Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0894 | ATGACTTCTAGTAGTACTACTGCTACTCAGACACCTCAGACGTCCACTCCATCTCCACTGTCCACTGACTCCAACCATCATCATGATCGGACGGCCCAGAAAAAGCCGAGGAATCAGCGCCGACCAAGCAGCAGCAGCACCAAAGATCACACGACCAGTAACTATCGAGGCGTCAGAATGCGAAAACTGGGAAAATGGGTCTCGGAAATCAGAGAGCCACGTAAGAAATCCCGCATTTGGCTTGGAACCTTCTCCACAGCAGAGATGGCCGCCAGGGCCTACGACGTTGCCGCCCTTACTGTCAGAGGCGACTCCGCCATCCTCAACTTTCCCGAGCTCGCTCACTTGCTTCCCCGTCCGGCATCGTTTTCTCCATGTGACGTCCAAGCCGCTGCCGCCATGGCTGCTCACATGTTCCAGTTTGACTCCAAGTCATTGCCTGTGACGGCTTCTGCTACAGCAGCGGCTGCTCTTGTGGTTTTGACCGAGTGGGATGATGACGACGGTGAGCTGAGTGAGATTGTCAAGTTGCCGAGTCTTGGCCCGAGTTACAACGAGTCGAATGGGTTCGGCGAAGATCAGTTTGTGTTTGAAGATTGGGTGTGTGAGTATCCGTTCGACGCCATTGTTCCCGAGTATGGAAGATTTTGA | 651 | 53.76 | MTSSSTTATQTPQTSTPSPLSTDSNHHHDRTAQKKPRNQRRPSSSSTKDHTTSNYRGVRMRKLGKWVSEIREPRKKSRIWLGTFSTAEMAARAYDVAALTVRGDSAILNFPELAHLLPRPASFSPCDVQAAAAMAAHMFQFDSKSLPVTASATAAAALVVLTEWDDDDGELSEIVKLPSLGPSYNESNGFGEDQFVFEDWVCEYPFDAIVPEYGRF | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6995942 | 6996592 | - | Conep07aG0092300.1 | Cone7ag0894 | 441490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0894 | 216 | SMART | rav1_2 | 54 | 117 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cone7ag0894 | 216 | PRINTS | Ethylene responsive element binding protein signature | 55 | 66 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | PRINTS | Ethylene responsive element binding protein signature | 77 | 93 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | Pfam | AP2 domain | 53 | 103 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | CDD | AP2 | 53 | 113 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 33 | 187 | IPR051032 | - | |
Cone7ag0894 | 216 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone7ag0894 | 216 | Gene3D | AP2/ERF domain | 54 | 112 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | SUPERFAMILY | DNA-binding domain | 53 | 112 | IPR016177 | GO:0003677(InterPro) | |
Cone7ag0894 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 54 | 111 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag0894 | 216 | FunFam | Ethylene-responsive transcription factor 2 | 53 | 112 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0772 | Cone-Chr4:4457176 | Cone7ag0894 | Cone-Chr7:6995942 | 7.48E-43 | dispersed | |
Cone4ag0949 | Cone-Chr4:8070103 | Cone7ag0894 | Cone-Chr7:6995942 | 3.27E-41 | dispersed | |
Cone7ag0709 | Cone-Chr7:4093784 | Cone7ag0894 | Cone-Chr7:6995942 | 4.18E-42 | dispersed | |
Cone7ag0894 | Cone-Chr7:6995942 | Cone7ag1181 | Cone-Chr7:8804049 | 4.47E-43 | dispersed | |
Cone17ag1123 | Cone-Chr17:8317270 | Cone7ag0894 | Cone-Chr7:6995942 | 2.87E-39 | wgd | |
Cone20ag0599 | Cone-Chr20:3503235 | Cone7ag0894 | Cone-Chr7:6995942 | 3.81E-39 | wgd | |
Cone4ag1240 | Cone-Chr4:10302694 | Cone7ag0894 | Cone-Chr7:6995942 | 1.66E-96 | wgd | |
Cone6ag1474 | Cone-Chr6:11740377 | Cone7ag0894 | Cone-Chr7:6995942 | 1.72E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46507 | PF00071 | Ras | 5.60E-55 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0894 | K09286 | - | csv:101217333 | 166.777 |