Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0959 | ATGGGCAGCATCTGCTCAAAAGAGTCGCCAGAACCAGAGAAAAGCAACAACGACAACATCAGTAGGGAAAATGAGCTCAACAAGTCTTCAGTTCAATTGGTTGCTCCTGCTGATGTTTTGACAGAAGATTTCATTGTAGAGGTTAAAGGTGATGTCTCAGTTATTCCCTTATCAAGGCAGGCTTCACAGGCCAATGTCAATTCTTCTGTTCATCAAAGAAAGCAAAATCTGCAAATTATACTATCAAAGGATCTTGAAGAAGAGAGTAATAAGAAGAGGATATCTCGTTTGTCCAATCCGAGCGATGGTGACGTGTCGGGTTGGCCCTCCTGGTTAGCTTCAGTTGCTGGCGATGTCATCCAAGGGTGGGTCCCTCGTCAGGCAGACTCATTTGAGAAGTTAGGCAAAATTGGACAGGGAACTTACAGCAGTGTATACAAGGCTCGAGATCTTGTAACTGGTAAAATTGTAGCGTTGAAGAAGGTTAGATTTGTAAATATGGATCCAGAAAGTGTCCGGTTCATGGCTAGAGAAATCTACATTTTGCGTAAACTTGATCATCCAAACATTATAAAGCTCGAGGGTTTAGTCACTTCAAGAGTATCTTCCAGCTTATACCTTGTTTTTGAGTACATGGAACATGACCTGGCTGGACTAGCAGCAGCTCCTACTGTCAAGTTTACAGAATCTCAGATTAAATGCTATATGCAACAGTTGTTACATGGGCTGGAGCACTGCCATTCACGGGGCGTGCTGCATAGAGACATTAAGGGGTCGAATCTTCTGATTGATAATAATGGGGTACTTAAGATTGGGGACTTTGGATTAGCTACCCTTTTTGACCCTGATCAAAACCAGCCTTTAACAAGCAGGGTTGTGACTCTATGGTATAGAGCACCTGAGCTCTTGCTTGGTTCTACTGAGTATGGAGCTGCTATCGATCTTTGGAGCTATGGTTGCATTCTAGCTGAGCTGTTTGTGGGAAAGCCGATAATGCCCGGAAGAACAGAGGTCGAACAAATGCATAAGATATTCAAGTTGTGTGGTTCACCTCCAGAAGATTACTGGAAAAAAACTAAATTACCTTTAGCAACTAGTTTCAAACCACAACAACCCTACAAGAGCCGTCTAGCCGATATGTTCAGGAACATTTCTCCTTCTGCTTTTGATCTTATAGAAAGCCTCCTTTCCATTCAACCCGAGGATAGAGGATCAGCTAGGTCCGCACTTGGAAGTAAGTTTTTCAAAACTGAACCTCTCCCTTGTGACCCAAAAAGTCTGCCTAAATATCCTCCAAGCAAGGAGTTTGATGCCAAGCTTCGAGAGGAGGAAGCAAAAAGGAAAAAAGCGGATACAGTTAATCGCCGTGGTCCTGAATCAGCTAGAAGAGGCTCAAGAGACTCTAAGCTGGTAAGAACACCAGAATACAATACAGCAGGAGATATCCGATTGCAGGGACAAGCAAATCCTAAGACTGTTAGTCATAAACTGAATCCTCAAGAGGATGGTGGGTCCGGGTTTACTATGGTGGCCCCTAGTGGAGCTATGAGAAATGGATACACACATTCTAGTTCCATGGTTCACTCCTCAGGATCGACTTGGACTAAACCATCCAGGCCCGCTAGAACAAATGAAGAGTTAAGGGCACTGAGTTCTGTGAAGGCTCAACCTCTATCAGACCTGTCCGTCCCTTCTATACAGAAAGATGATAGAGATTCGGACCAAGGTTCCGGACCGGGTTATAGAAGGAATAATAGGATCCATCACTCAGGACCGTTGGTTCCGCCTGGAAGTAACATGGAAGATATGCTTAAGGAGCATGAGAGACTGATGCAACAGGCTTTCCGGAAAGCCCGTTTGGACAAACACCAACAGAAACTAGGCTAG | 1887 | 44.3 | MGSICSKESPEPEKSNNDNISRENELNKSSVQLVAPADVLTEDFIVEVKGDVSVIPLSRQASQANVNSSVHQRKQNLQIILSKDLEEESNKKRISRLSNPSDGDVSGWPSWLASVAGDVIQGWVPRQADSFEKLGKIGQGTYSSVYKARDLVTGKIVALKKVRFVNMDPESVRFMAREIYILRKLDHPNIIKLEGLVTSRVSSSLYLVFEYMEHDLAGLAAAPTVKFTESQIKCYMQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATLFDPDQNQPLTSRVVTLWYRAPELLLGSTEYGAAIDLWSYGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPPEDYWKKTKLPLATSFKPQQPYKSRLADMFRNISPSAFDLIESLLSIQPEDRGSARSALGSKFFKTEPLPCDPKSLPKYPPSKEFDAKLREEEAKRKKADTVNRRGPESARRGSRDSKLVRTPEYNTAGDIRLQGQANPKTVSHKLNPQEDGGSGFTMVAPSGAMRNGYTHSSSMVHSSGSTWTKPSRPARTNEELRALSSVKAQPLSDLSVPSIQKDDRDSDQGSGPGYRRNNRIHHSGPLVPPGSNMEDMLKEHERLMQQAFRKARLDKHQQKLG | 628 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7453099 | 7455948 | - | Conep07aG0098800.1 | Cone7ag0959 | 441555 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0959 | 628 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0959 | 628 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Cone7ag0959 | 628 | MobiDBLite | consensus disorder prediction | 517 | 540 | - | - | |
Cone7ag0959 | 628 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0959 | 628 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0959 | 628 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 423 | IPR011009 | - | |
Cone7ag0959 | 628 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone7ag0959 | 628 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Cone7ag0959 | 628 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0959 | 628 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0959 | 628 | PANTHER | CELL DIVISION PROTEIN KINASE | 130 | 415 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cone7ag0959 | 628 | FunFam | probable serine/threonine-protein kinase At1g54610 | 214 | 455 | - | - | |
Cone7ag0959 | 628 | FunFam | probable serine/threonine-protein kinase At1g54610 | 118 | 213 | - | - | |
Cone7ag0959 | 628 | MobiDBLite | consensus disorder prediction | 443 | 470 | - | - | |
Cone7ag0959 | 628 | MobiDBLite | consensus disorder prediction | 443 | 601 | - | - | |
Cone7ag0959 | 628 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 455 | - | - | |
Cone7ag0959 | 628 | MobiDBLite | consensus disorder prediction | 480 | 501 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag1312 | Cone-Chr6:10524238 | Cone7ag0959 | Cone-Chr7:7453099 | 1.68E-144 | dispersed | |
Cone7ag0959 | Cone-Chr7:7453099 | Cone9ag0171 | Cone-Chr9:760275 | 7.51E-207 | dispersed | |
Cone4ag1171 | Cone-Chr4:9962722 | Cone7ag0959 | Cone-Chr7:7453099 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83040 | PF00320 | GATA | 1.30E-16 | CL0167 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0959 | K08819 | - | csv:101208709 | 783.867 |