCGATAACCCTTACATCGTCAAATGCCACGATATGTTCGATCAGAATGGAGAGATCCAAGTCCTTCTTGAGTTAATGGACGGCGGATCTTTAGAAGGCACTCACATCCCTCAGGAAAACCGTCTCTCAGATCTGACTCGACAGATCCTCACCGGACTCGCCTATCTCCATCGCCGCCACATCGTCCACCGTGACATCAAGCCGTCGAATCTCCTAATCAACTGCCACAAGGAGGTTAAGATCGCAGATTTCGGTGTCGGACGAATCCTCGATCAGACTTTGGATGCCTGCAACTCAGCCGTAGGTACGATCGCGTATATGAGTCCGGAGCGGATCAATACAGATCTGAATCAAGGAGTGTACGATGGATATGCTGGCGATATATGGAGCTTAGGAGTGAGCGTATTGGAGTTTTATTTAGGGAAGTTTCCGTTCGGAGTTGGGAGGCAAGGAGATTGGGCGAGCTTGATGTGCTCGATTTGTATGTCGCAGCCGCCGGAGGCACCTCCTACGGCTTCGCCTGAGTTTCGGAGCTTTATAGCTTGTTGTTTGCAGAGGGAGCCAGGGAGGAGATGGACTGCTGCTCAACTACTGCAACATTCCTTCATACTTCGCAATAATAATCATAATAATGATAATAATGGAGGTAATCAGAGACAGAGTCATCATCTTCATCATCAGAATCTTCATCAATTATTACCTCCTCCTCCACGCCCATATCCTTCCTAG | 1101 | 52.68 | MRPSQPPPTSTAAPPPARRLGRRQDLHLPLPQRHPYVAVPLPLPPTSSASSAAANSASSTAMNHRQFSLSEVDRISRIGSGAGGTVYKVIHRPTGRPYALKVFYGYHDEAVRRQICREIEILRGVDNPYIVKCHDMFDQNGEIQVLLELMDGGSLEGTHIPQENRLSDLTRQILTGLAYLHRRHIVHRDIKPSNLLINCHKEVKIADFGVGRILDQTLDACNSAVGTIAYMSPERINTDLNQGVYDGYAGDIWSLGVSVLEFYLGKFPFGVGRQGDWASLMCSICMSQPPEAPPTASPEFRSFIACCLQREPGRRWTAAQLLQHSFILRNNNHNNDNNGGNQRQSHHLHHQNLHQLLPPPPRPYPS | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6143218 | 6144568 | + | Conep07aG0085300.1 | Cone7ag0824 | 441420 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0824 | 366 | ProSiteProfiles | Protein kinase domain profile. | 72 | 327 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0824 | 366 | MobiDBLite | consensus disorder prediction | 37 | 57 | - | - | |
Cone7ag0824 | 366 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 101 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0824 | 366 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 352 | - | - | |
Cone7ag0824 | 366 | FunFam | Mitogen-activated protein kinase 2 | 152 | 338 | - | - | |
Cone7ag0824 | 366 | SMART | serkin_6 | 72 | 327 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0824 | 366 | CDD | PKc_MAPKK_plant_like | 70 | 327 | - | - | |
Cone7ag0824 | 366 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0824 | 366 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 151 | - | - | |
Cone7ag0824 | 366 | SUPERFAMILY | Protein kinase-like (PK-like) | 74 | 328 | IPR011009 | - | |
Cone7ag0824 | 366 | Pfam | Protein kinase domain | 74 | 327 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0824 | 366 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone7ag0824 | 366 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 48 | 336 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cone7ag0824 | 366 | MobiDBLite | consensus disorder prediction | 330 | 366 | - | - | |
Cone7ag0824 | 366 | MobiDBLite | consensus disorder prediction | 330 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone2ag0738 | Cone-Chr2:33145279 | Cone7ag0824 | Cone-Chr7:6143218 | 1.29E-97 | dispersed | |
Cone7ag0824 | Cone-Chr7:6143218 | Cone8ag0483 | Cone-Chr8:3319602 | 1.48E-41 | dispersed | |
Cone17ag0025 | Cone-Chr17:183156 | Cone7ag0824 | Cone-Chr7:6143218 | 1.85E-165 | wgd | |
Cone20ag1378 | Cone-Chr20:8798189 | Cone7ag0824 | Cone-Chr7:6143218 | 4.21E-176 | wgd | |
Cone4ag0888 | Cone-Chr4:6361613 | Cone7ag0824 | Cone-Chr7:6143218 | 5.30E-200 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83029 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0824 | K13413 | - | ath:AT3G21220 | 449.899 |