Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0832 ATGACCCGATACACCGGTGAACATTCCTCCACCGGAAACTCGGAATATTCCGGCACCGGAAAACCAACATCCATAACCAACCAAACCAAGAAGCTTCTCTTACCCTTCATTGGAACAATATTACTACTAGCTACAATTATTGCTATTATTGCTAACGTTAGCAATAACAAAAACAAAACCTCCCATGATTCTCATTCCATAATCAAGTCATCATGTAGCATCACAAGATACCCTGAGTTATGCTACTCCGCCATCACCTCAGCGACCAAAGGCAGCAACACCATCAAAAGCACCACCCAAAAGGACGTTATAGTATTGTCCATAAATATCACAACTAGAGCACTAGAACACAACTATTTCACCATTGAAAAACTCCTATCTTTCAAAAACCTCACCAAGAGAGAAAAATGTGCCCTCCATGATTGCCTCGAGACAGTTGATGAAACCCTAGATGAACTCCACAAAGCTCTTGAAGACCTCCATGACTACCCTAGCAACAAATCTCTTACTTCTTACGCCGATGACCTCAAAACGTTAGTTAGTTCTGCCATTACTAATCAAGAGACGTGTCTGGACGGATTCTCACACGATGACACCGACAAACAACTACGTAGATCCTTACAAGAGGGTCAAGTTCATGTGGAGAAAATGTGTAGTAATGCTTTGGCTATGATTAGGAACATGACTGATAGTGATATAGCTAATTATGAGAATAAGATGATGAAGCATAATAGGAAGCTTGAGGAGGATCAGGAGGATGCGGGGGATCGTTATCAGTGGCCAGGATGGCTATCGGCAGCAGACAGGCGGACTCTCCAGTCGTCGACAGTGACACCGGATGTGGTGGTAGCAGCCGATGGCAGCGGTGATTATAAGACAGTAGCGATGGCAGTGGCGGCAGCACCTCAAGGTAGTAGTAAGAGATATGTTATTAAAATCAAAGCAGGAGTTTATAGAGAAAATGTGGAGGTGCCTAAGAAGAAGATTAATATAATGTTTTTGGGTGATGGGAGGAAGAATACAATAATTACAGGTAGTAGAAATGTGGTTGATGGGAGCACAACTTTCAAATCTGCAACTGTTGCTGTTGTGGGTGAGAGATTTCTGGCACGTGACATCACGTTTCAAAACACAGCAGGCTCATCAAAGCACCAAGCCGTTGCCCTACGTGTCGGCTCGGACCTCTCAGCATTCTACCAATGCGACATGATTGCATACCAAGACACCCTCTACGTCCACTCCAACCGTCAATTCTACATCAACTGCTTCATTGCCGGCACCGTCGACTTCATCTTCGGCAATGCCGCTGCAGTTTTCCAAGACTGTGACATTCATGCAAGAAAACCTAACTCCGGTCAGAAAAACATGCTTACTGCCCAAGGAAGAACCGATCCAAACCAAAATACAGGGATTGTCATCCAGAAATGTCGGATCGGTGCTACGTCTGATCTACAGCCTGTTAGAAGCAGCTTCCCGACATATTTAGGGCGGCCGTGGAAGGAGTATTCTAGGACTGTCATTATGCAGTCGACGATAAGTGATGTAATAAATCCAGCAGGGTGGTCGGAATGGTCAGGTAGTTTTGCGTTGAGTACTTTATTTTACGGTGAGTATTTGAATACAGGAATTGGTGCTTCGACTTCTAAGAGGGTGAGCTGGAAGGGGTTTAAGGTGATAACGAATGCGACGGAGGCTCAAGCTTTTACGGCTGCGAGGTTTGTTGCCGGAGGTAGTTGGTTGAGTTCAACTGGCTTCCCATTTTCTCTTGGTCTGTAA 1776 44.88 MTRYTGEHSSTGNSEYSGTGKPTSITNQTKKLLLPFIGTILLLATIIAIIANVSNNKNKTSHDSHSIIKSSCSITRYPELCYSAITSATKGSNTIKSTTQKDVIVLSINITTRALEHNYFTIEKLLSFKNLTKREKCALHDCLETVDETLDELHKALEDLHDYPSNKSLTSYADDLKTLVSSAITNQETCLDGFSHDDTDKQLRRSLQEGQVHVEKMCSNALAMIRNMTDSDIANYENKMMKHNRKLEEDQEDAGDRYQWPGWLSAADRRTLQSSTVTPDVVVAADGSGDYKTVAMAVAAAPQGSSKRYVIKIKAGVYRENVEVPKKKINIMFLGDGRKNTIITGSRNVVDGSTTFKSATVAVVGERFLARDITFQNTAGSSKHQAVALRVGSDLSAFYQCDMIAYQDTLYVHSNRQFYINCFIAGTVDFIFGNAAAVFQDCDIHARKPNSGQKNMLTAQGRTDPNQNTGIVIQKCRIGATSDLQPVRSSFPTYLGRPWKEYSRTVIMQSTISDVINPAGWSEWSGSFALSTLFYGEYLNTGIGASTSKRVSWKGFKVITNATEAQAFTAARFVAGGSWLSSTGFPFSLGL 591
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 6238440 6241599 + Conep07aG0086100.1 Cone7ag0832 441428
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0832 591 FunFam Pectinesterase 64 229 - -
Cone7ag0832 591 CDD PMEI-like_3 70 229 - -
Cone7ag0832 591 PANTHER PECTINESTERASE 39 582 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone7ag0832 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 229 IPR035513 -
Cone7ag0832 591 Gene3D - 273 591 IPR012334 -
Cone7ag0832 591 Pfam Plant invertase/pectin methylesterase inhibitor 67 224 IPR006501 GO:0004857(InterPro)
Cone7ag0832 591 Coils Coil 233 253 - -
Cone7ag0832 591 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Cone7ag0832 591 MobiDBLite consensus disorder prediction 1 22 - -
Cone7ag0832 591 NCBIfam pectinesterase inhibitor domain 41 228 IPR006501 GO:0004857(InterPro)
Cone7ag0832 591 FunFam Pectinesterase 274 591 - -
Cone7ag0832 591 Pfam Pectinesterase 280 576 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone7ag0832 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 229 IPR035513 -
Cone7ag0832 591 SUPERFAMILY Pectin lyase-like 275 590 IPR011050 -
Cone7ag0832 591 SMART PMEI_2 63 224 IPR006501 GO:0004857(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0094 Cone-Chr1:472465 Cone7ag0832 Cone-Chr7:6238440 2.17E-135 dispersed
Cone20ag1370 Cone-Chr20:8765996 Cone7ag0832 Cone-Chr7:6238440 1.32E-296 dispersed
Cone3ag0815 Cone-Chr3:4194970 Cone7ag0832 Cone-Chr7:6238440 4.43E-127 dispersed
Cone4ag0894 Cone-Chr4:6621834 Cone7ag0832 Cone-Chr7:6238440 1.00E-120 dispersed
Cone6ag0383 Cone-Chr6:1864724 Cone7ag0832 Cone-Chr7:6238440 7.99E-143 dispersed
Cone7ag0832 Cone-Chr7:6238440 Cone9ag0410 Cone-Chr9:1895925 8.79E-135 dispersed
Cone17ag0033 Cone-Chr17:214851 Cone7ag0832 Cone-Chr7:6238440 2.53E-294 wgd
Cone20ag1368 Cone-Chr20:8762971 Cone7ag0832 Cone-Chr7:6238440 6.81E-60 wgd
Cone4ag0890 Cone-Chr4:6423977 Cone7ag0832 Cone-Chr7:6238440 3.02E-123 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0832 K01051 - vvi:100251413 855.899