Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0909 ATGGATCATCACCACGAAGAAAGGCCTAGTGTTGCTGATGCCTGGAAAAGGCCTTCATCTTCCAAGAATGAACTACCTAACAAGATCTCATCGGAAGAGGAACCATTATCTTTTCAAGACGCCTCTATTCTAGATTTTGGCATTAGCATGGAACCTTTCCATGAATTCAGTCAAACTAACCCAAACACAGATCAGATCAAAATCCCCGATAAAGACGACAGTCAAACAAATCCAACCCTCCGAAACAGTAACAAAATCCAAGACTGGGATCCTCGAGTGATGCTTAACAACCTCTCTTTCCTCAAGCAAAAGATCCATCAACTCCAAGAAGTAGTCCATTTAATTATCGGCCGAAGAACCCAACAAATTCTGGTTCAACCTGATGAGCTTGAAGCTCAACAGCAGCAGCTAATCACAGCCGATCTCACCTCCATTATAGTCCAGCTCATATCTACAGCAGGAAGTCTTCTCCCTTCCATGAAGCATAACCTTTCTACAGTTTCTCCTTCAATTGGGGAGCTTGGACAGCTTGACGGGTCCTTACTTCCATCCGTAATGGGAGGGCCTAGCTCTAGTGTTTTTCCTCCTCAATATAACGAGGTGACCAAAATACATGACCGATCCAACCAGATTAATGAACAAAAATTACAGCACTACCTTGTTGAAGAAAATGAGTTGAAAGAAGAGGAAGATCCAGAAGAAGGTGAGAACCTTCCGCCTGGGTCTTATGAAATCTTGCAACTTGAAAAGGAAGTAATTCTTGCACCTCATACTCATTTTTGCACTATATGTGGGAAAGGGTTCAAAAGGGATGCAAATTTACGTATGCATATGAGAGGCCATGGAGACGAGTATAAAACTCCGGCCGCTCTAGCAAAACCCAATAAAGAATCAAGCTCGGAACCTATGCTCATAAAAAGGTATTCTTGCCCTTATAATGGGTGCAAGAGGAATAAAGATCATAAAAAGTTTCAACCTTTGAAGACCATTTTGTGTGTCAAGAACCATTACAAGAGAACCCATTGTGACAAAAGTTACACTTGTAGCAGATGCAATGTCAAGAAGTTTTCGGTCCTAGCAGATCTTAAAACCCATGAGAAGCATTGTGGTAAGGACAAATGGCTTTGCTCTTGTGGGACCACATTTTCAAGAAAGGACAAGCTTTTCGGGCATATTGCTCTATTCCAAGGACATACTCCAGCTATTCCTCATGATGAATCGAAAGGAACAAGTATGGTGTTAGATAGAGGGGAAGGGAGTGAGGGTAATAAGAACAAAGTTGAGACTTTGAACTTCAGTTTTGGAAGTGGGATTGAACCTATGGTGGATATAAAAGGAGGAGGAGGGGGTATTGATGATCCTACAAGTTATTTCTCGCCGCTAAATTTTGACGGGTGTAATTTTGTAGGGTTTCATGAGTTTCCCCGACCTCCGTTCGAGGACCCGGATAATTCGCTTTCTTTGCTTCTTCAAGGCGCTAGTACCTACTCTCAGAAATCTGGAGCAGAGTCCAGCTCCAATAATCTTGAATGA 1533 42.34 MDHHHEERPSVADAWKRPSSSKNELPNKISSEEEPLSFQDASILDFGISMEPFHEFSQTNPNTDQIKIPDKDDSQTNPTLRNSNKIQDWDPRVMLNNLSFLKQKIHQLQEVVHLIIGRRTQQILVQPDELEAQQQQLITADLTSIIVQLISTAGSLLPSMKHNLSTVSPSIGELGQLDGSLLPSVMGGPSSSVFPPQYNEVTKIHDRSNQINEQKLQHYLVEENELKEEEDPEEGENLPPGSYEILQLEKEVILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPNKESSSEPMLIKRYSCPYNGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCNVKKFSVLADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPHDESKGTSMVLDRGEGSEGNKNKVETLNFSFGSGIEPMVDIKGGGGGIDDPTSYFSPLNFDGCNFVGFHEFPRPPFEDPDNSLSLLLQGASTYSQKSGAESSSNNLE 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7133436 7135833 - Conep07aG0093800.1 Cone7ag0909 441505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0909 510 MobiDBLite consensus disorder prediction 1 36 - -
Cone7ag0909 510 MobiDBLite consensus disorder prediction 487 510 - -
Cone7ag0909 510 Gene3D Classic Zinc Finger 333 403 - -
Cone7ag0909 510 Gene3D Classic Zinc Finger 244 312 - -
Cone7ag0909 510 MobiDBLite consensus disorder prediction 54 85 - -
Cone7ag0909 510 ProSitePatterns Zinc finger C2H2 type domain signature. 261 281 IPR013087 -
Cone7ag0909 510 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 67 487 IPR044300 GO:0010044(InterPro)|GO:0010447(InterPro)
Cone7ag0909 510 MobiDBLite consensus disorder prediction 482 510 - -
Cone7ag0909 510 ProSiteProfiles Zinc finger C2H2 type domain profile. 259 286 IPR013087 -
Cone7ag0909 510 SMART c2h2final6 259 281 IPR013087 -
Cone7ag0909 510 SMART c2h2final6 346 368 IPR013087 -
Cone7ag0909 510 SMART c2h2final6 308 341 IPR013087 -
Cone7ag0909 510 SUPERFAMILY beta-beta-alpha zinc fingers 258 283 IPR036236 -
Cone7ag0909 510 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1329 Cone-Chr11:9776655 Cone7ag0909 Cone-Chr7:7133436 1.38E-68 dispersed
Cone6ag1558 Cone-Chr6:12203413 Cone7ag0909 Cone-Chr7:7133436 4.86E-40 dispersed
Cone7ag0909 Cone-Chr7:7133436 Cone9ag1475 Cone-Chr9:10898256 7.23E-76 dispersed
Cone4ag1226 Cone-Chr4:10224325 Cone7ag0909 Cone-Chr7:7133436 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46509 PF07250 Glyoxal_oxid_N 9.50E-88 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0909 - - - 0.0