Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1007 ATGACCGGATCCGGTTCTCCATGCGGAGCCTGCAAATTCTTGAGGAGAAAATGTATCAGGGGTTGTGTTTTTGCGCCATATTTCTGCCATGATCAAGGAGCTACCCATTTTGCAGCCATCCACAAGGTTTTTGGAGCTAGCAATGTCTCGAAGCTGCTTGCTCACCTTCCAGTTAGTGACCGTTGTGAAGCGGCAGTGACAATTGCATATGAAGCTCAAGCTAGGGTTCAAGATCCAATTTATGGATGTGTTTCTCATATTTTTGCGCTCCAACAACAGGTTGTGAATTTGCAGGTTCAACTAGCTTCTCTCAAAGATCAAGCAGCAAAAAGCATGCTAATTGATAGCTCCTGTAGTTCAGGAAATCCTAGCGACAAAACCTATGGGAAACTTACTTCTTACCCAAATCATGATCTACAAAGTTTAGTTCCATCACAATATACAAACATGTTGCCTCAGCAAAATCAAAGTCTCACCAACAATACATACCTGATGCCATACTATGATAACAACAACAACGGTATGGAGTCACAGTATATGAGAAATTATGGAAATTCAATCACTCTAGATGAAAACATTTCATATGGAAGCTTTGAAGAGACTTCATATTCTAACCAAACGAACAGTATTCGTGGACGGACCTTCCAAGATTCCGATTATCTTCAATCCGTGGCTTTCGGGTACATTCAGTCGTAG 696 41.38 MTGSGSPCGACKFLRRKCIRGCVFAPYFCHDQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTIAYEAQARVQDPIYGCVSHIFALQQQVVNLQVQLASLKDQAAKSMLIDSSCSSGNPSDKTYGKLTSYPNHDLQSLVPSQYTNMLPQQNQSLTNNTYLMPYYDNNNNGMESQYMRNYGNSITLDENISYGSFEETSYSNQTNSIRGRTFQDSDYLQSVAFGYIQS 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7769199 7769989 + Conep07aG0103600.1 Cone7ag1007 441603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1007 231 Coils Coil 87 107 - -
Cone7ag1007 231 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Cone7ag1007 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 224 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cone7ag1007 231 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1007 Cone-Chr7:7769199 Cone8ag1587 Cone-Chr8:11808670 3.63E-32 dispersed
Cone7ag1007 Cone-Chr7:7769199 Cone7ag1008 Cone-Chr7:7775944 4.63E-54 tandem
Cone4ag1123 Cone-Chr4:9704353 Cone7ag1007 Cone-Chr7:7769199 5.74E-63 transposed
Cone4ag1122 Cone-Chr4:9698498 Cone7ag1007 Cone-Chr7:7769199 1.33E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46517 PF00166 Cpn10 1.90E-27 CL0296 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1007 K13945 - vvi:100266975 278.485