Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0832 | ATGACCCGATACACCGGTGAACATTCCTCCACCGGAAACTCGGAATATTCCGGCACCGGAAAACCAACATCCATAACCAACCAAACCAAGAAGCTTCTCTTACCCTTCATTGGAACAATATTACTACTAGCTACAATTATTGCTATTATTGCTAACGTTAGCAATAACAAAAACAAAACCTCCCATGATTCTCATTCCATAATCAAGTCATCATGTAGCATCACAAGATACCCTGAGTTATGCTACTCCGCCATCACCTCAGCGACCAAAGGCAGCAACACCATCAAAAGCACCACCCAAAAGGACGTTATAGTATTGTCCATAAATATCACAACTAGAGCACTAGAACACAACTATTTCACCATTGAAAAACTCCTATCTTTCAAAAACCTCACCAAGAGAGAAAAATGTGCCCTCCATGATTGCCTCGAGACAGTTGATGAAACCCTAGATGAACTCCACAAAGCTCTTGAAGACCTCCATGACTACCCTAGCAACAAATCTCTTACTTCTTACGCCGATGACCTCAAAACGTTAGTTAGTTCTGCCATTACTAATCAAGAGACGTGTCTGGACGGATTCTCACACGATGACACCGACAAACAACTACGTAGATCCTTACAAGAGGGTCAAGTTCATGTGGAGAAAATGTGTAGTAATGCTTTGGCTATGATTAGGAACATGACTGATAGTGATATAGCTAATTATGAGAATAAGATGATGAAGCATAATAGGAAGCTTGAGGAGGATCAGGAGGATGCGGGGGATCGTTATCAGTGGCCAGGATGGCTATCGGCAGCAGACAGGCGGACTCTCCAGTCGTCGACAGTGACACCGGATGTGGTGGTAGCAGCCGATGGCAGCGGTGATTATAAGACAGTAGCGATGGCAGTGGCGGCAGCACCTCAAGGTAGTAGTAAGAGATATGTTATTAAAATCAAAGCAGGAGTTTATAGAGAAAATGTGGAGGTGCCTAAGAAGAAGATTAATATAATGTTTTTGGGTGATGGGAGGAAGAATACAATAATTACAGGTAGTAGAAATGTGGTTGATGGGAGCACAACTTTCAAATCTGCAACTGTTGCTGTTGTGGGTGAGAGATTTCTGGCACGTGACATCACGTTTCAAAACACAGCAGGCTCATCAAAGCACCAAGCCGTTGCCCTACGTGTCGGCTCGGACCTCTCAGCATTCTACCAATGCGACATGATTGCATACCAAGACACCCTCTACGTCCACTCCAACCGTCAATTCTACATCAACTGCTTCATTGCCGGCACCGTCGACTTCATCTTCGGCAATGCCGCTGCAGTTTTCCAAGACTGTGACATTCATGCAAGAAAACCTAACTCCGGTCAGAAAAACATGCTTACTGCCCAAGGAAGAACCGATCCAAACCAAAATACAGGGATTGTCATCCAGAAATGTCGGATCGGTGCTACGTCTGATCTACAGCCTGTTAGAAGCAGCTTCCCGACATATTTAGGGCGGCCGTGGAAGGAGTATTCTAGGACTGTCATTATGCAGTCGACGATAAGTGATGTAATAAATCCAGCAGGGTGGTCGGAATGGTCAGGTAGTTTTGCGTTGAGTACTTTATTTTACGGTGAGTATTTGAATACAGGAATTGGTGCTTCGACTTCTAAGAGGGTGAGCTGGAAGGGGTTTAAGGTGATAACGAATGCGACGGAGGCTCAAGCTTTTACGGCTGCGAGGTTTGTTGCCGGAGGTAGTTGGTTGAGTTCAACTGGCTTCCCATTTTCTCTTGGTCTGTAA | 1776 | 44.88 | MTRYTGEHSSTGNSEYSGTGKPTSITNQTKKLLLPFIGTILLLATIIAIIANVSNNKNKTSHDSHSIIKSSCSITRYPELCYSAITSATKGSNTIKSTTQKDVIVLSINITTRALEHNYFTIEKLLSFKNLTKREKCALHDCLETVDETLDELHKALEDLHDYPSNKSLTSYADDLKTLVSSAITNQETCLDGFSHDDTDKQLRRSLQEGQVHVEKMCSNALAMIRNMTDSDIANYENKMMKHNRKLEEDQEDAGDRYQWPGWLSAADRRTLQSSTVTPDVVVAADGSGDYKTVAMAVAAAPQGSSKRYVIKIKAGVYRENVEVPKKKINIMFLGDGRKNTIITGSRNVVDGSTTFKSATVAVVGERFLARDITFQNTAGSSKHQAVALRVGSDLSAFYQCDMIAYQDTLYVHSNRQFYINCFIAGTVDFIFGNAAAVFQDCDIHARKPNSGQKNMLTAQGRTDPNQNTGIVIQKCRIGATSDLQPVRSSFPTYLGRPWKEYSRTVIMQSTISDVINPAGWSEWSGSFALSTLFYGEYLNTGIGASTSKRVSWKGFKVITNATEAQAFTAARFVAGGSWLSSTGFPFSLGL | 591 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 6238440 | 6241599 | + | Conep07aG0086100.1 | Cone7ag0832 | 441428 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0832 | 591 | FunFam | Pectinesterase | 64 | 229 | - | - | |
| Cone7ag0832 | 591 | CDD | PMEI-like_3 | 70 | 229 | - | - | |
| Cone7ag0832 | 591 | PANTHER | PECTINESTERASE | 39 | 582 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
| Cone7ag0832 | 591 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 63 | 229 | IPR035513 | - | |
| Cone7ag0832 | 591 | Gene3D | - | 273 | 591 | IPR012334 | - | |
| Cone7ag0832 | 591 | Pfam | Plant invertase/pectin methylesterase inhibitor | 67 | 224 | IPR006501 | GO:0004857(InterPro) | |
| Cone7ag0832 | 591 | Coils | Coil | 233 | 253 | - | - | |
| Cone7ag0832 | 591 | ProSitePatterns | Pectinesterase signature 2. | 424 | 433 | IPR033131 | - | |
| Cone7ag0832 | 591 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Cone7ag0832 | 591 | NCBIfam | pectinesterase inhibitor domain | 41 | 228 | IPR006501 | GO:0004857(InterPro) | |
| Cone7ag0832 | 591 | FunFam | Pectinesterase | 274 | 591 | - | - | |
| Cone7ag0832 | 591 | Pfam | Pectinesterase | 280 | 576 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
| Cone7ag0832 | 591 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 66 | 229 | IPR035513 | - | |
| Cone7ag0832 | 591 | SUPERFAMILY | Pectin lyase-like | 275 | 590 | IPR011050 | - | |
| Cone7ag0832 | 591 | SMART | PMEI_2 | 63 | 224 | IPR006501 | GO:0004857(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0094 | Cone-Chr1:472465 | Cone7ag0832 | Cone-Chr7:6238440 | 2.17E-135 | dispersed | |
| Cone20ag1370 | Cone-Chr20:8765996 | Cone7ag0832 | Cone-Chr7:6238440 | 1.32E-296 | dispersed | |
| Cone3ag0815 | Cone-Chr3:4194970 | Cone7ag0832 | Cone-Chr7:6238440 | 4.43E-127 | dispersed | |
| Cone4ag0894 | Cone-Chr4:6621834 | Cone7ag0832 | Cone-Chr7:6238440 | 1.00E-120 | dispersed | |
| Cone6ag0383 | Cone-Chr6:1864724 | Cone7ag0832 | Cone-Chr7:6238440 | 7.99E-143 | dispersed | |
| Cone7ag0832 | Cone-Chr7:6238440 | Cone9ag0410 | Cone-Chr9:1895925 | 8.79E-135 | dispersed | |
| Cone17ag0033 | Cone-Chr17:214851 | Cone7ag0832 | Cone-Chr7:6238440 | 2.53E-294 | wgd | |
| Cone20ag1368 | Cone-Chr20:8762971 | Cone7ag0832 | Cone-Chr7:6238440 | 6.81E-60 | wgd | |
| Cone4ag0890 | Cone-Chr4:6423977 | Cone7ag0832 | Cone-Chr7:6238440 | 3.02E-123 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0832 | K01051 | - | vvi:100251413 | 855.899 |