Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0824 ATGAGACCAAGTCAACCGCCTCCCACCTCCACCGCAGCTCCGCCTCCCGCTCGCCGTCTTGGTCGCCGCCAGGATCTACACCTTCCTCTCCCTCAGCGCCATCCATACGTTGCTGTCCCTCTTCCTCTTCCTCCTACCTCCTCCGCCTCCTCCGCAGCTGCCAACTCAGCATCTTCAACAGCCATGAACCACCGCCAGTTCAGCTTATCAGAGGTAGATCGAATCAGCCGAATCGGAAGCGGAGCTGGAGGCACGGTCTACAAAGTGATCCACCGCCCGACCGGCCGTCCGTACGCACTGAAGGTGTTCTACGGCTATCACGACGAGGCGGTGAGACGTCAGATCTGCCGCGAGATCGAGATCCTTCGCGGCGTCGATAACCCTTACATCGTCAAATGCCACGATATGTTCGATCAGAATGGAGAGATCCAAGTCCTTCTTGAGTTAATGGACGGCGGATCTTTAGAAGGCACTCACATCCCTCAGGAAAACCGTCTCTCAGATCTGACTCGACAGATCCTCACCGGACTCGCCTATCTCCATCGCCGCCACATCGTCCACCGTGACATCAAGCCGTCGAATCTCCTAATCAACTGCCACAAGGAGGTTAAGATCGCAGATTTCGGTGTCGGACGAATCCTCGATCAGACTTTGGATGCCTGCAACTCAGCCGTAGGTACGATCGCGTATATGAGTCCGGAGCGGATCAATACAGATCTGAATCAAGGAGTGTACGATGGATATGCTGGCGATATATGGAGCTTAGGAGTGAGCGTATTGGAGTTTTATTTAGGGAAGTTTCCGTTCGGAGTTGGGAGGCAAGGAGATTGGGCGAGCTTGATGTGCTCGATTTGTATGTCGCAGCCGCCGGAGGCACCTCCTACGGCTTCGCCTGAGTTTCGGAGCTTTATAGCTTGTTGTTTGCAGAGGGAGCCAGGGAGGAGATGGACTGCTGCTCAACTACTGCAACATTCCTTCATACTTCGCAATAATAATCATAATAATGATAATAATGGAGGTAATCAGAGACAGAGTCATCATCTTCATCATCAGAATCTTCATCAATTATTACCTCCTCCTCCACGCCCATATCCTTCCTAG 1101 52.68 MRPSQPPPTSTAAPPPARRLGRRQDLHLPLPQRHPYVAVPLPLPPTSSASSAAANSASSTAMNHRQFSLSEVDRISRIGSGAGGTVYKVIHRPTGRPYALKVFYGYHDEAVRRQICREIEILRGVDNPYIVKCHDMFDQNGEIQVLLELMDGGSLEGTHIPQENRLSDLTRQILTGLAYLHRRHIVHRDIKPSNLLINCHKEVKIADFGVGRILDQTLDACNSAVGTIAYMSPERINTDLNQGVYDGYAGDIWSLGVSVLEFYLGKFPFGVGRQGDWASLMCSICMSQPPEAPPTASPEFRSFIACCLQREPGRRWTAAQLLQHSFILRNNNHNNDNNGGNQRQSHHLHHQNLHQLLPPPPRPYPS 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6143218 6144568 + Conep07aG0085300.1 Cone7ag0824 441420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0824 366 ProSiteProfiles Protein kinase domain profile. 72 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0824 366 MobiDBLite consensus disorder prediction 37 57 - -
Cone7ag0824 366 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524(InterPro)
Cone7ag0824 366 Gene3D Transferase(Phosphotransferase) domain 1 152 352 - -
Cone7ag0824 366 FunFam Mitogen-activated protein kinase 2 152 338 - -
Cone7ag0824 366 SMART serkin_6 72 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0824 366 CDD PKc_MAPKK_plant_like 70 327 - -
Cone7ag0824 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0824 366 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
Cone7ag0824 366 SUPERFAMILY Protein kinase-like (PK-like) 74 328 IPR011009 -
Cone7ag0824 366 Pfam Protein kinase domain 74 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0824 366 MobiDBLite consensus disorder prediction 1 22 - -
Cone7ag0824 366 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 48 336 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone7ag0824 366 MobiDBLite consensus disorder prediction 330 366 - -
Cone7ag0824 366 MobiDBLite consensus disorder prediction 330 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0738 Cone-Chr2:33145279 Cone7ag0824 Cone-Chr7:6143218 1.29E-97 dispersed
Cone7ag0824 Cone-Chr7:6143218 Cone8ag0483 Cone-Chr8:3319602 1.48E-41 dispersed
Cone17ag0025 Cone-Chr17:183156 Cone7ag0824 Cone-Chr7:6143218 1.85E-165 wgd
Cone20ag1378 Cone-Chr20:8798189 Cone7ag0824 Cone-Chr7:6143218 4.21E-176 wgd
Cone4ag0888 Cone-Chr4:6361613 Cone7ag0824 Cone-Chr7:6143218 5.30E-200 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83029 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0824 K13413 - ath:AT3G21220 449.899