Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0827 ATGATGAAGAATTGGAACTGGAAAGGGATATTTGTGCTCATTAATCTCTGCATTTTGGGATGGAAGCCAAGCTCTGTCAATGGAGACACAGATCCAACAGATGCTTCTGCTCTAAAGACTTTGTACTCTAGTTTAAACTCACCAACTCAGCTTACCCAATGGAGTTCAACTGGTGACGATCCATGTGGGCAGTCTTGGAAAGGAGTCACTTGTGCAGGCTCACGGGTCACCGAAATTGTGATATCTGGTTTAGGACTTTCTGGGTCGCTGGGATACCAGCTCACAAGTTTGACATCTTTAACCAACCTAGATGTGAGCAACAACAATCTTGGAGGCGGGATAACTTATCAACTACCACCAAACTTGCTGCAATTAAATCTTGCCCGTAATAACTTGAATGGAGGCATCCCCTATTCTATCTCTCAGATGACTTCTCTTAAGTACTTGGATCTCTCTTATAACTCTTTGCCGGGTAACCTCCCAAGCACTTTTAGCTCCCTTTCTAGCATGAATACAATGTACTTGGAAAACAACCAGTTAGCAGGCACAATAGACGTCCTCGCGAATCTTCCCCTTGAAAATCTAAATATTGCAAATAATCGGTTTACTGGCTGGATTCCTGATCAACTGAAGAGTATCAATTTACAGAAGGATGGTAACTCTTTTAGTTCTGGGCCCGCACCGCCACCTCCTCCCGGTACACCTCCGGCTACCAAAAACAACCCTAATAGAAACTCTGGCAGTAATAACAACCCATCAAGCAGTGGTGGAGGTAAATCTGGAATAGGGGGTGGTGCAATCGCTGGAATTGTAATATCCTTACTTGTAGTTGGAGCTTTAGTAGCATTCTTTCTTGTCAAGAGACGATCCCGGAAATCAGCCCCTGATGTCGAAAAGCTTAATCCCAACCCGCCTTTCACACCTCAGGTTCCAGATGAAGTACAAGAAATGAAGCTGTTACAGACGTCTTCTGCGTTCAACACTAAGACATTTGATACTAATGCTGCAATTAATCTTAAACCCCCACCTGTGGATCGTCACAAGTCATTTGATGAGGATGATATTTCTAGCAAACCTATTGTTGTCAAGAAAAAGGCTGTCACCGCTCCTATTAATGTGAAATCATATTCGATAGCCGACCTCCAGATGGCAACCGGCAGCTTCAGTGTAGACAACTTTCTGGGTGAGGGTTCCTTTGGACGTGTTTATCGAGCTCAGTTTGATGATGGAAAGGTTCTGGCCGTGAAGAAAATAGATTTGTTGGCCCTTACCAGTGACTTATTTGAAGATTTCACAGAGATTGTATCAAGTATCTCCCAATTGCATCACCCAAACGTGACAGAATTGATGGGATATTGCTCAGAGCATGGACAACATCTACTGGTGTATGAATTCCACAAAAATGGCTCCCTCCATGACTTCTTACATTTATCAGATGAATACAGCAAGCCACTGACATGGAATTCTCGTGTCAAAATTGCTTTGGGAACTGCACGTGCTTTAGAGTATCTACATGAAGTTTCGTGTCCATCAATTGTTCATAAAAATATAAGGTCAGCCAACATTTTACTTGATGGAGAACTCAATCCTCACCTTTCCGACTCTGGTCTGGCAAGCTTTGTGGAAAATCTCAATCAAGGATTGGATGCGGGGTCAGGATATAGTGCCCCTGAGGTTACCATGTCGAGTCAGTATACTCTAAAAAGCGACGTTTATAGCTTTGGAGTAGTCATGTTGGAGCTTCTCAGTGGGCGAAAACCATTTGACAGTTCAAGGCCAAGGACAGAACAATCATTGGTTAGGTGGGCCACACCCCAGCTGCACGACATTGATGCTTTGGCCAAGATGGTTGACCCGGCACTCAAAGGGCTCTACCCTGTAAAATCGCTCTCCCGATTTGCCGATGTTATCGCACTTTGCGTGCAGCCTGAGCCAGAGTTTCGACCACCAATGTCGGAAGTAGTCCAGGCCCTAGTCCGGCTTGTGCAAAGAACAAATATGAGTAAGAGAACTATTGGAAGTGATCAAGGATTATCCCCAAGAACTGGAAACCTGGATGAGGAATCTACCTTTTAA 2076 44.22 MMKNWNWKGIFVLINLCILGWKPSSVNGDTDPTDASALKTLYSSLNSPTQLTQWSSTGDDPCGQSWKGVTCAGSRVTEIVISGLGLSGSLGYQLTSLTSLTNLDVSNNNLGGGITYQLPPNLLQLNLARNNLNGGIPYSISQMTSLKYLDLSYNSLPGNLPSTFSSLSSMNTMYLENNQLAGTIDVLANLPLENLNIANNRFTGWIPDQLKSINLQKDGNSFSSGPAPPPPPGTPPATKNNPNRNSGSNNNPSSSGGGKSGIGGGAIAGIVISLLVVGALVAFFLVKRRSRKSAPDVEKLNPNPPFTPQVPDEVQEMKLLQTSSAFNTKTFDTNAAINLKPPPVDRHKSFDEDDISSKPIVVKKKAVTAPINVKSYSIADLQMATGSFSVDNFLGEGSFGRVYRAQFDDGKVLAVKKIDLLALTSDLFEDFTEIVSSISQLHHPNVTELMGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYSKPLTWNSRVKIALGTARALEYLHEVSCPSIVHKNIRSANILLDGELNPHLSDSGLASFVENLNQGLDAGSGYSAPEVTMSSQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRTEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTIGSDQGLSPRTGNLDEESTF 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6173636 6180087 + Conep07aG0085600.1 Cone7ag0827 441423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0827 691 MobiDBLite consensus disorder prediction 224 238 - -
Cone7ag0827 691 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515(InterPro)
Cone7ag0827 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 665 IPR046959 -
Cone7ag0827 691 MobiDBLite consensus disorder prediction 216 259 - -
Cone7ag0827 691 MobiDBLite consensus disorder prediction 670 691 - -
Cone7ag0827 691 Gene3D Ribonuclease Inhibitor 31 249 IPR032675 -
Cone7ag0827 691 Pfam Protein tyrosine and serine/threonine kinase 390 658 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0827 691 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 156 - -
Cone7ag0827 691 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cone7ag0827 691 Gene3D Phosphorylase Kinase; domain 1 353 465 - -
Cone7ag0827 691 SUPERFAMILY L domain-like 31 211 - -
Cone7ag0827 691 ProSiteProfiles Protein kinase domain profile. 388 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0827 691 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 351 465 - -
Cone7ag0827 691 ProSitePatterns Protein kinases ATP-binding region signature. 394 417 IPR017441 GO:0005524(InterPro)
Cone7ag0827 691 SUPERFAMILY Protein kinase-like (PK-like) 370 658 IPR011009 -
Cone7ag0827 691 MobiDBLite consensus disorder prediction 239 258 - -
Cone7ag0827 691 Pfam Leucine Rich Repeat 192 212 IPR001611 GO:0005515(InterPro)
Cone7ag0827 691 Gene3D Transferase(Phosphotransferase) domain 1 467 678 - -
Cone7ag0827 691 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 466 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0853 Cone-Chr4:5700963 Cone7ag0827 Cone-Chr7:6173636 0 dispersed
Cone4ag0869 Cone-Chr4:6042321 Cone7ag0827 Cone-Chr7:6173636 2.76E-176 dispersed
Cone5ag1846 Cone-Chr5:12958518 Cone7ag0827 Cone-Chr7:6173636 1.32E-165 dispersed
Cone7ag0806 Cone-Chr7:5899040 Cone7ag0827 Cone-Chr7:6173636 5.50E-39 dispersed
Cone7ag0827 Cone-Chr7:6173636 Cone9ag1056 Cone-Chr9:5752906 4.97E-126 dispersed
Cone17ag0031 Cone-Chr17:205759 Cone7ag0827 Cone-Chr7:6173636 2.19E-237 wgd
Cone20ag1372 Cone-Chr20:8777652 Cone7ag0827 Cone-Chr7:6173636 5.34E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83030 PF14432 DYW_deaminase 3.30E-35 CL0109 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0827 - - - 0.0