Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0932 | ATGGACGGCCCGCCAGCAAGCGATTGCTGCTCGATCTGCCATGGAAGCTTCCACGTTCCTTGTCAAGCCAATTGCTCACACTGGTTCTGCGGAAACTGTATAATGCTTGTTTGGGATCATGGATCGCCTCTCCATTCTTGTAAATGTCCCCTATGCCGTCGGACTATTACCCTGCTGGTTCCTAGTGAGGTTTCATTAAGGCAGCAGCATAACCCTGAGGTAGCTGTGATTCTTAGAAAGGTTGAAACTTACAATCGTTATTTTGGTGGGCGCTCCAATGGCCTCAGTCAGCGAGTGCAAGACCTTCCCTTTCTCCTGCAGAGGCTGGTTCGGGAGCTTATGAATCCTCACAGATCTCTTCCTCTTGTCATCAGAGCACGTATTTATTTAGCAATGGCACTAAGTGCGGTTTATATTGTCAGCCCAGTTGATATTATTCCAGAAGCAATATTAGGAATTGTCGGGCTGTTAGATGATGTCCTCATTGCGCTCATTTGCTTTCTCCATGTTGCTGCAATATATCGATCTGTGCTGTATTCCCGACATGGAGGCTCTTGA | 558 | 47.31 | MDGPPASDCCSICHGSFHVPCQANCSHWFCGNCIMLVWDHGSPLHSCKCPLCRRTITLLVPSEVSLRQQHNPEVAVILRKVETYNRYFGGRSNGLSQRVQDLPFLLQRLVRELMNPHRSLPLVIRARIYLAMALSAVYIVSPVDIIPEAILGIVGLLDDVLIALICFLHVAAIYRSVLYSRHGGS | 185 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7287574 | 7290031 | - | Conep07aG0096100.1 | Cone7ag0932 | 441528 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0932 | 185 | ProSitePatterns | Zinc finger RING-type signature. | 25 | 34 | IPR017907 | - | |
Cone7ag0932 | 185 | SUPERFAMILY | RING/U-box | 2 | 57 | - | - | |
Cone7ag0932 | 185 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 114 | IPR013083 | - | |
Cone7ag0932 | 185 | ProSiteProfiles | Zinc finger RING-type profile. | 10 | 53 | IPR001841 | - | |
Cone7ag0932 | 185 | SMART | ring_2 | 10 | 52 | IPR001841 | - | |
Cone7ag0932 | 185 | PANTHER | UNCHARACTERIZED | 3 | 182 | IPR038896 | GO:0061630(InterPro) | |
Cone7ag0932 | 185 | Pfam | Protein of unknown function (DUF1232) | 130 | 164 | IPR010652 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1196 | Cone-Chr4:10082086 | Cone7ag0932 | Cone-Chr7:7287574 | 2.29E-91 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0932 | K15707 | - | cit:102613940 | 311.227 |