Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0932 ATGGACGGCCCGCCAGCAAGCGATTGCTGCTCGATCTGCCATGGAAGCTTCCACGTTCCTTGTCAAGCCAATTGCTCACACTGGTTCTGCGGAAACTGTATAATGCTTGTTTGGGATCATGGATCGCCTCTCCATTCTTGTAAATGTCCCCTATGCCGTCGGACTATTACCCTGCTGGTTCCTAGTGAGGTTTCATTAAGGCAGCAGCATAACCCTGAGGTAGCTGTGATTCTTAGAAAGGTTGAAACTTACAATCGTTATTTTGGTGGGCGCTCCAATGGCCTCAGTCAGCGAGTGCAAGACCTTCCCTTTCTCCTGCAGAGGCTGGTTCGGGAGCTTATGAATCCTCACAGATCTCTTCCTCTTGTCATCAGAGCACGTATTTATTTAGCAATGGCACTAAGTGCGGTTTATATTGTCAGCCCAGTTGATATTATTCCAGAAGCAATATTAGGAATTGTCGGGCTGTTAGATGATGTCCTCATTGCGCTCATTTGCTTTCTCCATGTTGCTGCAATATATCGATCTGTGCTGTATTCCCGACATGGAGGCTCTTGA 558 47.31 MDGPPASDCCSICHGSFHVPCQANCSHWFCGNCIMLVWDHGSPLHSCKCPLCRRTITLLVPSEVSLRQQHNPEVAVILRKVETYNRYFGGRSNGLSQRVQDLPFLLQRLVRELMNPHRSLPLVIRARIYLAMALSAVYIVSPVDIIPEAILGIVGLLDDVLIALICFLHVAAIYRSVLYSRHGGS 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7287574 7290031 - Conep07aG0096100.1 Cone7ag0932 441528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0932 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Cone7ag0932 185 SUPERFAMILY RING/U-box 2 57 - -
Cone7ag0932 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 114 IPR013083 -
Cone7ag0932 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Cone7ag0932 185 SMART ring_2 10 52 IPR001841 -
Cone7ag0932 185 PANTHER UNCHARACTERIZED 3 182 IPR038896 GO:0061630(InterPro)
Cone7ag0932 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1196 Cone-Chr4:10082086 Cone7ag0932 Cone-Chr7:7287574 2.29E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0932 K15707 - cit:102613940 311.227