Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0835 ATGATGTTTCCTTCCCAAGGATCTTCTAGGCACACTTGTAGTCTTCTTGCTGTCACTTGTGGAAGTTTAACCGAAGATAAGCGTAAGAAGGATGTTGTTGATGATCAGCCGAGATATCCCTTTCCAGAATTGGCTTCGTCAGGCCGTTTGGAGGTTCAGGTTCTGACAAGTCCAAGCAAAGATGAATTTGGTAGAGTTGTGGAATCATATCAACCAAACTTTGTGTATTTGCAAGGAGTGCAACTTGAGAATGGTGAAGTGGGGTCTTTAGTTTGGGGAGATGTTGATTTTTCGTCTGTAGATGCTATATGTGATCTGTTTTGTACACCTTTGCCTACCACTGTTTATTTGGAAATTCCAAATGGAGAGGAATTGGCTGAGGCACTTCACTTCAAGGGAATTCCTTATGTGATATATTGGAAGAGCACATTTTCTTGTTATGCTGCCTGCCATTTCCGTAATGCATTGCTTTTGGTGGTTCAAAGCTCATCTACTCATACATGGGATGCATTTCAACTTGCACATGCTTCCTTTAGGCTTTACTGTTTGCAAGGCAAAGATGTTCTTCCTAGAAATTCCGATCGAGGAAGGCTTGAGCAGGGCCCACATCTTCTTGGGGAGCGGTCAAAGATACATGTAGAACTCCCTGAAATAGATCCAGGTGAAGATGAAGATAGCTCTCTAGGTGCACTTCCTGCCGTAAATATTCACGACGAAGAAGTGAACATGAGGTTTCTTATATGTGGAGTGCCCTCTACATTGGATTCATTGCTACTTGAATCTCTGGAAGATGGTCTCACTGCCCTCTTGGACATTGAAGTGCGTGGGGGCAAGCTTCACGGAAAGTTCAGTGCCCCTCCACCCCCTCTTCAGGCAGGGACATTTTCTCGTGGTGTTGTGACTATGAGATGTGATATATCGACCTCTAGTTCGGCTCACATTTCACTTCTTGTCTCAGGTAGTGCACAAACTTGTTTTGATGATCAGCTATTGGAAAATCATATTAAAAATGAAATTATTGAAAAGTGCCAACTAGTTCATGCAATTTCTAATTCTAATGGAAACAAACTTCCTTTGTCCGAGCCTCGAAGATCCACTGCAATTGCTTGTGGGGCCACAGTATTTGAAGTTTGCATGAAGGTGCCTCAATGGGCTTCACAGGTGTTGAGGCAACTTGCCCCAGATCTTTCATACCGTAGCTTGGTAGCACTTGGAATAGCAAGCATTCAAGGATTGCCTGTTGCTTCCTTTGAGAAAGATGATACTGAGCGCCTCCTTTTCTTCTGTTCAAGTCAGCAAAAAGATGTATATTCCGATAATTTGATTCTTAGAAACAGCCCAAGCTGGTTAAAGCCGCCTGCTCCTAGCAGAAAGAGGTCTGAACTGAGCCAAGGACCTATCCCCAGTTCTCTTAATGGTATTGAATATTCAAATACTCTTTCCACTAGAAGAATAGATGAAGAGAACAAAGAGACTCCATTGACTAATGGCTTCAAGACACCTTTACCTCCGGCCAGGCAAAGATTGAAAATAGCTGCCATGAGACCTATTCCTCATGTTCATCGTCATAAAATGACACCCTTCTCAGGATTGCCCCTGGCAGAAGGGCATGATGGAGGTCAAGTTAAGGCTATGGTACCTGTCGTGACTCCTGTAAAGCACATTGTTATGGGGTCCACCTCTTCAACTCATCGAAAATCTTTCTCAAGCTCATCTCAGTCCAAGCAGATTATCTCCTTGAACCCATTACCTTTGAAGAAACATGGTTGTGGCAGAAGCCAAATACAGGCTTGTTCTGAGGAAGAGTTTTTGAAGGATGTGATGCAGTTTCTAATTCTTCGAGGACATAATCGGCTCATTCCTCGAGGTGGGCTTGCAGAGTTTCCAGATGCCATACTTAATGGGAAGCGTCTTGACTTGTACAACTTGTACAAAGAGGTGGTCACGAGAGGGGGCTTTCATGTTGGGAATGGCATTAACTGGAAAGGACAAATCTTCTCAAAGATGCGCAATTATACCATGACAAATAGAATGACTGGTGTTGGAAATACACTGAAAAGACATTACGAGACTTATCTTCTAGAATATGAATTGGCCCATGATGATGTAGATGGGGAGTGTTGTTTGCTATGTCACAGTAGTGCAGCAGGGGATTGGGTGAACTGCGGGATTTGCGGTGAGTGGGCCCACTTTGGCTGTGACAGACGGCAGGGTTTAGGTGCATTTAAGGATTATGCAAAAACAGATGGACTAGAATATGTATGTCCGCCCTGTAGCATTACGAGTTCAAAGAAAAAATCGCAAAAAATCACAAATGGGTATCCTCAAGGCTTAATAGCTTCAAGAGCATTGTGA 2355 43.4 MMFPSQGSSRHTCSLLAVTCGSLTEDKRKKDVVDDQPRYPFPELASSGRLEVQVLTSPSKDEFGRVVESYQPNFVYLQGVQLENGEVGSLVWGDVDFSSVDAICDLFCTPLPTTVYLEIPNGEELAEALHFKGIPYVIYWKSTFSCYAACHFRNALLLVVQSSSTHTWDAFQLAHASFRLYCLQGKDVLPRNSDRGRLEQGPHLLGERSKIHVELPEIDPGEDEDSSLGALPAVNIHDEEVNMRFLICGVPSTLDSLLLESLEDGLTALLDIEVRGGKLHGKFSAPPPPLQAGTFSRGVVTMRCDISTSSSAHISLLVSGSAQTCFDDQLLENHIKNEIIEKCQLVHAISNSNGNKLPLSEPRRSTAIACGATVFEVCMKVPQWASQVLRQLAPDLSYRSLVALGIASIQGLPVASFEKDDTERLLFFCSSQQKDVYSDNLILRNSPSWLKPPAPSRKRSELSQGPIPSSLNGIEYSNTLSTRRIDEENKETPLTNGFKTPLPPARQRLKIAAMRPIPHVHRHKMTPFSGLPLAEGHDGGQVKAMVPVVTPVKHIVMGSTSSTHRKSFSSSSQSKQIISLNPLPLKKHGCGRSQIQACSEEEFLKDVMQFLILRGHNRLIPRGGLAEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTMTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPPCSITSSKKKSQKITNGYPQGLIASRAL 784
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 6286278 6294018 + Conep07aG0086400.1 Cone7ag0835 441431
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0835 784 MobiDBLite consensus disorder prediction 462 480 - -
Cone7ag0835 784 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 780 IPR042293 -
Cone7ag0835 784 SUPERFAMILY FYVE/PHD zinc finger 693 762 IPR011011 -
Cone7ag0835 784 ProSiteProfiles ARID domain profile. 597 701 IPR001606 GO:0003677(InterPro)
Cone7ag0835 784 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 765 IPR013083 -
Cone7ag0835 784 MobiDBLite consensus disorder prediction 448 480 - -
Cone7ag0835 784 SMART ARID_2 594 697 - -
Cone7ag0835 784 CDD ARID 599 697 - -
Cone7ag0835 784 Pfam ARID/BRIGHT DNA binding domain 600 697 IPR001606 GO:0003677(InterPro)
Cone7ag0835 784 SUPERFAMILY ARID-like 597 712 IPR036431 GO:0003677(InterPro)
Cone7ag0835 784 Gene3D - 592 700 IPR036431 GO:0003677(InterPro)
Cone7ag0835 784 CDD PHD_ARID4_like 707 758 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0844 Cone-Chr4:5560215 Cone7ag0835 Cone-Chr7:6286278 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46502 PF02230 Abhydrolase_2 2.20E-39 CL0028 Cone TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0835 - - - 0.0