Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0959 ATGGGCAGCATCTGCTCAAAAGAGTCGCCAGAACCAGAGAAAAGCAACAACGACAACATCAGTAGGGAAAATGAGCTCAACAAGTCTTCAGTTCAATTGGTTGCTCCTGCTGATGTTTTGACAGAAGATTTCATTGTAGAGGTTAAAGGTGATGTCTCAGTTATTCCCTTATCAAGGCAGGCTTCACAGGCCAATGTCAATTCTTCTGTTCATCAAAGAAAGCAAAATCTGCAAATTATACTATCAAAGGATCTTGAAGAAGAGAGTAATAAGAAGAGGATATCTCGTTTGTCCAATCCGAGCGATGGTGACGTGTCGGGTTGGCCCTCCTGGTTAGCTTCAGTTGCTGGCGATGTCATCCAAGGGTGGGTCCCTCGTCAGGCAGACTCATTTGAGAAGTTAGGCAAAATTGGACAGGGAACTTACAGCAGTGTATACAAGGCTCGAGATCTTGTAACTGGTAAAATTGTAGCGTTGAAGAAGGTTAGATTTGTAAATATGGATCCAGAAAGTGTCCGGTTCATGGCTAGAGAAATCTACATTTTGCGTAAACTTGATCATCCAAACATTATAAAGCTCGAGGGTTTAGTCACTTCAAGAGTATCTTCCAGCTTATACCTTGTTTTTGAGTACATGGAACATGACCTGGCTGGACTAGCAGCAGCTCCTACTGTCAAGTTTACAGAATCTCAGATTAAATGCTATATGCAACAGTTGTTACATGGGCTGGAGCACTGCCATTCACGGGGCGTGCTGCATAGAGACATTAAGGGGTCGAATCTTCTGATTGATAATAATGGGGTACTTAAGATTGGGGACTTTGGATTAGCTACCCTTTTTGACCCTGATCAAAACCAGCCTTTAACAAGCAGGGTTGTGACTCTATGGTATAGAGCACCTGAGCTCTTGCTTGGTTCTACTGAGTATGGAGCTGCTATCGATCTTTGGAGCTATGGTTGCATTCTAGCTGAGCTGTTTGTGGGAAAGCCGATAATGCCCGGAAGAACAGAGGTCGAACAAATGCATAAGATATTCAAGTTGTGTGGTTCACCTCCAGAAGATTACTGGAAAAAAACTAAATTACCTTTAGCAACTAGTTTCAAACCACAACAACCCTACAAGAGCCGTCTAGCCGATATGTTCAGGAACATTTCTCCTTCTGCTTTTGATCTTATAGAAAGCCTCCTTTCCATTCAACCCGAGGATAGAGGATCAGCTAGGTCCGCACTTGGAAGTAAGTTTTTCAAAACTGAACCTCTCCCTTGTGACCCAAAAAGTCTGCCTAAATATCCTCCAAGCAAGGAGTTTGATGCCAAGCTTCGAGAGGAGGAAGCAAAAAGGAAAAAAGCGGATACAGTTAATCGCCGTGGTCCTGAATCAGCTAGAAGAGGCTCAAGAGACTCTAAGCTGGTAAGAACACCAGAATACAATACAGCAGGAGATATCCGATTGCAGGGACAAGCAAATCCTAAGACTGTTAGTCATAAACTGAATCCTCAAGAGGATGGTGGGTCCGGGTTTACTATGGTGGCCCCTAGTGGAGCTATGAGAAATGGATACACACATTCTAGTTCCATGGTTCACTCCTCAGGATCGACTTGGACTAAACCATCCAGGCCCGCTAGAACAAATGAAGAGTTAAGGGCACTGAGTTCTGTGAAGGCTCAACCTCTATCAGACCTGTCCGTCCCTTCTATACAGAAAGATGATAGAGATTCGGACCAAGGTTCCGGACCGGGTTATAGAAGGAATAATAGGATCCATCACTCAGGACCGTTGGTTCCGCCTGGAAGTAACATGGAAGATATGCTTAAGGAGCATGAGAGACTGATGCAACAGGCTTTCCGGAAAGCCCGTTTGGACAAACACCAACAGAAACTAGGCTAG 1887 44.3 MGSICSKESPEPEKSNNDNISRENELNKSSVQLVAPADVLTEDFIVEVKGDVSVIPLSRQASQANVNSSVHQRKQNLQIILSKDLEEESNKKRISRLSNPSDGDVSGWPSWLASVAGDVIQGWVPRQADSFEKLGKIGQGTYSSVYKARDLVTGKIVALKKVRFVNMDPESVRFMAREIYILRKLDHPNIIKLEGLVTSRVSSSLYLVFEYMEHDLAGLAAAPTVKFTESQIKCYMQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATLFDPDQNQPLTSRVVTLWYRAPELLLGSTEYGAAIDLWSYGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPPEDYWKKTKLPLATSFKPQQPYKSRLADMFRNISPSAFDLIESLLSIQPEDRGSARSALGSKFFKTEPLPCDPKSLPKYPPSKEFDAKLREEEAKRKKADTVNRRGPESARRGSRDSKLVRTPEYNTAGDIRLQGQANPKTVSHKLNPQEDGGSGFTMVAPSGAMRNGYTHSSSMVHSSGSTWTKPSRPARTNEELRALSSVKAQPLSDLSVPSIQKDDRDSDQGSGPGYRRNNRIHHSGPLVPPGSNMEDMLKEHERLMQQAFRKARLDKHQQKLG 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7453099 7455948 - Conep07aG0098800.1 Cone7ag0959 441555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0959 628 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0959 628 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Cone7ag0959 628 MobiDBLite consensus disorder prediction 517 540 - -
Cone7ag0959 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0959 628 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524(InterPro)
Cone7ag0959 628 SUPERFAMILY Protein kinase-like (PK-like) 124 423 IPR011009 -
Cone7ag0959 628 MobiDBLite consensus disorder prediction 1 21 - -
Cone7ag0959 628 CDD STKc_CDK9_like 131 415 - -
Cone7ag0959 628 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0959 628 SMART serkin_6 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0959 628 PANTHER CELL DIVISION PROTEIN KINASE 130 415 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone7ag0959 628 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Cone7ag0959 628 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Cone7ag0959 628 MobiDBLite consensus disorder prediction 443 470 - -
Cone7ag0959 628 MobiDBLite consensus disorder prediction 443 601 - -
Cone7ag0959 628 Gene3D Transferase(Phosphotransferase) domain 1 214 455 - -
Cone7ag0959 628 MobiDBLite consensus disorder prediction 480 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1312 Cone-Chr6:10524238 Cone7ag0959 Cone-Chr7:7453099 1.68E-144 dispersed
Cone7ag0959 Cone-Chr7:7453099 Cone9ag0171 Cone-Chr9:760275 7.51E-207 dispersed
Cone4ag1171 Cone-Chr4:9962722 Cone7ag0959 Cone-Chr7:7453099 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83040 PF00320 GATA 1.30E-16 CL0167 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0959 K08819 - csv:101208709 783.867