Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0865 ATGCCTCATAAAACCACTTACTTTTTCCCAAGGCAATTTCCTGACCGCGGATTTGAGCCGGGGTCGACATCCAAACAGAAAGTAGTTGATCACGAGACGAAGCCAGTTATCAAAGATACTGTTAGCATTGAAAGCGATGTTGCGAAGTCGACTAATCAACGCCCTGCACGCGATCACTTTGCGGTCACGAAGTCTTCAGCCGTATCCGATCTTTTCACGGGCGATAAATCTCAAAGCAAGAAGCAATTGGCTGCTTTTTACGATTGGTTCGTGGATAGGAAGGCTTCTCGATCGGCATCAGCTCACGTGAAGACCTGGCTTTCTAATTGTGACGAGGACCGTGAGCTTTTGCTTCCTGCGCCTACGTCGGAGCCAGAAGTACCGGGGCCAGTGTTGCCGAAGGATCGGAGTGTTGACCGGAGCTTTGACCAGCAGGTTTCTCTCCCTCGGCTATCTAGCGGGAGTAGCTATGCCGGGAGCTTGTTTTCCGGCACAGGAACGGTGGATGGGAATTTTTCCAGCGATGTTAAGGATTCTACCATGTCTAAGATGTCATCGACTTTGCCCACGGCGAGAGGTAAGGAGGTGGAGGTGGAGGTGGAGAACAAGGGGAGTTTGGCGCGGAAGTCGAGGGAGAGTTACTGTTTGCAGCTTGCTTTCGCCAGAAGGCTTACTTCTCATGCTTCTCTTGCTAGTAGTGAACTGGTGGTTATGCAAGATAGCAGAGTGGAGGTTACAGATGCTGAAACCGTTTCCTATAGGCTTTGGGTCAGTGGTTGCTTGTCTTACTCTGACAAGATATCAGATGGCTTCTACAATATTCTGGGGATGAATCCATATCTGTGGGTAATGTGTAATGACTCTGAAGAAGGTAGACAGATACCACCGCTTACATCGCTTAAATCCATTGAACCTAATGCTACATCGATGGAGGTGATTCTTGTTGATAGGCGTGGTGATTCTCGCCTTAAAGAGCTTCAAAATAAAGCACAAGAGTTGTACTGTGATTCAGAGAATACCCTAGTTTTGGTAGAGAAGCTAGGAAAACTTGTTGCCATCTACATGGGGGGCACTTTTCCAGTAGAGAAGGGAGATCTCCACCTCCACTGGAAAGTGGTGAGCAAGAGGTTAAGGGATTTCCAGAAATGCATAGTGATTCCTATTGGCAATCTTTCTATGGGACTCTGCAGGCATCGCGCAATACTTTTTAAGAAATTGGCAGATCACATAGGTTTGCCATGTCGAATAGCTCGGGGTTGCAAGTACTGTGCAGCAGATCATCGGTCTTCTTGCCTTGTCAAAATTGAAGATGAGAAGCAGTCATTGAGGGAATATGTAGTTGATCTAGTCGGGGAACCAGGAAATATACATCGTCCAGATTCCTCAATTAATGGAGGTTTCCTTTCTTCAATTCCTTCACCATTTCAAATTTCTAATCTGAAAGAATACCAACAACCAGACAGGGATAGTCCATCTTGTTGTCAAATTGTAAACTCCAAGTACAAATTTGCTTCACCAGAAAAATTTCCATATTCAGGCGGTGGAGAAAGTCACCAAACAAAGGACAGTGGTTTAAGTAAAAATCCAAATGCTTCAACTTATACTTCAGTTGGTCAAGATCATATAGGGATGGAGACTTCACCAATGTGTTTCGACAAAAAAGGGAATATTAAAAGTTGCAAGCTTCAGAGTCATGCGGTACCGACTGTGGAGAGCAATGCTTCTGAGGTGTTAGATTCTGCTGTAGAAGCTTCTTTTTGTGAAAAATTTACTAGATTAGGTGAGAACAAGGTAGTCATACAACAAACATACAGAAAAGAGAGAATTGCGTCGGGAAGTCCAGTTATAGAAAAGGGTACTAATCAAATAAAATCAAGCCTAGCTTGTAAAGCTGATGATGAGGAGGTTGAGAGTAGATCGGAAAATCAAGGAAACCAAGGCCAATTTCATACTGAAACAGTCCCAAGATATGTGGCGCTTGAACCATCTCTTGCAATGGATTGGCTTGAGATCGCATGGGATGAATTATGTATGAAGGAGCGTGTTGGTGCTGGCTCATTTGGTACTGTGCATCGTGCTGAATGGCATGGATCGGATGTTGCTGTGAAGATTCTAACACTGCAGGATTTCCAAGATGATCAATTAAAGGAGTTTCTAAGAGAGGTTGCGATAATGAAGCGTGTCCGCCATCCAAATGTTGTTCTCTTCATGGGTGCTGTAACCAAACGTCCCCATCTGTCAATAGTGACTGAATATCTTCCAAGGGGTAGTCTCTACCGCCTTATTCACAGGCCGGCTTCTGGTGAACTGTTGGATCAGAGAAGACGCTTACGTATGGCACTGGATGTGGCCAAGGGCATCAATTATCTCCATTGCCTTAACCCTCCAATAGTGCATTGGGATCTTAAATCTCCAAACTTGTTGGTAGATAAAAATTGGACTGTAAAGGTATGTGATTTTGGATTATCCAGGTTCAAGGCAAACACTTTCATATCGTCCAAATCTGTTGCCGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGGGAGCCCTCGAATGAAAAATCTGATGTATACAGCTTTGGAGTGATCCTTTGGGAACTTGTTACCATGGAACAACCCTGGAATGGACTTGGCCCGGCACAGGTGGTTGGGGCTGTTGCTTTCCAAAACAGAAGGCTTGCTATCCCTCCAAATACTCCCCCGTTGCTGACTTCTCTTATCGAGTCTTGCTGGGCTAATGATCCAGTTCAACGCCCATCATTCAAAAGCATAGTCGACTCTCTAAAGAAGTTACTCAAGACTCCTCAGCAGCTACTACAGCTTAGCGGCGGAACTTGA 2844 45.08 MPHKTTYFFPRQFPDRGFEPGSTSKQKVVDHETKPVIKDTVSIESDVAKSTNQRPARDHFAVTKSSAVSDLFTGDKSQSKKQLAAFYDWFVDRKASRSASAHVKTWLSNCDEDRELLLPAPTSEPEVPGPVLPKDRSVDRSFDQQVSLPRLSSGSSYAGSLFSGTGTVDGNFSSDVKDSTMSKMSSTLPTARGKEVEVEVENKGSLARKSRESYCLQLAFARRLTSHASLASSELVVMQDSRVEVTDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDSEEGRQIPPLTSLKSIEPNATSMEVILVDRRGDSRLKELQNKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEKGDLHLHWKVVSKRLRDFQKCIVIPIGNLSMGLCRHRAILFKKLADHIGLPCRIARGCKYCAADHRSSCLVKIEDEKQSLREYVVDLVGEPGNIHRPDSSINGGFLSSIPSPFQISNLKEYQQPDRDSPSCCQIVNSKYKFASPEKFPYSGGGESHQTKDSGLSKNPNASTYTSVGQDHIGMETSPMCFDKKGNIKSCKLQSHAVPTVESNASEVLDSAVEASFCEKFTRLGENKVVIQQTYRKERIASGSPVIEKGTNQIKSSLACKADDEEVESRSENQGNQGQFHTETVPRYVALEPSLAMDWLEIAWDELCMKERVGAGSFGTVHRAEWHGSDVAVKILTLQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGELLDQRRRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMEQPWNGLGPAQVVGAVAFQNRRLAIPPNTPPLLTSLIESCWANDPVQRPSFKSIVDSLKKLLKTPQQLLQLSGGT 947
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6610121 6616434 - Conep07aG0089400.1 Cone7ag0865 441461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0865 947 PRINTS Tyrosine kinase catalytic domain signature 791 809 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 PRINTS Tyrosine kinase catalytic domain signature 901 923 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 PRINTS Tyrosine kinase catalytic domain signature 857 879 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 PANTHER SERINE-THREONINE PROTEIN KINASE 228 934 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone7ag0865 947 MobiDBLite consensus disorder prediction 516 540 - -
Cone7ag0865 947 SUPERFAMILY Protein kinase-like (PK-like) 651 929 IPR011009 -
Cone7ag0865 947 SMART serkin_6 676 934 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 Pfam Protein tyrosine and serine/threonine kinase 678 930 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 ProSiteProfiles Protein kinase domain profile. 676 934 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0865 947 Gene3D Transferase(Phosphotransferase) domain 1 755 941 - -
Cone7ag0865 947 MobiDBLite consensus disorder prediction 511 540 - -
Cone7ag0865 947 CDD STKc_MAP3K-like 682 930 - -
Cone7ag0865 947 FunFam Serine/threonine-protein kinase CTR1 755 940 - -
Cone7ag0865 947 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Cone7ag0865 947 FunFam Serine/threonine-protein kinase isoform 1 666 754 - -
Cone7ag0865 947 ProSitePatterns Protein kinases ATP-binding region signature. 682 703 IPR017441 GO:0005524(InterPro)
Cone7ag0865 947 Pfam Ethylene-responsive protein kinase Le-CTR1 248 456 - -
Cone7ag0865 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0186 Cone-Chr10:905888 Cone7ag0865 Cone-Chr7:6610121 2.20E-198 dispersed
Cone13ag1213 Cone-Chr13:9357152 Cone7ag0865 Cone-Chr7:6610121 1.27E-199 dispersed
Cone19ag1198 Cone-Chr19:8377949 Cone7ag0865 Cone-Chr7:6610121 6.02E-195 dispersed
Cone3ag0203 Cone-Chr3:1052705 Cone7ag0865 Cone-Chr7:6610121 5.99E-198 dispersed
Cone7ag0865 Cone-Chr7:6610121 Cone7ag1292 Cone-Chr7:9521345 8.58E-106 dispersed
Cone4ag1290 Cone-Chr4:10664639 Cone7ag0865 Cone-Chr7:6610121 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83031 PF00083 Sugar_tr 1.60E-97 CL0015 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0865 - - - 0.0